FFCP PHASE1:Mm9::chr1:93397379..93397436,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1321 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:93397379..93397436,+ | |||
|description=CAGE_peak_at_chr1:93397379..93397436,+ | |description=CAGE_peak_at_chr1:93397379..93397436,+ | ||
|id=chr1:93397379..93397436,+ | |id=chr1:93397379..93397436,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!6.83e-10!63;UBERON:0003056!2.01e-09!49;UBERON:0000025!4.51e-09!114;UBERON:0000955!6.69e-09!50;UBERON:0006238!6.69e-09!50;UBERON:0002616!1.13e-08!49;UBERON:0007811!2.05e-08!86;UBERON:0002346!2.05e-08!71;UBERON:0003075!2.05e-08!71;UBERON:0007284!2.05e-08!71;UBERON:0002791!3.24e-08!29;UBERON:0003528!3.24e-08!29;UBERON:0001893!3.24e-08!29;UBERON:0001049!6.58e-08!52;UBERON:0005068!6.58e-08!52;UBERON:0006241!6.58e-08!52;UBERON:0007135!6.58e-08!52;UBERON:0004111!8.65e-08!122;UBERON:0002020!8.77e-08!34;UBERON:0003080!1.02e-07!40;UBERON:0002780!1.11e-07!39;UBERON:0001890!1.11e-07!39;UBERON:0006240!1.11e-07!39;UBERON:0000475!1.26e-07!200;UBERON:0000153!1.89e-07!94;UBERON:0002021!6.02e-07!10;UBERON:0000411!6.02e-07!10;UBERON:0001950!6.02e-07!10 | |ontology_enrichment_uberon=UBERON:0000033!6.83e-10!63;UBERON:0003056!2.01e-09!49;UBERON:0000025!4.51e-09!114;UBERON:0000955!6.69e-09!50;UBERON:0006238!6.69e-09!50;UBERON:0002616!1.13e-08!49;UBERON:0007811!2.05e-08!86;UBERON:0002346!2.05e-08!71;UBERON:0003075!2.05e-08!71;UBERON:0007284!2.05e-08!71;UBERON:0002791!3.24e-08!29;UBERON:0003528!3.24e-08!29;UBERON:0001893!3.24e-08!29;UBERON:0001049!6.58e-08!52;UBERON:0005068!6.58e-08!52;UBERON:0006241!6.58e-08!52;UBERON:0007135!6.58e-08!52;UBERON:0004111!8.65e-08!122;UBERON:0002020!8.77e-08!34;UBERON:0003080!1.02e-07!40;UBERON:0002780!1.11e-07!39;UBERON:0001890!1.11e-07!39;UBERON:0006240!1.11e-07!39;UBERON:0000475!1.26e-07!200;UBERON:0000153!1.89e-07!94;UBERON:0002021!6.02e-07!10;UBERON:0000411!6.02e-07!10;UBERON:0001950!6.02e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,7.98e-10,29;UBERON:0002791,7.98e-10,29;UBERON:0001893,7.98e-10,29;UBERON:0003056,3.25e-09,49;UBERON:0002021,3.32e-09,10;UBERON:0000411,3.32e-09,10;UBERON:0001950,3.32e-09,10;UBERON:0002020,3.69e-09,34;UBERON:0002346,3.76e-09,64;UBERON:0003075,3.76e-09,64;UBERON:0007284,3.76e-09,64;UBERON:0000073,1.54e-08,54;UBERON:0002780,7.09e-08,39;UBERON:0001890,7.09e-08,39;UBERON:0006240,7.09e-08,39;UBERON:0001049,8.92e-08,52;UBERON:0005068,8.92e-08,52;UBERON:0006241,8.92e-08,52;UBERON:0007135,8.92e-08,52;UBERON:0000955,9.31e-08,47;UBERON:0006238,9.31e-08,47;UBERON:0000025,9.81e-08,114;UBERON:0002616,1.78e-07,46;UBERON:0003080,1.79e-07,40;UBERON:0010371,5.00e-07,73 | |||
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| ||
|short_description=p@chr1:93397379..93397436,+ | |short_description=p@chr1:93397379..93397436,+ | ||
}} | }} |
Latest revision as of 05:11, 6 August 2015
Short description: | p@chr1:93397379..93397436, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:93397379..93397436, + |
Coexpression cluster: | MCL_coexpression_mm9:1321 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brain grey matter | 7.98e-10 | 29 |
regional part of telencephalon | 7.98e-10 | 29 |
telencephalon | 7.98e-10 | 29 |
pre-chordal neural plate | 3.25e-09 | 49 |
occipital lobe | 3.32e-09 | 10 |
visual cortex | 3.32e-09 | 10 |
neocortex | 3.32e-09 | 10 |
gray matter | 3.69e-09 | 34 |
neurectoderm | 3.76e-09 | 64 |
neural plate | 3.76e-09 | 64 |
presumptive neural plate | 3.76e-09 | 64 |
regional part of nervous system | 1.54e-08 | 54 |
regional part of forebrain | 7.09e-08 | 39 |
forebrain | 7.09e-08 | 39 |
future forebrain | 7.09e-08 | 39 |
neural tube | 8.92e-08 | 52 |
neural rod | 8.92e-08 | 52 |
future spinal cord | 8.92e-08 | 52 |
neural keel | 8.92e-08 | 52 |
brain | 9.31e-08 | 47 |
future brain | 9.31e-08 | 47 |
tube | 9.81e-08 | 114 |
regional part of brain | 1.78e-07 | 46 |
anterior neural tube | 1.79e-07 | 40 |
ecto-epithelium | 5.00e-07 | 73 |