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FFCP PHASE1:Mm9::chr13:55577550..55577573,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr13:55577550..55577573,-
|description=CAGE_peak_at_chr13:55577550..55577573,-
|description=CAGE_peak_at_chr13:55577550..55577573,-
|id=chr13:55577550..55577573,-
|id=chr13:55577550..55577573,-
|ontology_enrichment_celltype=CL:0000221!7.08e-18!44;CL:0000133!7.08e-18!44;CL:0002319!9.76e-18!43;CL:0000055!1.43e-17!50;CL:0000393!1.81e-14!39;CL:0000211!1.81e-14!39;CL:0000540!6.91e-14!33;CL:0000047!6.91e-14!33;CL:0000031!6.91e-14!33;CL:0000404!6.91e-14!33;CL:0000117!1.03e-13!23;CL:0000337!1.03e-13!23;CL:0002321!8.45e-08!70;CL:0000220!8.45e-08!70
|ontology_enrichment_celltype_v019_2=CL:0000117,2.59e-31,23;CL:0000337,2.59e-31,23;CL:0002319,7.11e-26,43;CL:0000221,3.97e-25,44;CL:0000133,3.97e-25,44;CL:0000540,1.72e-22,33;CL:0000047,1.72e-22,33;CL:0000031,1.72e-22,33;CL:0000404,1.72e-22,33;CL:0000393,3.08e-20,39;CL:0000211,3.08e-20,39;CL:0002321,1.29e-14,70;CL:0002609,2.05e-12,6;CL:0000723,1.32e-09,91;CL:0000048,1.32e-09,91;CL:0000034,1.34e-08,97;CL:0000120,2.69e-07,3;CL:0002613,2.96e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.52e-27!73;UBERON:0005743!1.52e-27!73;UBERON:0000073!2.70e-27!75;UBERON:0001016!2.70e-27!75;UBERON:0004121!2.36e-21!102;UBERON:0000924!2.36e-21!102;UBERON:0006601!2.36e-21!102;UBERON:0001049!2.48e-19!52;UBERON:0005068!2.48e-19!52;UBERON:0006241!2.48e-19!52;UBERON:0007135!2.48e-19!52;UBERON:0002346!1.02e-18!71;UBERON:0003075!1.02e-18!71;UBERON:0007284!1.02e-18!71;UBERON:0002020!1.45e-18!34;UBERON:0000955!2.79e-18!50;UBERON:0006238!2.79e-18!50;UBERON:0002616!8.81e-18!49;UBERON:0000033!4.30e-16!63;UBERON:0002791!3.22e-15!29;UBERON:0003528!3.22e-15!29;UBERON:0001893!3.22e-15!29;UBERON:0002780!7.94e-15!39;UBERON:0001890!7.94e-15!39;UBERON:0006240!7.94e-15!39;UBERON:0003080!8.00e-15!40;UBERON:0003056!1.86e-14!49;UBERON:0000956!9.12e-13!21;UBERON:0001869!9.12e-13!21;UBERON:0000203!9.12e-13!21;UBERON:0002619!2.06e-10!17;UBERON:0000153!7.19e-08!94;UBERON:0007811!3.84e-07!86;UBERON:0002021!4.31e-07!10;UBERON:0000411!4.31e-07!10;UBERON:0001950!4.31e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.96e-31,34;UBERON:0001017,2.49e-29,73;UBERON:0001016,2.63e-28,75;UBERON:0000073,9.12e-26,54;UBERON:0001049,2.38e-23,52;UBERON:0005068,2.38e-23,52;UBERON:0006241,2.38e-23,52;UBERON:0007135,2.38e-23,52;UBERON:0003528,4.02e-23,29;UBERON:0002791,4.02e-23,29;UBERON:0001893,4.02e-23,29;UBERON:0004121,8.55e-22,95;UBERON:0000924,8.55e-22,95;UBERON:0006601,8.55e-22,95;UBERON:0000956,1.16e-20,21;UBERON:0001869,1.16e-20,21;UBERON:0000203,1.16e-20,21;UBERON:0002346,4.68e-19,64;UBERON:0003075,4.68e-19,64;UBERON:0007284,4.68e-19,64;UBERON:0002780,1.78e-17,39;UBERON:0001890,1.78e-17,39;UBERON:0006240,1.78e-17,39;UBERON:0002616,3.17e-17,46;UBERON:0003080,6.68e-17,40;UBERON:0000955,9.91e-17,47;UBERON:0006238,9.91e-17,47;UBERON:0002619,1.78e-16,17;UBERON:0010371,8.61e-16,73;UBERON:0002021,3.48e-14,10;UBERON:0000411,3.48e-14,10;UBERON:0001950,3.48e-14,10;UBERON:0003056,3.65e-14,49;UBERON:0010314,3.85e-12,92;UBERON:0001948,6.33e-10,5;UBERON:0002315,6.33e-10,5;UBERON:0000025,1.61e-08,114;UBERON:0002240,3.40e-08,6;UBERON:0005174,3.40e-08,6;UBERON:0001137,3.40e-08,6;UBERON:0004111,1.72e-07,122;UBERON:0003076,4.16e-07,12;UBERON:0003057,4.16e-07,12;UBERON:0011216,9.44e-07,194
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0.183546752161682,1.56478268869608,1.74420125104357,0.439372365468944,0.972149495371417,0.839918529752175,1.43752564364972,0,0,0,2.31533492432352,0.286533439938757,0.515672092277442,2.42779753031517,4.7609188134483,2.53532561402472,1.0165335962074,0.889294796111139,0.449949858640699,2.96659908770092,0,1.79760066311043,3.45796474789399,2.59224030771194,8.37036817656482,2.52389953621658,2.28520787523043,1.98781686856452,1.34739879136449,4.2172007248024,1.83843757322004,1.10115880999389,1.14918604276669,0.921639199537461,2.1101806036831,5.85520919055422,2.6045668527838,1.67509799400829,0,0.30559649555362,1.47314292736834,2.42031857358475,1.86399445825301,0.302904773332736,0.0755715601067855,0,0,0,0,0,0,0,0.511290967734173,0,1.06001872353102,0.422530259330042,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.148442139064825,0.693941307064543,0,0.230615497256059,0.150722640552623,0.352766121407114,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.299581278809645,0.915001205637253,0.879580464790051,0.521472960576829,0.511430914660661,0.41557608911912,0.324482526135515,0,0,0,0,0.260240885925407,1.14951052216736,0.900310649026746,0.60281927134286,0.136072998302656,0.512454881139399,0.187403449119458,0,0.646703978798527,1.13463648100692,0.527853372491847,1.09597866213787,0,0.348252166522167,0.205782136407943,1.19420560091096,0,0,0,0.414251545071004,0,0.720248245844059,0.473489471170421,0.393528463494808,0.462801338662135,0,0,0.116765342367169,0,0.32833492815819,0,0,0,0,0.841159794256509,1.23485534855141,0,0,0.426576501070468,1.16118335930219,0.644337306610467,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0.948339504765408,0.571242563048644,0,0.610953983535943,0.775809948670503,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0,0,2.87536413054709,0,0,0,0,0,0,0.568474235311454,0.814824882210129,0,0.234690248288502,0,0,0.195133647857799,0.315270288212382,0,0.318909537314974,0.327726629431476,0,0.289298117163023,0,0,0.491764273019036,0,0.642202359951168,0.117211686592203,0,0,0.315508219416257,0.780877488593277,0.646270193198397,0.477937595905104,0.891194696329576,0.283076530788832,2.02405350837447,0.876767573733936,0,0.963963949265421,0,0.178065603667255,0,0.164970122972535,0,0.971122544619926,0.302323556964751,0,0.590603785761546,0.307435147943927,0,0,0,0,0,0,0,0.540183282093931,0.646793418913773,0.214337035031592,0.532020700926821,1.07021290561242,0.493647061806363,0,0.23467170806371,0.21183207086382,0,0,0,0,0.119372344003136,0,0,0.18542530201051,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.790839983952838,0.203319467126849,0.432021363287205,0,0.218362563746178,0,0.0826534557253359,0.523511883968059,0.129614973291793,0,0,0.598066184175915,0,0.194451188344048,0.516639293910924,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0.221985953374065,0.0897138566094757,0.335769232728157,0,0.187682475451182,0.183151624267265,0,0,0.564751842617067,2.30162618253588,2.86447756719698,1.20297227640581,4.11049511862385,1.5107877947794,1.35004500046361,1.80128481289688,1.81256963593682,1.03552062350364,0.518936737920883,1.59609949360412,0.853668028770671,0.486213434136588,0.209613162627982,0.367687016900028,0.44449345560323,0.412070114477788,0.320919209591815,0,0,0.754505365544305,0.187283014939765,0.576226371643824,0.287177344778066,0,0.231768651889711,0.38581844092741,0.824171801606613,0.883193520806384,0.685738504770831,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.338458431566706,0.365855945745545,0,0.271608227691724,0.561142271657738,0.237270036248348,0.197008964751127,0.409231043169689,0.309873682371932,0.771626443924566,0.749431733813838,0.701794825336225,0.214871054048298,0.765153328275374,0,0.463735671240843
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0.183546752161682,1.56478268869608,1.74420125104357,0.439372365468944,0.972149495371417,0.839918529752175,1.43752564364972,0,0,0,2.31533492432352,0.286533439938757,0.515672092277442,2.42779753031517,4.7609188134483,2.53532561402472,1.0165335962074,0.889294796111139,0.449949858640699,2.96659908770092,0,1.79760066311043,3.45796474789399,2.59224030771194,8.37036817656482,2.52389953621658,2.28520787523043,1.98781686856452,1.34739879136449,4.2172007248024,1.83843757322004,1.10115880999389,1.14918604276669,0.921639199537461,2.1101806036831,5.85520919055422,2.6045668527838,1.67509799400829,0,0.30559649555362,1.47314292736834,2.42031857358475,1.86399445825301,0.302904773332736,0.0755715601067855,0,0,0,0,0,0,0,0.511290967734173,0,1.06001872353102,0.422530259330042,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.148442139064825,0.693941307064543,0,0.230615497256059,0.150722640552623,0.352766121407114,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.299581278809645,0.915001205637253,0.879580464790051,0.521472960576829,0.511430914660661,0.41557608911912,0.324482526135515,0,0,0,0,0.260240885925407,1.14951052216736,0.900310649026746,0.60281927134286,0.136072998302656,0.512454881139399,0.187403449119458,0,0.646703978798527,1.13463648100692,0.527853372491847,1.09597866213787,0,0.348252166522167,0.205782136407943,1.19420560091096,0,0,0,0.414251545071004,0,0.720248245844059,0.473489471170421,0.393528463494808,0.462801338662135,0,0,0.116765342367169,0,0.32833492815819,0,0,0,0,0.841159794256509,1.23485534855141,0,0,0.426576501070468,1.16118335930219,0.644337306610467,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0.948339504765408,0.571242563048644,0,0.610953983535943,0.775809948670503,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0,0,2.87536413054709,0,0,0,0,0,0,0.568474235311454,0.814824882210129,0,0.234690248288502,0,0,0.195133647857799,0.315270288212382,0,0.318909537314974,0.327726629431476,0,0.289298117163023,0,0,0.491764273019036,0,0.642202359951168,0.117211686592203,0,0,0.315508219416257,0.780877488593277,0.646270193198397,0.477937595905104,0.891194696329576,0.283076530788832,2.02405350837447,0.876767573733936,0,0.963963949265421,0,0.178065603667255,0,0.164970122972535,0,0.971122544619926,0.302323556964751,0,0.590603785761546,0.307435147943927,0,0,0,0,0,0,0,0.540183282093931,0.646793418913773,0.214337035031592,0.532020700926821,1.07021290561242,0.493647061806363,0,0.23467170806371,0.21183207086382,0,0,0,0,0.119372344003136,0,0,0.18542530201051,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.790839983952838,0.203319467126849,0.432021363287205,0,0.218362563746178,0,0.0826534557253359,0.523511883968059,0.129614973291793,0,0,0.598066184175915,0,0.194451188344048,0.516639293910924,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0.221985953374065,0.0897138566094757,0.335769232728157,0,0.187682475451182,0.183151624267265,0,0,0.564751842617067,2.30162618253588,2.86447756719698,1.20297227640581,4.11049511862385,1.5107877947794,1.35004500046361,1.80128481289688,1.81256963593682,1.03552062350364,0.518936737920883,1.59609949360412,0.853668028770671,0.486213434136588,0.209613162627982,0.367687016900028,0.44449345560323,0.412070114477788,0.320919209591815,0,0,0.754505365544305,0.187283014939765,0.576226371643824,0.287177344778066,0,0.231768651889711,0.38581844092741,0.824171801606613,0.883193520806384,0.685738504770831,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.338458431566706,0.365855945745545,0,0.271608227691724,0.561142271657738,0.237270036248348,0.197008964751127,0.409231043169689,0.309873682371932,0.771626443924566,0.749431733813838,0.701794825336225,0.214871054048298,0.765153328275374,0,0.463735671240843
|short_description=p@chr13:55577550..55577573,-
|short_description=p@chr13:55577550..55577573,-
}}
}}

Latest revision as of 04:00, 6 August 2015

Short description:p@chr13:55577550..55577573, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr13:55577550..55577573, -
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p@chr13:55577550..55577573-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.59
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.37
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.22
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.86
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G11.23
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter2.96e-3134
central nervous system2.49e-2973
nervous system2.63e-2875
regional part of nervous system9.12e-2654
neural tube2.38e-2352
neural rod2.38e-2352
future spinal cord2.38e-2352
neural keel2.38e-2352
brain grey matter4.02e-2329
regional part of telencephalon4.02e-2329
telencephalon4.02e-2329
ectoderm-derived structure8.55e-2295
ectoderm8.55e-2295
presumptive ectoderm8.55e-2295
cerebral cortex1.16e-2021
cerebral hemisphere1.16e-2021
pallium1.16e-2021
neurectoderm4.68e-1964
neural plate4.68e-1964
presumptive neural plate4.68e-1964
regional part of forebrain1.78e-1739
forebrain1.78e-1739
future forebrain1.78e-1739
regional part of brain3.17e-1746
anterior neural tube6.68e-1740
brain9.91e-1747
future brain9.91e-1747
regional part of cerebral cortex1.78e-1617
ecto-epithelium8.61e-1673
occipital lobe3.48e-1410
visual cortex3.48e-1410
neocortex3.48e-1410
pre-chordal neural plate3.65e-1449
structure with developmental contribution from neural crest3.85e-1292
regional part of spinal cord6.33e-105
gray matter of spinal cord6.33e-105
tube1.61e-08114
spinal cord3.40e-086
dorsal region element3.40e-086
dorsum3.40e-086
anatomical conduit1.72e-07122
posterior neural tube4.16e-0712
chordal neural plate4.16e-0712
organ system subdivision9.44e-07194
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