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FFCP PHASE1:Mm9::chr16:20535508..20535512,+: Difference between revisions

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{{FFCP|EntrezGene=11773|HGNC=|UniProt=Q3TWV4|association_with_transcript=-38bp_to_ENSMUST00000090023_5end|description=CAGE_peak_3_at_Ap2m1_5end|id=chr16:20535508..20535512,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,6.51e-09,3;CL:0000351,6.51e-09,3;CL:0002614,1.51e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.87e-11!52;UBERON:0005068!1.87e-11!52;UBERON:0006241!1.87e-11!52;UBERON:0007135!1.87e-11!52;UBERON:0000955!2.99e-10!50;UBERON:0006238!2.99e-10!50;UBERON:0002346!6.15e-10!71;UBERON:0003075!6.15e-10!71;UBERON:0007284!6.15e-10!71;UBERON:0002616!8.62e-10!49;UBERON:0000073!3.11e-09!75;UBERON:0001016!3.11e-09!75;UBERON:0001017!3.47e-09!73;UBERON:0005743!3.47e-09!73;UBERON:0002020!5.06e-09!34;UBERON:0000033!1.32e-08!63;UBERON:0004121!1.76e-08!102;UBERON:0000924!1.76e-08!102;UBERON:0006601!1.76e-08!102;UBERON:0003080!2.28e-08!40;UBERON:0002780!7.90e-08!39;UBERON:0001890!7.90e-08!39;UBERON:0006240!7.90e-08!39;UBERON:0003056!1.18e-07!49;UBERON:0002791!1.94e-07!29;UBERON:0003528!1.94e-07!29;UBERON:0001893!1.94e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.16e-12,54;UBERON:0001017,3.09e-11,73;UBERON:0002950,4.89e-11,4;UBERON:0001891,4.89e-11,4;UBERON:0009616,4.89e-11,4;UBERON:0010286,4.89e-11,4;UBERON:0002420,4.95e-11,8;UBERON:0007245,4.95e-11,8;UBERON:0010009,4.95e-11,8;UBERON:0010011,4.95e-11,8;UBERON:0000454,4.95e-11,8;UBERON:0001016,8.20e-11,75;UBERON:0001049,8.38e-11,52;UBERON:0005068,8.38e-11,52;UBERON:0006241,8.38e-11,52;UBERON:0007135,8.38e-11,52;UBERON:0002616,2.05e-09,46;UBERON:0000955,3.80e-09,47;UBERON:0006238,3.80e-09,47;UBERON:0000358,6.51e-09,3;UBERON:0000307,6.51e-09,3;UBERON:0007010,6.51e-09,3;UBERON:0002038,1.51e-08,3;UBERON:0009663,1.51e-08,3;UBERON:0009661,1.51e-08,3;UBERON:0000125,1.51e-08,3;UBERON:0002308,1.51e-08,3;UBERON:0004121,1.68e-08,95;UBERON:0000924,1.68e-08,95;UBERON:0006601,1.68e-08,95;UBERON:0003080,4.37e-08,40;UBERON:0002346,4.42e-08,64;UBERON:0003075,4.42e-08,64;UBERON:0007284,4.42e-08,64;UBERON:0002780,6.12e-07,39;UBERON:0001890,6.12e-07,39;UBERON:0006240,6.12e-07,39;UBERON:0002020,7.83e-07,34;UBERON:0003528,8.47e-07,29;UBERON:0002791,8.47e-07,29;UBERON:0001893,8.47e-07,29|phase1_expression=0,0,0,0.60492842261366,0,0,0.233612640595526,0,0.281577444303333,0,0.171217968225505,0,0,0.0874204024189974,0,0,0,0,0.137114433605739,0,0,0.0992909512008853,0,0.319984845586813,0.22940928106717,0,0.430761996159075,0.215471232685889,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0.659058548203415,0.58328969722285,0.699932108126813,0,0,0,0.672187598284928,0.771778308107841,0.286533439938757,0,1.21389876515759,0,0.633831403506179,1.35537812827653,1.77858959222228,0,0,0,1.19840044207362,0.384218305321555,0.311068836925433,0.405017814995072,0,0.571301968807607,0.441737081903227,0.367472397644862,0.287536413054709,0,0,2.80912143787413,2.30409799884365,0.395658863190582,1.00636407962651,0.52091337055676,1.3959149950069,2.25105044012672,1.5279824777681,1.76777151284201,0.711858403995515,0.372798891650601,0.227178579999552,0.302286240427142,0,0,0,0.539703191637817,0.649776417447669,0,0.280888840263504,0.340860645156116,0.779358013808606,0.35333957451034,0.14084341977668,1.28326477414318,2.54805239706646,0,0.865964164044856,0.506719730950197,0,0.22836775943812,0,0,1.04091196059682,0.913396434936424,0.461230994512117,0.150722640552623,0.23517741427141,0.125666591329675,1.23597483867187,0,0,0.161766849947409,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0.381210681219194,2.09706895166752,2.28750301409313,1.13088916901578,0.869121600961382,2.30143911597297,1.66230435647648,1.94689515681309,0,0,0.252722758433675,0,0.520481771850815,0.229902104433473,0.180062129805349,0.150704817835715,0.680364991513279,0,0.0937017245597288,0.776110112217047,0.215567992932842,0.189106080167819,0.175951124163949,0.43839146485515,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0.540186184383045,0.473489471170421,0,0.308534225774757,0,0.804820204198858,0.116765342367169,0.329119699826961,0.164167464079095,0.243206428637567,0.146199987425332,0.219550115291051,0.134206418760372,1.47202963994889,0.92614151141356,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0.898819408654221,0.216138049874694,0.199141273254367,0.379335801906163,0.456994050438915,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.0632365371242573,0.147610147979602,0.156998727841375,0.246794327843601,0,0.667380422864376,0.589676985339609,0,0,0.482354319504834,0.50925170356284,0.287696137450811,0,0,1.43768206527355,0,0.624075346229121,0,0.896987067609561,0.482443521363367,0.369506380333209,0.568474235311454,0.325929952884052,0.509235257325564,0.234690248288502,0,0.238043640886014,0,0,0.44292937929755,0.478364305972461,0,0.172684981865896,0,0,0,0,0.275936746304732,1.76605648986571,3.16471553798949,0,0.252470927204373,0.315508219416257,0,0,0,0,0,0,0.29225585791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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:11773
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q3TWV4
|association_with_transcript=-38bp_to_ENSMUST00000090023_5end
|cluster_id=chr16:20535508..20535512,+
|description=CAGE_peak_3_at_Ap2m1_5end
|id=chr16:20535508..20535512,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000349,6.51e-09,3;CL:0000351,6.51e-09,3;CL:0002614,1.51e-08,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.87e-11!52;UBERON:0005068!1.87e-11!52;UBERON:0006241!1.87e-11!52;UBERON:0007135!1.87e-11!52;UBERON:0000955!2.99e-10!50;UBERON:0006238!2.99e-10!50;UBERON:0002346!6.15e-10!71;UBERON:0003075!6.15e-10!71;UBERON:0007284!6.15e-10!71;UBERON:0002616!8.62e-10!49;UBERON:0000073!3.11e-09!75;UBERON:0001016!3.11e-09!75;UBERON:0001017!3.47e-09!73;UBERON:0005743!3.47e-09!73;UBERON:0002020!5.06e-09!34;UBERON:0000033!1.32e-08!63;UBERON:0004121!1.76e-08!102;UBERON:0000924!1.76e-08!102;UBERON:0006601!1.76e-08!102;UBERON:0003080!2.28e-08!40;UBERON:0002780!7.90e-08!39;UBERON:0001890!7.90e-08!39;UBERON:0006240!7.90e-08!39;UBERON:0003056!1.18e-07!49;UBERON:0002791!1.94e-07!29;UBERON:0003528!1.94e-07!29;UBERON:0001893!1.94e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.16e-12,54;UBERON:0001017,3.09e-11,73;UBERON:0002950,4.89e-11,4;UBERON:0001891,4.89e-11,4;UBERON:0009616,4.89e-11,4;UBERON:0010286,4.89e-11,4;UBERON:0002420,4.95e-11,8;UBERON:0007245,4.95e-11,8;UBERON:0010009,4.95e-11,8;UBERON:0010011,4.95e-11,8;UBERON:0000454,4.95e-11,8;UBERON:0001016,8.20e-11,75;UBERON:0001049,8.38e-11,52;UBERON:0005068,8.38e-11,52;UBERON:0006241,8.38e-11,52;UBERON:0007135,8.38e-11,52;UBERON:0002616,2.05e-09,46;UBERON:0000955,3.80e-09,47;UBERON:0006238,3.80e-09,47;UBERON:0000358,6.51e-09,3;UBERON:0000307,6.51e-09,3;UBERON:0007010,6.51e-09,3;UBERON:0002038,1.51e-08,3;UBERON:0009663,1.51e-08,3;UBERON:0009661,1.51e-08,3;UBERON:0000125,1.51e-08,3;UBERON:0002308,1.51e-08,3;UBERON:0004121,1.68e-08,95;UBERON:0000924,1.68e-08,95;UBERON:0006601,1.68e-08,95;UBERON:0003080,4.37e-08,40;UBERON:0002346,4.42e-08,64;UBERON:0003075,4.42e-08,64;UBERON:0007284,4.42e-08,64;UBERON:0002780,6.12e-07,39;UBERON:0001890,6.12e-07,39;UBERON:0006240,6.12e-07,39;UBERON:0002020,7.83e-07,34;UBERON:0003528,8.47e-07,29;UBERON:0002791,8.47e-07,29;UBERON:0001893,8.47e-07,29
|phase1_expression=0,0,0,0.60492842261366,0,0,0.233612640595526,0,0.281577444303333,0,0.171217968225505,0,0,0.0874204024189974,0,0,0,0,0.137114433605739,0,0,0.0992909512008853,0,0.319984845586813,0.22940928106717,0,0.430761996159075,0.215471232685889,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0.659058548203415,0.58328969722285,0.699932108126813,0,0,0,0.672187598284928,0.771778308107841,0.286533439938757,0,1.21389876515759,0,0.633831403506179,1.35537812827653,1.77858959222228,0,0,0,1.19840044207362,0.384218305321555,0.311068836925433,0.405017814995072,0,0.571301968807607,0.441737081903227,0.367472397644862,0.287536413054709,0,0,2.80912143787413,2.30409799884365,0.395658863190582,1.00636407962651,0.52091337055676,1.3959149950069,2.25105044012672,1.5279824777681,1.76777151284201,0.711858403995515,0.372798891650601,0.227178579999552,0.302286240427142,0,0,0,0.539703191637817,0.649776417447669,0,0.280888840263504,0.340860645156116,0.779358013808606,0.35333957451034,0.14084341977668,1.28326477414318,2.54805239706646,0,0.865964164044856,0.506719730950197,0,0.22836775943812,0,0,1.04091196059682,0.913396434936424,0.461230994512117,0.150722640552623,0.23517741427141,0.125666591329675,1.23597483867187,0,0,0.161766849947409,0,0,0,0.292780797011547,0.83778682725382,0,0,0,0.381210681219194,2.09706895166752,2.28750301409313,1.13088916901578,0.869121600961382,2.30143911597297,1.66230435647648,1.94689515681309,0,0,0.252722758433675,0,0.520481771850815,0.229902104433473,0.180062129805349,0.150704817835715,0.680364991513279,0,0.0937017245597288,0.776110112217047,0.215567992932842,0.189106080167819,0.175951124163949,0.43839146485515,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0.540186184383045,0.473489471170421,0,0.308534225774757,0,0.804820204198858,0.116765342367169,0.329119699826961,0.164167464079095,0.243206428637567,0.146199987425332,0.219550115291051,0.134206418760372,1.47202963994889,0.92614151141356,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0.898819408654221,0.216138049874694,0.199141273254367,0.379335801906163,0.456994050438915,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.0632365371242573,0.147610147979602,0.156998727841375,0.246794327843601,0,0.667380422864376,0.589676985339609,0,0,0.482354319504834,0.50925170356284,0.287696137450811,0,0,1.43768206527355,0,0.624075346229121,0,0.896987067609561,0.482443521363367,0.369506380333209,0.568474235311454,0.325929952884052,0.509235257325564,0.234690248288502,0,0.238043640886014,0,0,0.44292937929755,0.478364305972461,0,0.172684981865896,0,0,0,0,0.275936746304732,1.76605648986571,3.16471553798949,0,0.252470927204373,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,0.963963949265421,0.141940085208269,0.534196811001766,0.325773918707152,0,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0.720244376125241,0.129358683782755,0,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,0.469343416127421,1.69465656691056,0.441056796109924,0,0,0.0603129249281559,0.238744688006273,0.492422699235184,0,3.33765543618917,0,0.412773735926445,0.370389054739423,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,0.316335993581135,0.406638934253697,0.324016022465404,0.627264888043406,0,0,0.165306911450672,0,0.129614973291793,0,1.12738587736838,0.448549638131936,0.165458490457098,0.388902376688095,0.258319646955462,0,0,0.2604087696879,0.524296722128554,1.93267296660805,0.288030006257865,0,0.405450430580328,0.410843828659309,0,0.537080087002444,0,0,0.443068581523732,0,0.15241361331,0.100826185136841,0.38983152295901,0.288635524920988,0.116876902181569,0.453460767230423,1.77588762699252,1.79427713218951,2.18250001273302,0.19318959403219,0.187682475451182,0.36630324853453,0.214368379079066,0.501572104035363,0.564751842617067,0,1.14579102687879,0.859265911718438,1.37016503954128,0,0.675022500231806,0.45032120322422,0.453142408984205,1.03552062350364,0.726511433089237,0,0.682934423016537,0.243106717068294,0,0.367687016900028,0.222246727801615,0.412070114477788,0,0.505394423527595,0.25347929989024,0.565879024158229,0.187283014939765,0.128050304809739,0.229741875822453,0.476293691283074,0.579421629724277,0.578727661391115,0,0,0.342869252385415,0,0.238436189947321,0.436039249896986,0.376437521661322,0.25384382367503,0.182927972872773,0,0.271608227691724,0.561142271657738,0.355905054372522,0.394017929502254,0,0,0,0,0,0,0.57386499620653,0.220591419119515,0.231867835620421
|short_description=p3@Ap2m1
}}

Revision as of 03:59, 6 August 2015

Short description:p3@Ap2m1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ap2m1_5end
Coexpression cluster:NA
Association with transcript: -38bp_to_ENSMUST00000090023_5end
EntrezGene:11773
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ap2m1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.81
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A42.10
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.77
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.34
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.78
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.79
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.18
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
extraembryonic cell6.51e-093
trophoblast cell6.51e-093
neuron of the substantia nigra1.51e-083

Uber anatomy
Ontology termp-valuen
regional part of nervous system8.16e-1254
central nervous system3.09e-1173
regional part of midbrain4.89e-114
midbrain4.89e-114
presumptive midbrain4.89e-114
midbrain neural tube4.89e-114
basal ganglion4.95e-118
nuclear complex of neuraxis4.95e-118
aggregate regional part of brain4.95e-118
collection of basal ganglia4.95e-118
cerebral subcortex4.95e-118
nervous system8.20e-1175
neural tube8.38e-1152
neural rod8.38e-1152
future spinal cord8.38e-1152
neural keel8.38e-1152
regional part of brain2.05e-0946
brain3.80e-0947
future brain3.80e-0947
blastocyst6.51e-093
blastula6.51e-093
cleaving embryo6.51e-093
substantia nigra1.51e-083
telencephalic nucleus1.51e-083
midbrain nucleus1.51e-083
neural nucleus1.51e-083
nucleus of brain1.51e-083
ectoderm-derived structure1.68e-0895
ectoderm1.68e-0895
presumptive ectoderm1.68e-0895
anterior neural tube4.37e-0840
neurectoderm4.42e-0864
neural plate4.42e-0864
presumptive neural plate4.42e-0864
regional part of forebrain6.12e-0739
forebrain6.12e-0739
future forebrain6.12e-0739
gray matter7.83e-0734
brain grey matter8.47e-0729
regional part of telencephalon8.47e-0729
telencephalon8.47e-0729
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