FFCP PHASE1:Mm9::chr8:125952310..125952320,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=342 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:125952310..125952320,+ | |||
|description=CAGE_peak_at_chr8:125952310..125952320,+ | |description=CAGE_peak_at_chr8:125952310..125952320,+ | ||
|id=chr8:125952310..125952320,+ | |id=chr8:125952310..125952320,+ | ||
|ontology_enrichment_celltype=CL:0002092!1.37e-27!3;CL:0002540!1.37e-27!3;CL:0002453!8.11e-27!8;CL:0000333!1.65e-21!10;CL:0000095!1.65e-21!10;CL:0000243!1.65e-21!10;CL:0000123!1.65e-21!10;CL:0000125!1.65e-21!10;CL:0000030!1.65e-21!10;CL:0000339!1.65e-21!10;CL:0000864!2.38e-18!2;CL:0000878!2.38e-18!2;CL:0000129!2.38e-18!2;CL:0000128!2.23e-13!6;CL:0000126!2.23e-13!6;CL:0000127!2.23e-13!6;CL:0002494!5.52e-13!3;CL:0000737!5.52e-13!3;CL:0000746!5.52e-13!3;CL:0000513!5.52e-13!3;CL:0000219!5.59e-10!54;CL:0002194!1.15e-09!4;CL:0000766!1.15e-09!4;CL:0000576!1.15e-09!4;CL:0000235!1.15e-09!4;CL:0002009!1.15e-09!4;CL:0000040!1.15e-09!4;CL:0000559!1.15e-09!4;CL:0000055!2.93e-08!50;CL:0000548!3.98e-07!115;CL:0000004!3.98e-07!115;CL:0000255!3.98e-07!115;CL:0000680!6.12e-07!6;CL:0000183!6.12e-07!6;CL:0000187!6.12e-07!6;CL:0000056!6.12e-07!6;CL:0002371!6.28e-07!118;CL:0000144!9.70e-07!121;CL:0000012!9.70e-07!121 | |ontology_enrichment_celltype=CL:0002092!1.37e-27!3;CL:0002540!1.37e-27!3;CL:0002453!8.11e-27!8;CL:0000333!1.65e-21!10;CL:0000095!1.65e-21!10;CL:0000243!1.65e-21!10;CL:0000123!1.65e-21!10;CL:0000125!1.65e-21!10;CL:0000030!1.65e-21!10;CL:0000339!1.65e-21!10;CL:0000864!2.38e-18!2;CL:0000878!2.38e-18!2;CL:0000129!2.38e-18!2;CL:0000128!2.23e-13!6;CL:0000126!2.23e-13!6;CL:0000127!2.23e-13!6;CL:0002494!5.52e-13!3;CL:0000737!5.52e-13!3;CL:0000746!5.52e-13!3;CL:0000513!5.52e-13!3;CL:0000219!5.59e-10!54;CL:0002194!1.15e-09!4;CL:0000766!1.15e-09!4;CL:0000576!1.15e-09!4;CL:0000235!1.15e-09!4;CL:0002009!1.15e-09!4;CL:0000040!1.15e-09!4;CL:0000559!1.15e-09!4;CL:0000055!2.93e-08!50;CL:0000548!3.98e-07!115;CL:0000004!3.98e-07!115;CL:0000255!3.98e-07!115;CL:0000680!6.12e-07!6;CL:0000183!6.12e-07!6;CL:0000187!6.12e-07!6;CL:0000056!6.12e-07!6;CL:0002371!6.28e-07!118;CL:0000144!9.70e-07!121;CL:0000012!9.70e-07!121 | ||
|ontology_enrichment_celltype_v019_2=CL:0002092,2.79e-38,3;CL:0002540,2.79e-38,3;CL:0000878,3.19e-25,2;CL:0000129,3.19e-25,2;CL:0002494,8.93e-18,3;CL:0000737,8.93e-18,3;CL:0000746,8.93e-18,3;CL:0000513,8.93e-18,3;CL:0002194,3.67e-13,4;CL:0000766,3.67e-13,4;CL:0000234,3.67e-13,4;CL:0000576,3.67e-13,4;CL:0000235,3.67e-13,4;CL:0000864,3.67e-13,4;CL:0002009,3.67e-13,4;CL:0000040,3.67e-13,4;CL:0000559,3.67e-13,4;CL:0000680,2.15e-09,6;CL:0000187,2.15e-09,6;CL:0000056,2.15e-09,6;CL:0000222,3.49e-08,7;CL:0000473,6.16e-08,7;CL:0000557,6.16e-08,7;CL:0002320,4.64e-07,46;CL:0000134,4.64e-07,46;CL:0002453,4.66e-07,8;CL:0000723,7.08e-07,91;CL:0000048,7.08e-07,91 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.29e-14!16;UBERON:0002204!2.04e-13!32;UBERON:0001474!3.26e-10!22;UBERON:0004765!3.26e-10!22;UBERON:0001434!3.26e-10!22 | |ontology_enrichment_uberon=UBERON:0002371!5.29e-14!16;UBERON:0002204!2.04e-13!32;UBERON:0001474!3.26e-10!22;UBERON:0004765!3.26e-10!22;UBERON:0001434!3.26e-10!22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.00e-19,16;UBERON:0002204,2.74e-19,32;UBERON:0001474,1.85e-14,22;UBERON:0004765,1.85e-14,22;UBERON:0001434,1.85e-14,22;UBERON:0002390,3.26e-07,45;UBERON:0003061,3.26e-07,45;UBERON:0003081,3.43e-07,87;UBERON:0002384,4.64e-07,46;UBERON:0002193,8.96e-07,48;UBERON:0002405,8.96e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.219686182734472,0,0.279972843250725,0,0,0,0,4.88792928468299,0,14.9544906760458,0,0,0,0,0,12.1486461832989,8.89979726310277,7.104801149461,4.49400165777607,4.61061966385865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.219686182734472,0,0.279972843250725,0,0,0,0,4.88792928468299,0,14.9544906760458,0,0,0,0,0,12.1486461832989,8.89979726310277,7.104801149461,4.49400165777607,4.61061966385865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:125952310..125952320,+ | |short_description=p@chr8:125952310..125952320,+ | ||
}} | }} |
Latest revision as of 02:41, 6 August 2015
Short description: | p@chr8:125952310..125952320, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:125952310..125952320, + |
Coexpression cluster: | MCL_coexpression_mm9:342 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 2.79e-38 | 3 |
mesenchymal stem cell of the bone marrow | 2.79e-38 | 3 |
central nervous system macrophage | 3.19e-25 | 2 |
microglial cell | 3.19e-25 | 2 |
cardiocyte | 8.93e-18 | 3 |
striated muscle cell | 8.93e-18 | 3 |
cardiac muscle cell | 8.93e-18 | 3 |
cardiac muscle myoblast | 8.93e-18 | 3 |
monopoietic cell | 3.67e-13 | 4 |
myeloid leukocyte | 3.67e-13 | 4 |
phagocyte | 3.67e-13 | 4 |
monocyte | 3.67e-13 | 4 |
macrophage | 3.67e-13 | 4 |
tissue-resident macrophage | 3.67e-13 | 4 |
macrophage dendritic cell progenitor | 3.67e-13 | 4 |
monoblast | 3.67e-13 | 4 |
promonocyte | 3.67e-13 | 4 |
muscle precursor cell | 2.15e-09 | 6 |
muscle cell | 2.15e-09 | 6 |
myoblast | 2.15e-09 | 6 |
mesodermal cell | 3.49e-08 | 7 |
defensive cell | 6.16e-08 | 7 |
granulocyte monocyte progenitor cell | 6.16e-08 | 7 |
connective tissue cell | 4.64e-07 | 46 |
mesenchymal cell | 4.64e-07 | 46 |
oligodendrocyte precursor cell | 4.66e-07 | 8 |
somatic stem cell | 7.08e-07 | 91 |
multi fate stem cell | 7.08e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.00e-19 | 16 |
musculoskeletal system | 2.74e-19 | 32 |
bone element | 1.85e-14 | 22 |
skeletal element | 1.85e-14 | 22 |
skeletal system | 1.85e-14 | 22 |
hematopoietic system | 3.26e-07 | 45 |
blood island | 3.26e-07 | 45 |
lateral plate mesoderm | 3.43e-07 | 87 |
connective tissue | 4.64e-07 | 46 |
hemolymphoid system | 8.96e-07 | 48 |
immune system | 8.96e-07 | 48 |