FFCP PHASE1:Mm9::chr13:52678109..52678128,+: Difference between revisions
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{{FFCP|EntrezGene=20963|HGNC=|MCL_coexpression_id=18|UniProt=P48025|association_with_transcript=-413bp_to_ENSMUST00000120135_5end|description=CAGE_peak_7_at_Syk_5end|id=chr13:52678109..52678128,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000553,4.33e-15,6;CL:0000556,4.33e-15,6;CL:0000050,8.85e-10,9;CL:0000839,1.95e-08,13;CL:0002027,5.94e-08,3;CL:0002006,5.94e-08,3;CL:0002024,5.94e-08,3;CL:0000049,6.49e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001474,2.81e-11,22;UBERON:0004765,2.81e-11,22;UBERON:0001434,2.81e-11,22;UBERON:0002204,1.02e-09,32;UBERON:0002371,1.69e-08,16;UBERON:0002106,5.79e-07,6;UBERON:0004457,5.79e-07,6;UBERON:0000042,5.79e-07,6;UBERON:0004854,5.79e-07,6;UBERON:0009034,5.79e-07,6;UBERON:0002095,5.79e-07,6;UBERON:0004782,5.79e-07,6;UBERON:0003281,5.79e-07,6;UBERON:0009664,5.79e-07,6;UBERON:0002296,5.79e-07,6;UBERON:0005602,5.79e-07,6;UBERON:0001179,5.79e-07,6;UBERON:0006293,5.79e-07,6|phase1_expression=0,0.348975407639361,0.454999239389536,0,0,0.33575854382378,0.467225281191051,0.129123323441576,0,0,0,0,0,0,3.99731714178795,5.66930748691513,2.79824751251259,28.0761327168832,29.4796032252338,34.3755617956405,0.255129870453209,1.29078236561151,0.261199789138935,0.47997726838022,0.68822784320151,0.57423196411502,1.29228598847722,0.430942465371778,0,0,0.443461021310609,0,0,0,0,0,0,1.25559489221072,0.7813353445238,1.0470474879476,0.588231488031014,4.09827290975067,0.971020706062307,0.125896817975577,0.202753862439029,0.550640256485045,0,0.218025156380447,1.09843091367236,0.194429899074283,0,0,44.2946079992424,0,0,0,0.286533439938757,0,0,0,0,0,0,1.3498495759221,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0.151143120213571,0,0,0,0,0,0,1.82577746171277,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0,0,0.5709193985953,6.99132285847364,0.148442139064825,0,0,0,0,0.117588707135705,0.125666591329675,0.247194967734374,1.44599356919912,3.5384422077995,0.485300549842228,5.96272099843063,4.363877278217,1.86391761218122,0,0,0.510914110417183,1.31796636956512,0.599902730993408,0.762421362438388,0,0,0,0.173824320192276,0.255715457330331,0,0,0.101839363850316,6.59356944233493,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.852490498186778,0.207125772535502,0,0.180062061461015,0,0,0.154267112887378,0,0.268273401399619,0,0.658239399653922,0.164167464079095,0.405344047729279,0.438599962275997,1.75640092232841,0.536825675041487,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0.398282546508734,0.189667900953082,0.114248512609729,0,0,0,0,0.316182685621286,0.147610147979602,0,0.246794327843601,0.296452627087149,0.333690211432188,0.393117990226406,0,0.608580364165509,0.241177159752417,0,0.863088412352432,3.72911021582581,0.823684239564244,0,0,0.312037673114561,0.505157755894224,0.179397413521912,0,2.77129785249907,0.189491411770485,0,0,0,0.167506257441816,0,0.195133647857799,0.315270288212382,0.44292937929755,0.956728611944923,1.3109065177259,3.10832967358612,1.73578870297814,0,1.08781136763742,0,0.827810238914197,0.160550589987792,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0,0.164970122972535,1.32745138339963,0,0,0,0,0,0,0,0.356497378384721,0,1.05418608574999,0,0,0.18006109403131,0.129358683782755,0,0,0.178368817602071,0,0.304464949114599,0,0,0,0.65954501176592,0,0.422190474497091,0.716234064018819,0.820704498725306,0.291480836629851,0,5.46786818553129,0.619160603889667,0.555583582109135,3.20226376907975,9.70529016819279,8.23601423543482,0.509935289981566,0.559805809294632,1.24379976423981,0,0,0.203319467126849,0,0,0,0.269728692769641,0.247960367176008,0.523511883968059,0.259229946583586,1.86401793926078,0,0,0,0,0,0.337912250981556,0.469428954583016,0.13020438484395,0,0,0,0.316011120628178,0.405450430580328,0.308132871494482,0.129920822977795,0,0,0,0.443068581523732,0.302899349844443,0.457240839929999,0,0.292373642219257,0.481059208201647,0.584384510907845,0.680191150845634,0,0,0.167884616364078,0,0.375364950902364,0,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0,0,0.263069711437843,0.135804113845862,1.12228454331548,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0.429742108096597,0,0.441182838239031,1.62307484934295|short_description=p7@Syk}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20963 | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P48025 | |||
|association_with_transcript=-413bp_to_ENSMUST00000120135_5end | |||
|cluster_id=chr13:52678109..52678128,+ | |||
|description=CAGE_peak_7_at_Syk_5end | |||
|id=chr13:52678109..52678128,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,4.33e-15,6;CL:0000556,4.33e-15,6;CL:0000050,8.85e-10,9;CL:0000839,1.95e-08,13;CL:0002027,5.94e-08,3;CL:0002006,5.94e-08,3;CL:0002024,5.94e-08,3;CL:0000049,6.49e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,2.81e-11,22;UBERON:0004765,2.81e-11,22;UBERON:0001434,2.81e-11,22;UBERON:0002204,1.02e-09,32;UBERON:0002371,1.69e-08,16;UBERON:0002106,5.79e-07,6;UBERON:0004457,5.79e-07,6;UBERON:0000042,5.79e-07,6;UBERON:0004854,5.79e-07,6;UBERON:0009034,5.79e-07,6;UBERON:0002095,5.79e-07,6;UBERON:0004782,5.79e-07,6;UBERON:0003281,5.79e-07,6;UBERON:0009664,5.79e-07,6;UBERON:0002296,5.79e-07,6;UBERON:0005602,5.79e-07,6;UBERON:0001179,5.79e-07,6;UBERON:0006293,5.79e-07,6 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0,0,0.33575854382378,0.467225281191051,0.129123323441576,0,0,0,0,0,0,3.99731714178795,5.66930748691513,2.79824751251259,28.0761327168832,29.4796032252338,34.3755617956405,0.255129870453209,1.29078236561151,0.261199789138935,0.47997726838022,0.68822784320151,0.57423196411502,1.29228598847722,0.430942465371778,0,0,0.443461021310609,0,0,0,0,0,0,1.25559489221072,0.7813353445238,1.0470474879476,0.588231488031014,4.09827290975067,0.971020706062307,0.125896817975577,0.202753862439029,0.550640256485045,0,0.218025156380447,1.09843091367236,0.194429899074283,0,0,44.2946079992424,0,0,0,0.286533439938757,0,0,0,0,0,0,1.3498495759221,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0.151143120213571,0,0,0,0,0,0,1.82577746171277,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0,0,0.5709193985953,6.99132285847364,0.148442139064825,0,0,0,0,0.117588707135705,0.125666591329675,0.247194967734374,1.44599356919912,3.5384422077995,0.485300549842228,5.96272099843063,4.363877278217,1.86391761218122,0,0,0.510914110417183,1.31796636956512,0.599902730993408,0.762421362438388,0,0,0,0.173824320192276,0.255715457330331,0,0,0.101839363850316,6.59356944233493,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.852490498186778,0.207125772535502,0,0.180062061461015,0,0,0.154267112887378,0,0.268273401399619,0,0.658239399653922,0.164167464079095,0.405344047729279,0.438599962275997,1.75640092232841,0.536825675041487,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0.398282546508734,0.189667900953082,0.114248512609729,0,0,0,0,0.316182685621286,0.147610147979602,0,0.246794327843601,0.296452627087149,0.333690211432188,0.393117990226406,0,0.608580364165509,0.241177159752417,0,0.863088412352432,3.72911021582581,0.823684239564244,0,0,0.312037673114561,0.505157755894224,0.179397413521912,0,2.77129785249907,0.189491411770485,0,0,0,0.167506257441816,0,0.195133647857799,0.315270288212382,0.44292937929755,0.956728611944923,1.3109065177259,3.10832967358612,1.73578870297814,0,1.08781136763742,0,0.827810238914197,0.160550589987792,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0,0.164970122972535,1.32745138339963,0,0,0,0,0,0,0,0.356497378384721,0,1.05418608574999,0,0,0.18006109403131,0.129358683782755,0,0,0.178368817602071,0,0.304464949114599,0,0,0,0.65954501176592,0,0.422190474497091,0.716234064018819,0.820704498725306,0.291480836629851,0,5.46786818553129,0.619160603889667,0.555583582109135,3.20226376907975,9.70529016819279,8.23601423543482,0.509935289981566,0.559805809294632,1.24379976423981,0,0,0.203319467126849,0,0,0,0.269728692769641,0.247960367176008,0.523511883968059,0.259229946583586,1.86401793926078,0,0,0,0,0,0.337912250981556,0.469428954583016,0.13020438484395,0,0,0,0.316011120628178,0.405450430580328,0.308132871494482,0.129920822977795,0,0,0,0.443068581523732,0.302899349844443,0.457240839929999,0,0.292373642219257,0.481059208201647,0.584384510907845,0.680191150845634,0,0,0.167884616364078,0,0.375364950902364,0,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0,0,0.263069711437843,0.135804113845862,1.12228454331548,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0.429742108096597,0,0.441182838239031,1.62307484934295 | |||
|short_description=p7@Syk | |||
}} |
Revision as of 02:38, 6 August 2015
Short description: | p7@Syk |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Syk_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | -413bp_to_ENSMUST00000120135_5end |
EntrezGene: | 20963 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 4.33e-15 | 6 |
megakaryocyte | 4.33e-15 | 6 |
megakaryocyte-erythroid progenitor cell | 8.85e-10 | 9 |
myeloid lineage restricted progenitor cell | 1.95e-08 | 13 |
CD9-positive, CD41-positive megakaryocyte cell | 5.94e-08 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 5.94e-08 | 3 |
Kit-positive megakaryocyte progenitor cell | 5.94e-08 | 3 |
common myeloid progenitor | 6.49e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
bone element | 2.81e-11 | 22 |
skeletal element | 2.81e-11 | 22 |
skeletal system | 2.81e-11 | 22 |
musculoskeletal system | 1.02e-09 | 32 |
bone marrow | 1.69e-08 | 16 |
spleen | 5.79e-07 | 6 |
cavity lining | 5.79e-07 | 6 |
serous membrane | 5.79e-07 | 6 |
gastrointestinal system mesentery | 5.79e-07 | 6 |
stomach region | 5.79e-07 | 6 |
mesentery | 5.79e-07 | 6 |
gastrointestinal system serosa | 5.79e-07 | 6 |
mesentery of stomach | 5.79e-07 | 6 |
gut mesentery | 5.79e-07 | 6 |
dorsal mesentery | 5.79e-07 | 6 |
dorsal mesogastrium | 5.79e-07 | 6 |
peritoneal cavity | 5.79e-07 | 6 |
spleen primordium | 5.79e-07 | 6 |