Personal tools

FFCP PHASE1:Mm9::chr3:130813736..130813752,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=16842|HGNC=|UniProt=P27782,D3Z654,Q8BGZ9,Q3TYB0|association_with_transcript=347bp_to_ENSMUST00000029611,ENSMUST00000066849,ENSMUST00000106341,NM_010703,uc008rjf.1,uc008rjg.1_5end|description=CAGE_peak_3_at_Lef1_5end|id=chr3:130813736..130813752,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000065!4.98e-10!41;UBERON:0001004!2.19e-09!42;UBERON:0000153!2.40e-08!94;UBERON:0006562!3.98e-07!24;UBERON:0001557!3.98e-07!24;UBERON:0001042!3.98e-07!24;UBERON:0008814!3.98e-07!24;UBERON:0009145!3.98e-07!24;UBERON:0002370!8.05e-07!23;UBERON:0000974!8.05e-07!23;UBERON:0004807!8.05e-07!23;UBERON:0005058!8.05e-07!23;UBERON:0003351!8.05e-07!23;UBERON:0009113!8.05e-07!23;UBERON:0003295!8.05e-07!23;UBERON:0009722!8.05e-07!23;UBERON:0005562!8.05e-07!23;UBERON:0007690!8.05e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0000065,1.61e-12,41;UBERON:0001004,6.18e-12,42;UBERON:0000153,5.01e-09,43;UBERON:0006562,4.26e-08,24;UBERON:0001557,4.26e-08,24;UBERON:0001042,4.26e-08,24;UBERON:0008814,4.26e-08,24;UBERON:0009145,4.26e-08,24;UBERON:0002370,1.03e-07,23;UBERON:0000974,1.03e-07,23;UBERON:0004807,1.03e-07,23;UBERON:0005058,1.03e-07,23;UBERON:0003351,1.03e-07,23;UBERON:0009113,1.03e-07,23;UBERON:0003295,1.03e-07,23;UBERON:0009722,1.03e-07,23;UBERON:0005562,1.03e-07,23;UBERON:0007690,1.03e-07,23;UBERON:0002048,1.24e-07,14;UBERON:0000117,1.24e-07,14;UBERON:0000171,1.24e-07,14;UBERON:0000170,1.24e-07,14;UBERON:0005597,1.24e-07,14;UBERON:0000118,1.24e-07,14;UBERON:0003408,3.93e-07,24|phase1_expression=27.0651551607102,0,0,0,0,0,0,0.387369970324729,0.563154888606667,0.234064526321993,0,0,0.513602189793617,1.39872643870396,0,0,0,0.157731082679119,0.274228867211478,0,1.44573593256819,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,0,0,0.219686182734472,0,0,0,0,0.725362142011344,1.00828139742739,0,0,0,10.7227724255587,13.7537654610729,5.70448263155561,0,0,0,0,0,0,0.384218305321555,0.933206510776299,0.675029691658453,2.3135745748652,0,0.883474163806454,0.244981598429908,0.191690942036473,0,4.40463523997555,4.72443150915195,2.4577045320999,3.03338461779446,3.47653045689157,0.52091337055676,0.837548997004143,0,0.15279824777681,0,0.854230084794618,0.186399445825301,0.227178579999552,0.302286240427142,0,0,0,0,0,0,0,2.04516387093669,1.03914401841148,1.06001872353102,0.281686839553361,3.84979432242953,5.09610479413291,0,0,0,0,0.34255163915718,0.258937883647172,1.03909497345377,0.520455980298408,0.608930956624282,0,0.452167921657868,0.705532242814229,0.628332956648377,0,0,0,1.7794353494215,1.32504911076236,2.42437626567611,0,0,0.628340120440365,0,0,0,0.127070227073065,2.54644086988199,0,0.376963056338593,0.869121600961382,0.255715457330331,4.1557608911912,1.94689515681309,1.32391173005411,2.11491850037158,3.28539585963777,0,4.55421550369463,1.37941262660084,0.720248519221397,0.90422890701429,0.408218994907967,0.640568601424249,0.374806898238915,0.517406741478031,3.44908788692548,4.72765200419548,5.45448484908241,4.16471891612392,9.73165372289593,6.96504333044333,10.0833246839892,3.98068533636986,0,0,0,2.48550927042602,3.51789089971644,1.98068267607116,1.18372367792605,1.57411385397923,0.925602677324269,1.16266972375204,0.804820204198858,0.233530684734339,0,0,0.0810688095458557,0,0,0,0.841159794256509,2.88132914661996,0,0,0.426576501070468,0.232236671860439,0,0,0,0.190225626112559,0,0,0.251335208800269,0,0.38992817423824,0,0,0,2.0863469104839,2.17072173958485,2.25415471346161,2.64746726198909,1.16371492300575,2.24434623649019,2.71917109634306,0.147610147979602,0.627994911365499,0,0,0,0,0,0,0,1.01850340712568,0.575392274901621,0,0,0,0,0,0,0,0,2.03228509183265,6.44270800019648,5.0519142697028,3.39490171550376,5.39787571063555,2.1775813467436,4.04674189506223,2.53673742215138,2.67979744980525,3.32197034473162,4.14582398509466,3.27726629431476,2.59027472798843,1.73578870297814,0,0,0,0,0.80275294993896,0.117211686592203,0.491804836130026,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,3.20518086601059,0.977321756121456,2.63952196756057,0,0.485561272309963,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,2.16073312837572,2.19909762430683,3.21505552547388,1.77340233642274,1.07021290561242,1.64549020602121,0.913394847343798,0.23467170806371,0.42366414172764,0.882113592219848,5.7710188529518,9.20347232166662,10.7960135621399,10.504766272276,12.6388492803697,0,0.556275906031529,0.170870880797853,0.206386867963223,0.555583582109135,0.565105371014073,0.546776910884101,0,0.509935289981566,0.279902904647316,0.414599921413271,0,0.316335993581135,0,0,0.209088296014469,0.218362563746178,0,0,0,0,0,0,3.28936401296753,1.15820943319968,0.388902376688095,0.129159823477731,0.337912250981556,0,0.5208175393758,0.104859344425711,0,0.576060012515731,4.4241556887945,2.43270258348197,15.2012216603944,19.618044269647,11.8157619140538,10.9274745129696,6.37035882455835,8.56599257612548,6.5628192466296,5.18206285253999,5.14213544197887,7.01696741326217,5.8689223400601,2.80504565235765,2.72076460338254,0,0.0897138566094757,0,0.386379188064381,0,0.73260649706906,0,3.00943262421218,0,0.460325236507177,0.572895513439397,1.71853182343688,0,0,0,0.45032120322422,0.453142408984205,1.55328093525546,4.77421798887213,11.1726964552289,4.43907374960749,4.37592090722929,2.51535795153579,1.65459157605013,2.22246727801615,2.67845574410562,2.88827288632634,3.53776096469316,3.8021894983536,2.45214243801899,4.30750934361459,3.52138338226781,2.98664438569189,2.85776214769844,3.24476112645595,2.50781986602817,3.70877310722976,2.79677948255355,3.42869252385415,2.30718548007139,1.90748951957857,1.88950341622027,2.35273451038327,2.5384382367503,1.28049581010941,1.8414879800649,2.71608227691724,2.24456908663095,2.25406534435931,2.9551344712669,2.45538625901814,1.70430525304563,3.2794123866794,5.24602213669686,3.50897412668113,2.79332370262788,1.14772999241306,1.76473135295612,0.463735671240843|short_description=p3@Lef1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:16842
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:P27782,uniprot:D3Z654,uniprot:Q8BGZ9,uniprot:Q3TYB0
|association_with_transcript=347bp_to_ENSMUST00000029611,ENSMUST00000066849,ENSMUST00000106341,NM_010703,uc008rjf.1,uc008rjg.1_5end
|cluster_id=chr3:130813736..130813752,+
|description=CAGE_peak_3_at_Lef1_5end
|id=chr3:130813736..130813752,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000065!4.98e-10!41;UBERON:0001004!2.19e-09!42;UBERON:0000153!2.40e-08!94;UBERON:0006562!3.98e-07!24;UBERON:0001557!3.98e-07!24;UBERON:0001042!3.98e-07!24;UBERON:0008814!3.98e-07!24;UBERON:0009145!3.98e-07!24;UBERON:0002370!8.05e-07!23;UBERON:0000974!8.05e-07!23;UBERON:0004807!8.05e-07!23;UBERON:0005058!8.05e-07!23;UBERON:0003351!8.05e-07!23;UBERON:0009113!8.05e-07!23;UBERON:0003295!8.05e-07!23;UBERON:0009722!8.05e-07!23;UBERON:0005562!8.05e-07!23;UBERON:0007690!8.05e-07!23
|ontology_enrichment_uberon_v019_2=UBERON:0000065,1.61e-12,41;UBERON:0001004,6.18e-12,42;UBERON:0000153,5.01e-09,43;UBERON:0006562,4.26e-08,24;UBERON:0001557,4.26e-08,24;UBERON:0001042,4.26e-08,24;UBERON:0008814,4.26e-08,24;UBERON:0009145,4.26e-08,24;UBERON:0002370,1.03e-07,23;UBERON:0000974,1.03e-07,23;UBERON:0004807,1.03e-07,23;UBERON:0005058,1.03e-07,23;UBERON:0003351,1.03e-07,23;UBERON:0009113,1.03e-07,23;UBERON:0003295,1.03e-07,23;UBERON:0009722,1.03e-07,23;UBERON:0005562,1.03e-07,23;UBERON:0007690,1.03e-07,23;UBERON:0002048,1.24e-07,14;UBERON:0000117,1.24e-07,14;UBERON:0000171,1.24e-07,14;UBERON:0000170,1.24e-07,14;UBERON:0005597,1.24e-07,14;UBERON:0000118,1.24e-07,14;UBERON:0003408,3.93e-07,24
|phase1_expression=27.0651551607102,0,0,0,0,0,0,0.387369970324729,0.563154888606667,0.234064526321993,0,0,0.513602189793617,1.39872643870396,0,0,0,0.157731082679119,0.274228867211478,0,1.44573593256819,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,0,0,0.219686182734472,0,0,0,0,0.725362142011344,1.00828139742739,0,0,0,10.7227724255587,13.7537654610729,5.70448263155561,0,0,0,0,0,0,0.384218305321555,0.933206510776299,0.675029691658453,2.3135745748652,0,0.883474163806454,0.244981598429908,0.191690942036473,0,4.40463523997555,4.72443150915195,2.4577045320999,3.03338461779446,3.47653045689157,0.52091337055676,0.837548997004143,0,0.15279824777681,0,0.854230084794618,0.186399445825301,0.227178579999552,0.302286240427142,0,0,0,0,0,0,0,2.04516387093669,1.03914401841148,1.06001872353102,0.281686839553361,3.84979432242953,5.09610479413291,0,0,0,0,0.34255163915718,0.258937883647172,1.03909497345377,0.520455980298408,0.608930956624282,0,0.452167921657868,0.705532242814229,0.628332956648377,0,0,0,1.7794353494215,1.32504911076236,2.42437626567611,0,0,0.628340120440365,0,0,0,0.127070227073065,2.54644086988199,0,0.376963056338593,0.869121600961382,0.255715457330331,4.1557608911912,1.94689515681309,1.32391173005411,2.11491850037158,3.28539585963777,0,4.55421550369463,1.37941262660084,0.720248519221397,0.90422890701429,0.408218994907967,0.640568601424249,0.374806898238915,0.517406741478031,3.44908788692548,4.72765200419548,5.45448484908241,4.16471891612392,9.73165372289593,6.96504333044333,10.0833246839892,3.98068533636986,0,0,0,2.48550927042602,3.51789089971644,1.98068267607116,1.18372367792605,1.57411385397923,0.925602677324269,1.16266972375204,0.804820204198858,0.233530684734339,0,0,0.0810688095458557,0,0,0,0.841159794256509,2.88132914661996,0,0,0.426576501070468,0.232236671860439,0,0,0,0.190225626112559,0,0,0.251335208800269,0,0.38992817423824,0,0,0,2.0863469104839,2.17072173958485,2.25415471346161,2.64746726198909,1.16371492300575,2.24434623649019,2.71917109634306,0.147610147979602,0.627994911365499,0,0,0,0,0,0,0,1.01850340712568,0.575392274901621,0,0,0,0,0,0,0,0,2.03228509183265,6.44270800019648,5.0519142697028,3.39490171550376,5.39787571063555,2.1775813467436,4.04674189506223,2.53673742215138,2.67979744980525,3.32197034473162,4.14582398509466,3.27726629431476,2.59027472798843,1.73578870297814,0,0,0,0,0.80275294993896,0.117211686592203,0.491804836130026,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,3.20518086601059,0.977321756121456,2.63952196756057,0,0.485561272309963,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,2.16073312837572,2.19909762430683,3.21505552547388,1.77340233642274,1.07021290561242,1.64549020602121,0.913394847343798,0.23467170806371,0.42366414172764,0.882113592219848,5.7710188529518,9.20347232166662,10.7960135621399,10.504766272276,12.6388492803697,0,0.556275906031529,0.170870880797853,0.206386867963223,0.555583582109135,0.565105371014073,0.546776910884101,0,0.509935289981566,0.279902904647316,0.414599921413271,0,0.316335993581135,0,0,0.209088296014469,0.218362563746178,0,0,0,0,0,0,3.28936401296753,1.15820943319968,0.388902376688095,0.129159823477731,0.337912250981556,0,0.5208175393758,0.104859344425711,0,0.576060012515731,4.4241556887945,2.43270258348197,15.2012216603944,19.618044269647,11.8157619140538,10.9274745129696,6.37035882455835,8.56599257612548,6.5628192466296,5.18206285253999,5.14213544197887,7.01696741326217,5.8689223400601,2.80504565235765,2.72076460338254,0,0.0897138566094757,0,0.386379188064381,0,0.73260649706906,0,3.00943262421218,0,0.460325236507177,0.572895513439397,1.71853182343688,0,0,0,0.45032120322422,0.453142408984205,1.55328093525546,4.77421798887213,11.1726964552289,4.43907374960749,4.37592090722929,2.51535795153579,1.65459157605013,2.22246727801615,2.67845574410562,2.88827288632634,3.53776096469316,3.8021894983536,2.45214243801899,4.30750934361459,3.52138338226781,2.98664438569189,2.85776214769844,3.24476112645595,2.50781986602817,3.70877310722976,2.79677948255355,3.42869252385415,2.30718548007139,1.90748951957857,1.88950341622027,2.35273451038327,2.5384382367503,1.28049581010941,1.8414879800649,2.71608227691724,2.24456908663095,2.25406534435931,2.9551344712669,2.45538625901814,1.70430525304563,3.2794123866794,5.24602213669686,3.50897412668113,2.79332370262788,1.14772999241306,1.76473135295612,0.463735671240843
|short_description=p3@Lef1
}}

Revision as of 01:03, 6 August 2015

Short description:p3@Lef1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Lef1_5end
Coexpression cluster:NA
Association with transcript: 347bp_to_ENSMUST00000029611, ENSMUST00000066849, ENSMUST00000106341, NM_010703, uc008rjf.1, uc008rjg.1_5end
EntrezGene:16842
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Lef1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G727.07
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.40
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C310.72
Mouse Granule cells, donor2.CNhs12357.11731-123E313.75
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.72
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.48
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.78
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A42.55
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F24.16
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.11
epididymis, adult.CNhs10490.58-23B23.29
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C64.55
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E23.45
forelimb, embryo E12.CNhs10600.359-14H24.73
forelimb, embryo E13.CNhs10589.384-1E25.45
forelimb, embryo E14.CNhs10577.413-26A84.16
forelimb, embryo E15.CNhs11007.437-20E79.73
forelimb, embryo E17.CNhs10598.1517-43C46.97
forelimb, embryo E18.CNhs11008.1520-43B510.08
gonad, embryo E13.CNhs11044.1564-45I63.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.49
heart, embryo E12.CNhs11015.353-12F53.52
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G12.88
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F82.17
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.65
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G72.24
kidney, neonate N10.CNhs11206.758-6D52.72
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G26.44
lung, embryo E14.CNhs10604.404-26F85.05
lung, embryo E15.CNhs11020.432-17C53.39
lung, embryo E16.CNhs10998.458-17B65.40
lung, embryo E17.CNhs10605.480-44A62.18
lung, embryo E18.CNhs10583.1287-20I64.05
lung, neonate N00.CNhs11224.640-42C62.54
lung, neonate N06.CNhs11212.683-20E52.68
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E64.15
lung, neonate N20.CNhs11109.822-18A43.28
lung, neonate N25.CNhs11119.1359-25C72.59
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H73.21
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G62.64
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A53.22
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C35.77
skin, neonate N00.CNhs11124.650-25G49.20
skin, neonate N03.CNhs11215.662-22H310.80
skin, neonate N06.CNhs11097.693-20I510.50
skin, neonate N10.CNhs11108.762-6C412.64
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F53.29
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B54.42
thymus, embryo E14.CNhs11041.402-44I42.43
thymus, embryo E15.CNhs11005.430-45I215.20
thymus, embryo E16.CNhs11002.456-26C519.62
thymus, embryo E17.CNhs10581.478-18C111.82
thymus, embryo E18.CNhs10595.1273-19G410.93
thymus, neonate N02.CNhs11181.1541-43F86.37
thymus, neonate N03.CNhs11137.2104-43C78.57
thymus, neonate N06.CNhs11197.681-26C46.56
thymus, neonate N07.CNhs11211.713-19D35.18
thymus, neonate N10.CNhs11194.748-24E45.14
thymus, neonate N20.CNhs11186.820-7A27.02
thymus, neonate N25.CNhs11125.1362-25G75.87
thymus, neonate N30.CNhs11132.1393-42G22.81
tongue, adult.CNhs10499.32-1B42.72
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I84.77
whole body, embryo E12.CNhs10587.857-27C911.17
whole body, embryo E13.CNhs10512.372-23H24.44
whole body, embryo E14.5.CNhs10578.420-27D24.38
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.52
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.99
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.80
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.35
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F93.28
whole body, embryo E17.CNhs10517.475-3I55.25
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
respiratory tract1.61e-1241
respiratory system6.18e-1242
anterior region of body5.01e-0943
pharynx4.26e-0824
upper respiratory tract4.26e-0824
chordate pharynx4.26e-0824
pharyngeal arch system4.26e-0824
pharyngeal region of foregut4.26e-0824
thymus1.03e-0723
neck1.03e-0723
respiratory system epithelium1.03e-0723
hemolymphoid system gland1.03e-0723
pharyngeal epithelium1.03e-0723
thymic region1.03e-0723
pharyngeal gland1.03e-0723
entire pharyngeal arch endoderm1.03e-0723
thymus primordium1.03e-0723
early pharyngeal endoderm1.03e-0723
lung1.24e-0714
respiratory tube1.24e-0714
respiration organ1.24e-0714
pair of lungs1.24e-0714
lung primordium1.24e-0714
lung bud1.24e-0714
gland of gut3.93e-0724
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:130813736..130813752,%2B&oldid=3961680"