FFCP PHASE1:Mm9::chrX:132335723..132335735,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=138|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:132335723..132335735,+|id=chrX:132335723..132335735,+|ontology_enrichment_celltype=CL:0000117!2.61e-10!23;CL:0000337!2.61e-10!23;CL:0000540!1.86e-09!33;CL:0000047!1.86e-09!33;CL:0000031!1.86e-09!33;CL:0000404!1.86e-09!33;CL:0000393!5.94e-07!39;CL:0000211!5.94e-07!39|ontology_enrichment_celltype_v019_2=CL:0002610,4.62e-16,3;CL:0002612,1.16e-15,3;CL:0000117,3.84e-13,23;CL:0000337,3.84e-13,23;CL:0000540,3.41e-11,33;CL:0000047,3.41e-11,33;CL:0000031,3.41e-11,33;CL:0000404,3.41e-11,33;CL:0000393,2.77e-09,39;CL:0000211,2.77e-09,39;CL:0002319,2.63e-08,43;CL:0000221,4.33e-08,44;CL:0000133,4.33e-08,44;CL:0002614,1.42e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.36e-19!73;UBERON:0005743!3.36e-19!73;UBERON:0000955!1.24e-18!50;UBERON:0006238!1.24e-18!50;UBERON:0000073!3.00e-18!75;UBERON:0001016!3.00e-18!75;UBERON:0002616!6.19e-18!49;UBERON:0000033!1.14e-17!63;UBERON:0001049!1.63e-17!52;UBERON:0005068!1.63e-17!52;UBERON:0006241!1.63e-17!52;UBERON:0007135!1.63e-17!52;UBERON:0002346!2.00e-17!71;UBERON:0003075!2.00e-17!71;UBERON:0007284!2.00e-17!71;UBERON:0002020!2.17e-17!34;UBERON:0004121!9.35e-17!102;UBERON:0000924!9.35e-17!102;UBERON:0006601!9.35e-17!102;UBERON:0003080!1.60e-16!40;UBERON:0003056!2.74e-16!49;UBERON:0002780!1.05e-15!39;UBERON:0001890!1.05e-15!39;UBERON:0006240!1.05e-15!39;UBERON:0002791!2.20e-14!29;UBERON:0003528!2.20e-14!29;UBERON:0001893!2.20e-14!29;UBERON:0007811!4.31e-13!86;UBERON:0000153!5.29e-13!94;UBERON:0002021!5.38e-09!10;UBERON:0000411!5.38e-09!10;UBERON:0001950!5.38e-09!10;UBERON:0000956!1.70e-08!21;UBERON:0001869!1.70e-08!21;UBERON:0000203!1.70e-08!21;UBERON:0002420!1.11e-07!8;UBERON:0007245!1.11e-07!8;UBERON:0010009!1.11e-07!8;UBERON:0010011!1.11e-07!8;UBERON:0000454!1.11e-07!8;UBERON:0002619!1.24e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.20e-18,54;UBERON:0002021,2.17e-17,10;UBERON:0000411,2.17e-17,10;UBERON:0001950,2.17e-17,10;UBERON:0002020,4.25e-16,34;UBERON:0004684,4.62e-16,3;UBERON:0002275,4.62e-16,3;UBERON:0002257,1.16e-15,3;UBERON:0001017,2.93e-15,73;UBERON:0001016,8.59e-15,75;UBERON:0004121,8.13e-13,95;UBERON:0000924,8.13e-13,95;UBERON:0006601,8.13e-13,95;UBERON:0001049,6.15e-12,52;UBERON:0005068,6.15e-12,52;UBERON:0006241,6.15e-12,52;UBERON:0007135,6.15e-12,52;UBERON:0002346,4.47e-11,64;UBERON:0003075,4.47e-11,64;UBERON:0007284,4.47e-11,64;UBERON:0002619,4.58e-10,17;UBERON:0003528,5.44e-10,29;UBERON:0002791,5.44e-10,29;UBERON:0001893,5.44e-10,29;UBERON:0001948,1.30e-09,5;UBERON:0002315,1.30e-09,5;UBERON:0010371,1.82e-09,73;UBERON:0002780,4.75e-09,39;UBERON:0001890,4.75e-09,39;UBERON:0006240,4.75e-09,39;UBERON:0003080,8.56e-09,40;UBERON:0003056,1.37e-08,49;UBERON:0002240,4.32e-08,6;UBERON:0005174,4.32e-08,6;UBERON:0001137,4.32e-08,6;UBERON:0000956,4.59e-08,21;UBERON:0001869,4.59e-08,21;UBERON:0000203,4.59e-08,21;UBERON:0002038,1.42e-07,3;UBERON:0009663,1.42e-07,3;UBERON:0009661,1.42e-07,3;UBERON:0000125,1.42e-07,3;UBERON:0002308,1.42e-07,3;UBERON:0002616,1.73e-07,46;UBERON:0000955,2.65e-07,47;UBERON:0006238,2.65e-07,47;UBERON:0010314,4.27e-07,92|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,0.0850432901510698,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0.856952953211411,0,0,0.287536413054709,0,1.10115880999389,3.70293280447044,3.5329502648936,0.263772575460388,0.640413505216868,0.52091337055676,1.11673199600552,0.56276261003168,1.83357897332172,1.76777151284201,1.70846016958924,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599162557619291,0.457500602818626,0.125654352112864,0.347648640384553,0,1.0389402227978,0.486723789203273,0,0,0.252722758433675,0,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,1.03481348295606,0,0,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0.465067889500816,0,0,0,0,0.0810688095458557,0,0,0,0.630869845692382,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0,0.126473074248515,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0,0.238968797952552,0,0,0.404810701674894,1.16902343164525,0,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0.540183282093931,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0.188368457004691,0.27338845544205,0,0,0,0,0,0,0,0.216010681643603,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0.469428954583016,0.2604087696879,0.104859344425711,0,0,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0,0.194915761479505,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,2.25900737046827,2.30162618253588,0,1.03111909406213,1.37016503954128,0.755393897389701,0.675022500231806,0.900642406448441,1.35942722695261,1.03552062350364,0,0.399024873401031,0,0,0,0,0,0.412070114477788,0,0,0,0.188626341386076,0,0,0,0.476293691283074,0,0.38581844092741,0,0,0.342869252385415,0.354951612318675,0.238436189947321,0,0.188218760830661,0,0.182927972872773,0,0.135804113845862,0,0,0.29551344712669,0,0,0,0,0,0,0,0,0|short_description=p@chrX:132335723..132335735,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=138 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chrX:132335723..132335735,+ | |||
|description=CAGE_peak_at_chrX:132335723..132335735,+ | |||
|id=chrX:132335723..132335735,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.61e-10!23;CL:0000337!2.61e-10!23;CL:0000540!1.86e-09!33;CL:0000047!1.86e-09!33;CL:0000031!1.86e-09!33;CL:0000404!1.86e-09!33;CL:0000393!5.94e-07!39;CL:0000211!5.94e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,4.62e-16,3;CL:0002612,1.16e-15,3;CL:0000117,3.84e-13,23;CL:0000337,3.84e-13,23;CL:0000540,3.41e-11,33;CL:0000047,3.41e-11,33;CL:0000031,3.41e-11,33;CL:0000404,3.41e-11,33;CL:0000393,2.77e-09,39;CL:0000211,2.77e-09,39;CL:0002319,2.63e-08,43;CL:0000221,4.33e-08,44;CL:0000133,4.33e-08,44;CL:0002614,1.42e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.36e-19!73;UBERON:0005743!3.36e-19!73;UBERON:0000955!1.24e-18!50;UBERON:0006238!1.24e-18!50;UBERON:0000073!3.00e-18!75;UBERON:0001016!3.00e-18!75;UBERON:0002616!6.19e-18!49;UBERON:0000033!1.14e-17!63;UBERON:0001049!1.63e-17!52;UBERON:0005068!1.63e-17!52;UBERON:0006241!1.63e-17!52;UBERON:0007135!1.63e-17!52;UBERON:0002346!2.00e-17!71;UBERON:0003075!2.00e-17!71;UBERON:0007284!2.00e-17!71;UBERON:0002020!2.17e-17!34;UBERON:0004121!9.35e-17!102;UBERON:0000924!9.35e-17!102;UBERON:0006601!9.35e-17!102;UBERON:0003080!1.60e-16!40;UBERON:0003056!2.74e-16!49;UBERON:0002780!1.05e-15!39;UBERON:0001890!1.05e-15!39;UBERON:0006240!1.05e-15!39;UBERON:0002791!2.20e-14!29;UBERON:0003528!2.20e-14!29;UBERON:0001893!2.20e-14!29;UBERON:0007811!4.31e-13!86;UBERON:0000153!5.29e-13!94;UBERON:0002021!5.38e-09!10;UBERON:0000411!5.38e-09!10;UBERON:0001950!5.38e-09!10;UBERON:0000956!1.70e-08!21;UBERON:0001869!1.70e-08!21;UBERON:0000203!1.70e-08!21;UBERON:0002420!1.11e-07!8;UBERON:0007245!1.11e-07!8;UBERON:0010009!1.11e-07!8;UBERON:0010011!1.11e-07!8;UBERON:0000454!1.11e-07!8;UBERON:0002619!1.24e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.20e-18,54;UBERON:0002021,2.17e-17,10;UBERON:0000411,2.17e-17,10;UBERON:0001950,2.17e-17,10;UBERON:0002020,4.25e-16,34;UBERON:0004684,4.62e-16,3;UBERON:0002275,4.62e-16,3;UBERON:0002257,1.16e-15,3;UBERON:0001017,2.93e-15,73;UBERON:0001016,8.59e-15,75;UBERON:0004121,8.13e-13,95;UBERON:0000924,8.13e-13,95;UBERON:0006601,8.13e-13,95;UBERON:0001049,6.15e-12,52;UBERON:0005068,6.15e-12,52;UBERON:0006241,6.15e-12,52;UBERON:0007135,6.15e-12,52;UBERON:0002346,4.47e-11,64;UBERON:0003075,4.47e-11,64;UBERON:0007284,4.47e-11,64;UBERON:0002619,4.58e-10,17;UBERON:0003528,5.44e-10,29;UBERON:0002791,5.44e-10,29;UBERON:0001893,5.44e-10,29;UBERON:0001948,1.30e-09,5;UBERON:0002315,1.30e-09,5;UBERON:0010371,1.82e-09,73;UBERON:0002780,4.75e-09,39;UBERON:0001890,4.75e-09,39;UBERON:0006240,4.75e-09,39;UBERON:0003080,8.56e-09,40;UBERON:0003056,1.37e-08,49;UBERON:0002240,4.32e-08,6;UBERON:0005174,4.32e-08,6;UBERON:0001137,4.32e-08,6;UBERON:0000956,4.59e-08,21;UBERON:0001869,4.59e-08,21;UBERON:0000203,4.59e-08,21;UBERON:0002038,1.42e-07,3;UBERON:0009663,1.42e-07,3;UBERON:0009661,1.42e-07,3;UBERON:0000125,1.42e-07,3;UBERON:0002308,1.42e-07,3;UBERON:0002616,1.73e-07,46;UBERON:0000955,2.65e-07,47;UBERON:0006238,2.65e-07,47;UBERON:0010314,4.27e-07,92 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,0.0850432901510698,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,0.856952953211411,0,0,0.287536413054709,0,1.10115880999389,3.70293280447044,3.5329502648936,0.263772575460388,0.640413505216868,0.52091337055676,1.11673199600552,0.56276261003168,1.83357897332172,1.76777151284201,1.70846016958924,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599162557619291,0.457500602818626,0.125654352112864,0.347648640384553,0,1.0389402227978,0.486723789203273,0,0,0.252722758433675,0,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,1.03481348295606,0,0,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0.465067889500816,0,0,0,0,0.0810688095458557,0,0,0,0.630869845692382,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0,0.126473074248515,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0,0.238968797952552,0,0,0.404810701674894,1.16902343164525,0,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0.540183282093931,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0.188368457004691,0.27338845544205,0,0,0,0,0,0,0,0.216010681643603,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0.469428954583016,0.2604087696879,0.104859344425711,0,0,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0,0,0.194915761479505,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,2.25900737046827,2.30162618253588,0,1.03111909406213,1.37016503954128,0.755393897389701,0.675022500231806,0.900642406448441,1.35942722695261,1.03552062350364,0,0.399024873401031,0,0,0,0,0,0.412070114477788,0,0,0,0.188626341386076,0,0,0,0.476293691283074,0,0.38581844092741,0,0,0.342869252385415,0.354951612318675,0.238436189947321,0,0.188218760830661,0,0.182927972872773,0,0.135804113845862,0,0,0.29551344712669,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chrX:132335723..132335735,+ | |||
}} |
Latest revision as of 00:08, 6 August 2015
Short description: | p@chrX:132335723..132335735, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:132335723..132335735, + |
Coexpression cluster: | MCL_coexpression_mm9:138 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 4.62e-16 | 3 |
neuron of the ventral spinal cord | 1.16e-15 | 3 |
CNS neuron (sensu Vertebrata) | 3.84e-13 | 23 |
neuroblast (sensu Vertebrata) | 3.84e-13 | 23 |
neuron | 3.41e-11 | 33 |
neuronal stem cell | 3.41e-11 | 33 |
neuroblast | 3.41e-11 | 33 |
electrically signaling cell | 3.41e-11 | 33 |
electrically responsive cell | 2.77e-09 | 39 |
electrically active cell | 2.77e-09 | 39 |
neural cell | 2.63e-08 | 43 |
ectodermal cell | 4.33e-08 | 44 |
neurectodermal cell | 4.33e-08 | 44 |
neuron of the substantia nigra | 1.42e-07 | 3 |