FFCP PHASE1:Mm9::chr13:3994607..3994611,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=180 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:3994607..3994611,+ | |||
|description=CAGE_peak_at_chr13:3994607..3994611,+ | |description=CAGE_peak_at_chr13:3994607..3994611,+ | ||
|id=chr13:3994607..3994611,+ | |id=chr13:3994607..3994611,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.44e-16!9;CL:0002251!1.44e-16!9;CL:0000239!2.99e-16!6;CL:0000677!2.99e-16!6;CL:0000212!2.99e-16!6;CL:0000584!2.99e-16!6;CL:0000075!5.71e-14!7;CL:0002076!6.42e-10!15;CL:0000223!2.07e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.64e-22,6;CL:0000677,2.64e-22,6;CL:0000584,2.64e-22,6;CL:0000075,3.02e-19,7;CL:0002563,3.69e-15,9;CL:0002251,3.69e-15,9;CL:0002076,2.11e-09,15;CL:0000223,3.19e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.79e-38!15;UBERON:0001242!4.22e-28!13;UBERON:0000060!4.22e-28!13;UBERON:0001262!4.22e-28!13;UBERON:0004786!4.22e-28!13;UBERON:0004923!1.16e-23!24;UBERON:0003350!1.44e-16!9;UBERON:0004808!1.44e-16!9;UBERON:0001277!1.44e-16!9;UBERON:0001962!1.38e-13!2;UBERON:0001961!1.38e-13!2;UBERON:0001744!1.38e-13!2;UBERON:0000485!1.50e-13!11;UBERON:0005409!6.08e-13!59;UBERON:0000160!4.82e-10!43;UBERON:0002465!2.36e-09!3;UBERON:0000331!1.45e-08!3;UBERON:0002116!1.45e-08!3;UBERON:0001204!1.45e-08!3;UBERON:0001168!1.45e-08!3;UBERON:0003199!1.38e-07!1;UBERON:0001007!1.78e-07!128;UBERON:0001555!1.78e-07!128;UBERON:0007026!1.78e-07!128;UBERON:0004119!2.48e-07!130;UBERON:0000925!2.48e-07!130;UBERON:0006595!2.48e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001962,1.73e-30,2;UBERON:0001961,1.73e-30,2;UBERON:0001744,1.73e-30,2;UBERON:0000344,1.13e-24,15;UBERON:0002465,1.01e-20,3;UBERON:0003199,4.83e-16,1;UBERON:0004923,1.23e-15,24;UBERON:0003350,3.69e-15,9;UBERON:0004808,3.69e-15,9;UBERON:0001277,3.69e-15,9;UBERON:0000485,1.50e-12,11;UBERON:0001242,9.78e-11,13;UBERON:0001262,9.78e-11,13;UBERON:0004786,9.78e-11,13 | |||
|phase1_expression=0,0,0,1.81478526784098,1.00179145989269,0.16787927191189,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7997726838022,2.06468352960453,0,0,0,0.380046838912748,0.252030129759931,0,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0.404593039154462,0,1.04702376793612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,1.81478526784098,1.00179145989269,0.16787927191189,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7997726838022,2.06468352960453,0,0,0,0.380046838912748,0.252030129759931,0,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0.404593039154462,0,1.04702376793612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:3994607..3994611,+ | |short_description=p@chr13:3994607..3994611,+ | ||
}} | }} |
Latest revision as of 23:17, 5 August 2015
Short description: | p@chr13:3994607..3994611, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:3994607..3994611, + |
Coexpression cluster: | MCL_coexpression_mm9:180 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.64e-22 | 6 |
gut absorptive cell | 2.64e-22 | 6 |
enterocyte | 2.64e-22 | 6 |
columnar/cuboidal epithelial cell | 3.02e-19 | 7 |
intestinal epithelial cell | 3.69e-15 | 9 |
epithelial cell of alimentary canal | 3.69e-15 | 9 |
endo-epithelial cell | 2.11e-09 | 15 |
endodermal cell | 3.19e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
gut-associated lymphoid tissue | 1.73e-30 | 2 |
mucosa-associated lymphoid tissue | 1.73e-30 | 2 |
lymphoid tissue | 1.73e-30 | 2 |
mucosa | 1.13e-24 | 15 |
lymphoid system | 1.01e-20 | 3 |
egg chamber | 4.83e-16 | 1 |
organ component layer | 1.23e-15 | 24 |
epithelium of mucosa | 3.69e-15 | 9 |
gastrointestinal system epithelium | 3.69e-15 | 9 |
intestinal epithelium | 3.69e-15 | 9 |
simple columnar epithelium | 1.50e-12 | 11 |
intestinal mucosa | 9.78e-11 | 13 |
wall of intestine | 9.78e-11 | 13 |
gastrointestinal system mucosa | 9.78e-11 | 13 |