FFCP PHASE1:Mm9::chr11:44388716..44388720,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=419 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:44388716..44388720,+ | |||
|description=CAGE_peak_at_chr11:44388716..44388720,+ | |description=CAGE_peak_at_chr11:44388716..44388720,+ | ||
|id=chr11:44388716..44388720,+ | |id=chr11:44388716..44388720,+ | ||
|ontology_enrichment_celltype=CL:0000553!3.56e-11!6;CL:0000556!3.56e-11!6;CL:0000050!2.57e-07!9 | |ontology_enrichment_celltype=CL:0000553!3.56e-11!6;CL:0000556!3.56e-11!6;CL:0000050!2.57e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,8.25e-14,6;CL:0000556,8.25e-14,6;CL:0000945,1.63e-10,1;CL:0000236,1.63e-10,1;CL:0000826,1.63e-10,1;CL:0000050,2.04e-09,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007823!4.19e-13!5;UBERON:0002529!7.33e-11!6;UBERON:0000981!1.19e-10!4;UBERON:0002495!1.19e-10!4;UBERON:0003608!1.19e-10!4;UBERON:0003826!1.19e-10!4;UBERON:0008202!1.19e-10!4;UBERON:0004375!1.19e-10!4;UBERON:0002428!1.19e-10!4;UBERON:0003464!1.19e-10!4;UBERON:0003606!1.19e-10!4;UBERON:0009749!1.19e-10!4;UBERON:0003860!1.19e-10!4;UBERON:0005856!1.19e-10!4;UBERON:0005866!1.19e-10!4;UBERON:0007828!1.19e-10!4;UBERON:0005254!1.19e-10!4;UBERON:0001271!1.19e-10!4;UBERON:0002091!1.19e-10!4;UBERON:0001464!1.19e-10!4;UBERON:0003285!1.19e-10!4;UBERON:0010129!1.19e-10!4;UBERON:0006234!1.19e-10!4;UBERON:0002106!3.61e-10!6;UBERON:0004457!3.61e-10!6;UBERON:0000042!3.61e-10!6;UBERON:0004854!3.61e-10!6;UBERON:0009034!3.61e-10!6;UBERON:0002095!3.61e-10!6;UBERON:0004782!3.61e-10!6;UBERON:0003281!3.61e-10!6;UBERON:0009664!3.61e-10!6;UBERON:0002296!3.61e-10!6;UBERON:0005602!3.61e-10!6;UBERON:0001179!3.61e-10!6;UBERON:0006293!3.61e-10!6;UBERON:0002465!2.46e-09!3;UBERON:0003887!1.51e-08!10;UBERON:0005418!1.60e-08!5;UBERON:0002472!1.60e-08!5;UBERON:0008784!1.60e-08!5;UBERON:0006058!1.60e-08!5;UBERON:0004709!1.60e-08!5;UBERON:0005420!1.60e-08!5;UBERON:0006057!1.60e-08!5;UBERON:0000978!1.60e-08!5;UBERON:0002103!1.60e-08!5;UBERON:0000376!1.60e-08!5;UBERON:0000154!1.60e-08!5;UBERON:0005730!1.60e-08!5;UBERON:0001474!3.20e-08!22;UBERON:0004765!3.20e-08!22;UBERON:0001434!3.20e-08!22;UBERON:0000075!4.24e-07!6;UBERON:0001962!7.10e-07!2;UBERON:0001961!7.10e-07!2;UBERON:0001744!7.10e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,3.80e-27,3;UBERON:0001962,4.66e-19,2;UBERON:0001961,4.66e-19,2;UBERON:0001744,4.66e-19,2;UBERON:0003199,2.01e-10,1;UBERON:0000029,8.42e-10,1;UBERON:0001097,8.42e-10,1;UBERON:0003968,8.42e-10,1;UBERON:0001467,8.42e-10,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0,4.57420139769445,3.97631857456642,3.81950686618227,0.17008658030214,0,0,5.43974237497583,5.96464130774642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54352163625172,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49422144421606,0,0,0,0,0,0,0,0,0,0,2.74041311325744,2.58937883647172,0,0,0,0,0,0,0,0,0,0.884610551949874,0.323533699894818,0.662524555381181,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49288364732112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50925170356284,0.863088412352432,0.810676133875177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0.341741761595705,0,0.555583582109135,0.753473828018764,0.136694227721025,0.686334519619568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463735671240843 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0,4.57420139769445,3.97631857456642,3.81950686618227,0.17008658030214,0,0,5.43974237497583,5.96464130774642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54352163625172,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49422144421606,0,0,0,0,0,0,0,0,0,0,2.74041311325744,2.58937883647172,0,0,0,0,0,0,0,0,0,0.884610551949874,0.323533699894818,0.662524555381181,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49288364732112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50925170356284,0.863088412352432,0.810676133875177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0.341741761595705,0,0.555583582109135,0.753473828018764,0.136694227721025,0.686334519619568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463735671240843 | ||
|short_description=p@chr11:44388716..44388720,+ | |short_description=p@chr11:44388716..44388720,+ | ||
}} | }} |
Latest revision as of 22:23, 5 August 2015
Short description: | p@chr11:44388716..44388720, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:44388716..44388720, + |
Coexpression cluster: | MCL_coexpression_mm9:419 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 8.25e-14 | 6 |
megakaryocyte | 8.25e-14 | 6 |
lymphocyte of B lineage | 1.63e-10 | 1 |
B cell | 1.63e-10 | 1 |
pro-B cell | 1.63e-10 | 1 |
megakaryocyte-erythroid progenitor cell | 2.04e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 3.80e-27 | 3 |
gut-associated lymphoid tissue | 4.66e-19 | 2 |
mucosa-associated lymphoid tissue | 4.66e-19 | 2 |
lymphoid tissue | 4.66e-19 | 2 |
egg chamber | 2.01e-10 | 1 |
lymph node | 8.42e-10 | 1 |
axillary lymph node | 8.42e-10 | 1 |
peripheral lymph node | 8.42e-10 | 1 |
shoulder | 8.42e-10 | 1 |