FFCP PHASE1:Mm9::chr13:30909362..30909373,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=269 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:30909362..30909373,- | |||
|description=CAGE_peak_at_chr13:30909362..30909373,- | |description=CAGE_peak_at_chr13:30909362..30909373,- | ||
|id=chr13:30909362..30909373,- | |id=chr13:30909362..30909373,- | ||
|ontology_enrichment_celltype=CL:0000838!3.09e-57!12;CL:0000542!9.34e-53!13;CL:0000051!9.34e-53!13;CL:0000084!6.88e-52!11;CL:0000827!6.88e-52!11;CL:0000791!6.91e-52!9;CL:0000789!6.91e-52!9;CL:0002420!6.91e-52!9;CL:0002419!6.91e-52!9;CL:0000790!6.91e-52!9;CL:0000624!3.21e-46!8;CL:0000738!4.29e-40!17;CL:0002087!4.29e-40!17;CL:0000893!3.36e-35!6;CL:0002489!3.36e-35!6;CL:0000898!3.36e-35!6;CL:0000809!3.36e-35!6;CL:0000810!3.36e-35!6;CL:0000895!3.36e-35!6;CL:0000808!3.36e-35!6;CL:0000894!3.36e-35!6;CL:0000806!3.36e-35!6;CL:0000807!3.36e-35!6;CL:0000805!3.36e-35!6;CL:0002425!3.36e-35!6;CL:0002436!3.36e-35!6;CL:0002427!3.36e-35!6;CL:0002428!3.36e-35!6;CL:0002429!3.36e-35!6;CL:0002433!3.36e-35!6;CL:0002431!3.36e-35!6;CL:0002432!3.36e-35!6;CL:0002031!6.69e-27!25;CL:0000988!8.42e-25!32;CL:0002032!8.42e-25!32;CL:0000037!8.42e-25!32;CL:0000566!8.42e-25!32;CL:0000837!8.42e-25!32;CL:0002320!7.71e-17!46;CL:0000134!7.71e-17!46;CL:0000219!3.91e-14!54;CL:0000034!3.93e-12!97;CL:0000063!2.69e-11!66;CL:0000144!2.21e-09!121;CL:0000012!2.21e-09!121;CL:0000723!9.06e-08!91;CL:0000048!9.06e-08!91;CL:0000625!3.20e-07!1;CL:0000815!4.83e-07!1;CL:0000792!4.83e-07!1;CL:0000945!7.23e-07!1;CL:0000236!7.23e-07!1;CL:0000826!7.23e-07!1 | |ontology_enrichment_celltype=CL:0000838!3.09e-57!12;CL:0000542!9.34e-53!13;CL:0000051!9.34e-53!13;CL:0000084!6.88e-52!11;CL:0000827!6.88e-52!11;CL:0000791!6.91e-52!9;CL:0000789!6.91e-52!9;CL:0002420!6.91e-52!9;CL:0002419!6.91e-52!9;CL:0000790!6.91e-52!9;CL:0000624!3.21e-46!8;CL:0000738!4.29e-40!17;CL:0002087!4.29e-40!17;CL:0000893!3.36e-35!6;CL:0002489!3.36e-35!6;CL:0000898!3.36e-35!6;CL:0000809!3.36e-35!6;CL:0000810!3.36e-35!6;CL:0000895!3.36e-35!6;CL:0000808!3.36e-35!6;CL:0000894!3.36e-35!6;CL:0000806!3.36e-35!6;CL:0000807!3.36e-35!6;CL:0000805!3.36e-35!6;CL:0002425!3.36e-35!6;CL:0002436!3.36e-35!6;CL:0002427!3.36e-35!6;CL:0002428!3.36e-35!6;CL:0002429!3.36e-35!6;CL:0002433!3.36e-35!6;CL:0002431!3.36e-35!6;CL:0002432!3.36e-35!6;CL:0002031!6.69e-27!25;CL:0000988!8.42e-25!32;CL:0002032!8.42e-25!32;CL:0000037!8.42e-25!32;CL:0000566!8.42e-25!32;CL:0000837!8.42e-25!32;CL:0002320!7.71e-17!46;CL:0000134!7.71e-17!46;CL:0000219!3.91e-14!54;CL:0000034!3.93e-12!97;CL:0000063!2.69e-11!66;CL:0000144!2.21e-09!121;CL:0000012!2.21e-09!121;CL:0000723!9.06e-08!91;CL:0000048!9.06e-08!91;CL:0000625!3.20e-07!1;CL:0000815!4.83e-07!1;CL:0000792!4.83e-07!1;CL:0000945!7.23e-07!1;CL:0000236!7.23e-07!1;CL:0000826!7.23e-07!1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.12e-30,9;CL:0000789,4.12e-30,9;CL:0002420,4.12e-30,9;CL:0002419,4.12e-30,9;CL:0000790,4.12e-30,9;CL:0000893,2.83e-29,6;CL:0002489,2.83e-29,6;CL:0000898,2.83e-29,6;CL:0000809,2.83e-29,6;CL:0000810,2.83e-29,6;CL:0000895,2.83e-29,6;CL:0000808,2.83e-29,6;CL:0000894,2.83e-29,6;CL:0000806,2.83e-29,6;CL:0000807,2.83e-29,6;CL:0000805,2.83e-29,6;CL:0002425,2.83e-29,6;CL:0002436,2.83e-29,6;CL:0002427,2.83e-29,6;CL:0002428,2.83e-29,6;CL:0002429,2.83e-29,6;CL:0002433,2.83e-29,6;CL:0002431,2.83e-29,6;CL:0002432,2.83e-29,6;CL:0000084,1.03e-24,11;CL:0000827,1.03e-24,11;CL:0000838,1.09e-22,12;CL:0000624,4.15e-22,8;CL:0000542,5.66e-21,13;CL:0000051,5.66e-21,13;CL:0000738,4.05e-16,17;CL:0002087,4.05e-16,17;CL:0000625,7.11e-12,1;CL:0002031,4.78e-11,25;CL:0000988,1.13e-08,32;CL:0002032,1.13e-08,32;CL:0000037,1.13e-08,32;CL:0000837,1.13e-08,32;CL:0000034,3.71e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!7.71e-17!46;UBERON:0002370!5.71e-09!23;UBERON:0000974!5.71e-09!23;UBERON:0004807!5.71e-09!23;UBERON:0005058!5.71e-09!23;UBERON:0003351!5.71e-09!23;UBERON:0009113!5.71e-09!23;UBERON:0003295!5.71e-09!23;UBERON:0009722!5.71e-09!23;UBERON:0005562!5.71e-09!23;UBERON:0007690!5.71e-09!23;UBERON:0006562!1.40e-08!24;UBERON:0003408!1.40e-08!24;UBERON:0001557!1.40e-08!24;UBERON:0001042!1.40e-08!24;UBERON:0008814!1.40e-08!24;UBERON:0009145!1.40e-08!24;UBERON:0000072!1.39e-07!27;UBERON:0004177!4.93e-07!29 | |ontology_enrichment_uberon=UBERON:0002384!7.71e-17!46;UBERON:0002370!5.71e-09!23;UBERON:0000974!5.71e-09!23;UBERON:0004807!5.71e-09!23;UBERON:0005058!5.71e-09!23;UBERON:0003351!5.71e-09!23;UBERON:0009113!5.71e-09!23;UBERON:0003295!5.71e-09!23;UBERON:0009722!5.71e-09!23;UBERON:0005562!5.71e-09!23;UBERON:0007690!5.71e-09!23;UBERON:0006562!1.40e-08!24;UBERON:0003408!1.40e-08!24;UBERON:0001557!1.40e-08!24;UBERON:0001042!1.40e-08!24;UBERON:0008814!1.40e-08!24;UBERON:0009145!1.40e-08!24;UBERON:0000072!1.39e-07!27;UBERON:0004177!4.93e-07!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.55e-08,23;UBERON:0000974,5.55e-08,23;UBERON:0004807,5.55e-08,23;UBERON:0005058,5.55e-08,23;UBERON:0003351,5.55e-08,23;UBERON:0009113,5.55e-08,23;UBERON:0003295,5.55e-08,23;UBERON:0009722,5.55e-08,23;UBERON:0005562,5.55e-08,23;UBERON:0007690,5.55e-08,23;UBERON:0006562,1.15e-07,24;UBERON:0003408,1.15e-07,24;UBERON:0001557,1.15e-07,24;UBERON:0001042,1.15e-07,24;UBERON:0008814,1.15e-07,24;UBERON:0009145,1.15e-07,24;UBERON:0000072,7.54e-07,27 | |||
|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,3.23814060948833,2.34064526321993,2.56826952338257,1.43589886191606,0.171200729931206,0.262261207256992,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0.725362142011344,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479260498023681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.58941760983409,4.05859211738608,2.9021994498929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.387369970324729,3.23814060948833,2.34064526321993,2.56826952338257,1.43589886191606,0.171200729931206,0.262261207256992,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0.725362142011344,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479260498023681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.58941760983409,4.05859211738608,2.9021994498929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:30909362..30909373,- | |short_description=p@chr13:30909362..30909373,- | ||
}} | }} |
Latest revision as of 21:30, 5 August 2015
Short description: | p@chr13:30909362..30909373, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:30909362..30909373, - |
Coexpression cluster: | MCL_coexpression_mm9:269 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 5.55e-08 | 23 |
neck | 5.55e-08 | 23 |
respiratory system epithelium | 5.55e-08 | 23 |
hemolymphoid system gland | 5.55e-08 | 23 |
pharyngeal epithelium | 5.55e-08 | 23 |
thymic region | 5.55e-08 | 23 |
pharyngeal gland | 5.55e-08 | 23 |
entire pharyngeal arch endoderm | 5.55e-08 | 23 |
thymus primordium | 5.55e-08 | 23 |
early pharyngeal endoderm | 5.55e-08 | 23 |
pharynx | 1.15e-07 | 24 |
gland of gut | 1.15e-07 | 24 |
upper respiratory tract | 1.15e-07 | 24 |
chordate pharynx | 1.15e-07 | 24 |
pharyngeal arch system | 1.15e-07 | 24 |
pharyngeal region of foregut | 1.15e-07 | 24 |
segment of respiratory tract | 7.54e-07 | 27 |