FFCP PHASE1:Mm9::chr4:99628302..99628307,+: Difference between revisions
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{{FFCP|EntrezGene=72157|HGNC=|MCL_coexpression_id=14|UniProt=A2CEK3|association_with_transcript=-41bp_to_ENSMUST00000102783,uc008tvb.2_5end|description=CAGE_peak_9_at_Pgm2_5end|id=chr4:99628302..99628307,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005418!7.48e-19!5;UBERON:0002472!7.48e-19!5;UBERON:0008784!7.48e-19!5;UBERON:0006058!7.48e-19!5;UBERON:0004709!7.48e-19!5;UBERON:0005420!7.48e-19!5;UBERON:0006057!7.48e-19!5;UBERON:0000978!7.48e-19!5;UBERON:0002103!7.48e-19!5;UBERON:0000376!7.48e-19!5;UBERON:0000154!7.48e-19!5;UBERON:0005730!7.48e-19!5;UBERON:0002529!9.36e-16!6;UBERON:0000981!1.50e-13!4;UBERON:0002495!1.50e-13!4;UBERON:0003608!1.50e-13!4;UBERON:0003826!1.50e-13!4;UBERON:0008202!1.50e-13!4;UBERON:0004375!1.50e-13!4;UBERON:0002428!1.50e-13!4;UBERON:0003464!1.50e-13!4;UBERON:0003606!1.50e-13!4;UBERON:0009749!1.50e-13!4;UBERON:0003860!1.50e-13!4;UBERON:0005856!1.50e-13!4;UBERON:0005866!1.50e-13!4;UBERON:0007828!1.50e-13!4;UBERON:0005254!1.50e-13!4;UBERON:0001271!1.50e-13!4;UBERON:0002091!1.50e-13!4;UBERON:0001464!1.50e-13!4;UBERON:0003285!1.50e-13!4;UBERON:0010129!1.50e-13!4;UBERON:0006234!1.50e-13!4;UBERON:0007823!5.98e-11!5;UBERON:0000075!3.29e-09!6;UBERON:0003102!1.54e-08!23;UBERON:0000026!2.30e-07!13;UBERON:0004708!2.30e-07!13;UBERON:0002101!2.30e-07!13;UBERON:0004357!2.30e-07!13;UBERON:0009872!2.30e-07!13;UBERON:0004347!2.30e-07!13;UBERON:0005732!2.30e-07!13;UBERON:0005733!2.30e-07!13;UBERON:0001374!2.75e-07!1;UBERON:0001630!2.75e-07!1;UBERON:0004252!2.75e-07!1;UBERON:0003663!2.75e-07!1;UBERON:0001383!2.75e-07!1;UBERON:0005090!2.75e-07!1;UBERON:0003661!2.75e-07!1|ontology_enrichment_uberon_v019_2=UBERON:0001374,2.74e-44,1;UBERON:0004252,2.74e-44,1;UBERON:0003663,2.74e-44,1;UBERON:0005090,2.74e-44,1;UBERON:0001630,2.74e-44,1;UBERON:0003661,2.74e-44,1;UBERON:0010890,2.74e-44,1;UBERON:0001383,2.74e-44,1;UBERON:0005418,4.56e-10,5;UBERON:0002472,4.56e-10,5;UBERON:0008784,4.56e-10,5;UBERON:0006058,4.56e-10,5;UBERON:0004709,4.56e-10,5;UBERON:0002529,4.56e-10,5;UBERON:0010538,4.56e-10,5;UBERON:0005420,4.56e-10,5;UBERON:0010758,4.56e-10,5;UBERON:0000978,4.56e-10,5;UBERON:0002103,4.56e-10,5;UBERON:0000376,4.56e-10,5;UBERON:0000154,4.56e-10,5;UBERON:0010709,4.56e-10,5;UBERON:0005730,4.56e-10,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485300549842228,0.662524555381181,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.04941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0.463735671240843|short_description=p9@Pgm2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:72157 | |||
|HGNC= | |||
|MCL_coexpression_id=14 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2CEK3 | |||
|association_with_transcript=-41bp_to_ENSMUST00000102783,uc008tvb.2_5end | |||
|cluster_id=chr4:99628302..99628307,+ | |||
|description=CAGE_peak_9_at_Pgm2_5end | |||
|id=chr4:99628302..99628307,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005418!7.48e-19!5;UBERON:0002472!7.48e-19!5;UBERON:0008784!7.48e-19!5;UBERON:0006058!7.48e-19!5;UBERON:0004709!7.48e-19!5;UBERON:0005420!7.48e-19!5;UBERON:0006057!7.48e-19!5;UBERON:0000978!7.48e-19!5;UBERON:0002103!7.48e-19!5;UBERON:0000376!7.48e-19!5;UBERON:0000154!7.48e-19!5;UBERON:0005730!7.48e-19!5;UBERON:0002529!9.36e-16!6;UBERON:0000981!1.50e-13!4;UBERON:0002495!1.50e-13!4;UBERON:0003608!1.50e-13!4;UBERON:0003826!1.50e-13!4;UBERON:0008202!1.50e-13!4;UBERON:0004375!1.50e-13!4;UBERON:0002428!1.50e-13!4;UBERON:0003464!1.50e-13!4;UBERON:0003606!1.50e-13!4;UBERON:0009749!1.50e-13!4;UBERON:0003860!1.50e-13!4;UBERON:0005856!1.50e-13!4;UBERON:0005866!1.50e-13!4;UBERON:0007828!1.50e-13!4;UBERON:0005254!1.50e-13!4;UBERON:0001271!1.50e-13!4;UBERON:0002091!1.50e-13!4;UBERON:0001464!1.50e-13!4;UBERON:0003285!1.50e-13!4;UBERON:0010129!1.50e-13!4;UBERON:0006234!1.50e-13!4;UBERON:0007823!5.98e-11!5;UBERON:0000075!3.29e-09!6;UBERON:0003102!1.54e-08!23;UBERON:0000026!2.30e-07!13;UBERON:0004708!2.30e-07!13;UBERON:0002101!2.30e-07!13;UBERON:0004357!2.30e-07!13;UBERON:0009872!2.30e-07!13;UBERON:0004347!2.30e-07!13;UBERON:0005732!2.30e-07!13;UBERON:0005733!2.30e-07!13;UBERON:0001374!2.75e-07!1;UBERON:0001630!2.75e-07!1;UBERON:0004252!2.75e-07!1;UBERON:0003663!2.75e-07!1;UBERON:0001383!2.75e-07!1;UBERON:0005090!2.75e-07!1;UBERON:0003661!2.75e-07!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001374,2.74e-44,1;UBERON:0004252,2.74e-44,1;UBERON:0003663,2.74e-44,1;UBERON:0005090,2.74e-44,1;UBERON:0001630,2.74e-44,1;UBERON:0003661,2.74e-44,1;UBERON:0010890,2.74e-44,1;UBERON:0001383,2.74e-44,1;UBERON:0005418,4.56e-10,5;UBERON:0002472,4.56e-10,5;UBERON:0008784,4.56e-10,5;UBERON:0006058,4.56e-10,5;UBERON:0004709,4.56e-10,5;UBERON:0002529,4.56e-10,5;UBERON:0010538,4.56e-10,5;UBERON:0005420,4.56e-10,5;UBERON:0010758,4.56e-10,5;UBERON:0000978,4.56e-10,5;UBERON:0002103,4.56e-10,5;UBERON:0000376,4.56e-10,5;UBERON:0000154,4.56e-10,5;UBERON:0010709,4.56e-10,5;UBERON:0005730,4.56e-10,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485300549842228,0.662524555381181,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.04941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0.463735671240843 | |||
|short_description=p9@Pgm2 | |||
}} |
Revision as of 21:02, 5 August 2015
Short description: | p9@Pgm2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Pgm2_5end |
Coexpression cluster: | MCL_coexpression_mm9:14 |
Association with transcript: | -41bp_to_ENSMUST00000102783, uc008tvb.2_5end |
EntrezGene: | 72157 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
biceps femoris | 2.74e-44 | 1 |
hindlimb stylopod muscle | 2.74e-44 | 1 |
hindlimb muscle | 2.74e-44 | 1 |
muscle structure | 2.74e-44 | 1 |
muscle organ | 2.74e-44 | 1 |
limb muscle | 2.74e-44 | 1 |
pelvic complex muscle | 2.74e-44 | 1 |
muscle of leg | 2.74e-44 | 1 |
hindlimb bud | 4.56e-10 | 5 |
stylopod | 4.56e-10 | 5 |
lower limb segment | 4.56e-10 | 5 |
multi-limb segment region | 4.56e-10 | 5 |
pelvic appendage | 4.56e-10 | 5 |
limb segment | 4.56e-10 | 5 |
paired limb/fin segment | 4.56e-10 | 5 |
pelvic appendage bud | 4.56e-10 | 5 |
subdivision of organism along appendicular axis | 4.56e-10 | 5 |
leg | 4.56e-10 | 5 |
hindlimb | 4.56e-10 | 5 |
hindlimb stylopod | 4.56e-10 | 5 |
posterior region of body | 4.56e-10 | 5 |
pelvic complex | 4.56e-10 | 5 |
hindlimb/pelvic fin field | 4.56e-10 | 5 |