FFCP PHASE1:Mm9::chr13:27734353..27734368,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=19113|HGNC=|MCL_coexpression_id=56|UniProt=Q8BMT3,O54830|association_with_transcript=0bp_to_ENSMUST00000171705,NM_001164058,NM_008930,uc007pxy.2,uc007pxz.2_5end|description=CAGE_peak_1_at_Prl7a1_5end|id=chr13:27734353..27734368,-|ontology_enrichment_celltype=CL:0000349!2.59e-16!3;CL:0000351!2.59e-16!3|ontology_enrichment_celltype_v019_2=CL:0000349,6.64e-38,3;CL:0000351,6.64e-38,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!2.05e-16!3;UBERON:0000478!2.05e-16!3;UBERON:0000158!2.05e-16!3;UBERON:0000358!2.59e-16!3;UBERON:0000307!2.59e-16!3;UBERON:0005795!1.74e-12!4;UBERON:0000995!1.74e-12!4;UBERON:0001987!1.08e-11!2;UBERON:0003124!1.08e-11!2;UBERON:0004340!1.08e-11!2;UBERON:0003975!4.36e-10!5|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.73e-38,3;UBERON:0000478,3.73e-38,3;UBERON:0000158,3.73e-38,3;UBERON:0000358,6.64e-38,3;UBERON:0000307,6.64e-38,3;UBERON:0007010,6.64e-38,3;UBERON:0005795,6.00e-29,4;UBERON:0000995,6.00e-29,4;UBERON:0001987,1.78e-26,2;UBERON:0003124,1.78e-26,2;UBERON:0004340,1.78e-26,2;UBERON:0003975,2.45e-23,5;UBERON:0003134,6.82e-15,8;UBERON:0006834,1.55e-13,1;UBERON:0000305,2.06e-13,1;UBERON:0004175,2.54e-13,9;UBERON:0000474,2.54e-13,9;UBERON:0003100,4.96e-11,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.65182387070309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2976.10660166397,122.862601101016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.5113732809501,34.8089763644766,38.445577147374,0,10.1348536743638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0,0,0,0.237270036248348,0,0,0,0,0,0,0,0,0,0|short_description=p1@Prl7a1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19113 | |||
|HGNC= | |||
|MCL_coexpression_id=56 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BMT3,uniprot:O54830 | |||
|association_with_transcript=0bp_to_ENSMUST00000171705,NM_001164058,NM_008930,uc007pxy.2,uc007pxz.2_5end | |||
|cluster_id=chr13:27734353..27734368,- | |||
|description=CAGE_peak_1_at_Prl7a1_5end | |||
|id=chr13:27734353..27734368,- | |||
|ontology_enrichment_celltype=CL:0000349!2.59e-16!3;CL:0000351!2.59e-16!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.64e-38,3;CL:0000351,6.64e-38,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.05e-16!3;UBERON:0000478!2.05e-16!3;UBERON:0000158!2.05e-16!3;UBERON:0000358!2.59e-16!3;UBERON:0000307!2.59e-16!3;UBERON:0005795!1.74e-12!4;UBERON:0000995!1.74e-12!4;UBERON:0001987!1.08e-11!2;UBERON:0003124!1.08e-11!2;UBERON:0004340!1.08e-11!2;UBERON:0003975!4.36e-10!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.73e-38,3;UBERON:0000478,3.73e-38,3;UBERON:0000158,3.73e-38,3;UBERON:0000358,6.64e-38,3;UBERON:0000307,6.64e-38,3;UBERON:0007010,6.64e-38,3;UBERON:0005795,6.00e-29,4;UBERON:0000995,6.00e-29,4;UBERON:0001987,1.78e-26,2;UBERON:0003124,1.78e-26,2;UBERON:0004340,1.78e-26,2;UBERON:0003975,2.45e-23,5;UBERON:0003134,6.82e-15,8;UBERON:0006834,1.55e-13,1;UBERON:0000305,2.06e-13,1;UBERON:0004175,2.54e-13,9;UBERON:0000474,2.54e-13,9;UBERON:0003100,4.96e-11,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.65182387070309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2976.10660166397,122.862601101016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.5113732809501,34.8089763644766,38.445577147374,0,10.1348536743638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0,0.147198920134397,0,0,0.238436189947321,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0,0,0,0.237270036248348,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Prl7a1 | |||
}} |
Revision as of 20:50, 5 August 2015
Short description: | p1@Prl7a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Prl7a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:56 |
Association with transcript: | 0bp_to_ENSMUST00000171705, NM_001164058, NM_008930, uc007pxy.2, uc007pxz.2_5end |
EntrezGene: | 19113 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.64e-38 | 3 |
trophoblast cell | 6.64e-38 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.73e-38 | 3 |
extraembryonic structure | 3.73e-38 | 3 |
membranous layer | 3.73e-38 | 3 |
blastocyst | 6.64e-38 | 3 |
blastula | 6.64e-38 | 3 |
cleaving embryo | 6.64e-38 | 3 |
embryonic uterus | 6.00e-29 | 4 |
uterus | 6.00e-29 | 4 |
placenta | 1.78e-26 | 2 |
chorion | 1.78e-26 | 2 |
allantois | 1.78e-26 | 2 |
internal female genitalia | 2.45e-23 | 5 |
female reproductive organ | 6.82e-15 | 8 |
uterus or analog | 1.55e-13 | 1 |
amnion | 2.06e-13 | 1 |
internal genitalia | 2.54e-13 | 9 |
female reproductive system | 2.54e-13 | 9 |
female organism | 4.96e-11 | 11 |