FFCP PHASE1:Mm9::chr15:90811421..90811433,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=186 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:90811421..90811433,- | |||
|description=CAGE_peak_at_chr15:90811421..90811433,- | |description=CAGE_peak_at_chr15:90811421..90811433,- | ||
|id=chr15:90811421..90811433,- | |id=chr15:90811421..90811433,- | ||
|ontology_enrichment_celltype=CL:0000540!5.11e-11!33;CL:0000047!5.11e-11!33;CL:0000031!5.11e-11!33;CL:0000404!5.11e-11!33;CL:0000393!1.55e-08!39;CL:0000211!1.55e-08!39;CL:0000117!5.36e-07!23;CL:0000337!5.36e-07!23 | |ontology_enrichment_celltype=CL:0000540!5.11e-11!33;CL:0000047!5.11e-11!33;CL:0000031!5.11e-11!33;CL:0000404!5.11e-11!33;CL:0000393!1.55e-08!39;CL:0000211!1.55e-08!39;CL:0000117!5.36e-07!23;CL:0000337!5.36e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.56e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.11e-17!73;UBERON:0005743!4.11e-17!73;UBERON:0000073!9.64e-17!75;UBERON:0001016!9.64e-17!75;UBERON:0004121!2.55e-16!102;UBERON:0000924!2.55e-16!102;UBERON:0006601!2.55e-16!102;UBERON:0000033!1.21e-15!63;UBERON:0002346!2.02e-14!71;UBERON:0003075!2.02e-14!71;UBERON:0007284!2.02e-14!71;UBERON:0000955!3.79e-14!50;UBERON:0006238!3.79e-14!50;UBERON:0002616!8.13e-14!49;UBERON:0003056!2.81e-13!49;UBERON:0001049!7.82e-13!52;UBERON:0005068!7.82e-13!52;UBERON:0006241!7.82e-13!52;UBERON:0007135!7.82e-13!52;UBERON:0003080!1.10e-11!40;UBERON:0002780!3.55e-11!39;UBERON:0001890!3.55e-11!39;UBERON:0006240!3.55e-11!39;UBERON:0002020!3.13e-10!34;UBERON:0002791!4.30e-10!29;UBERON:0003528!4.30e-10!29;UBERON:0001893!4.30e-10!29;UBERON:0000025!1.74e-09!114;UBERON:0004111!3.06e-09!122;UBERON:0000956!7.74e-09!21;UBERON:0001869!7.74e-09!21;UBERON:0000203!7.74e-09!21;UBERON:0007811!1.26e-07!86;UBERON:0000475!1.57e-07!200;UBERON:0002021!1.81e-07!10;UBERON:0000411!1.81e-07!10;UBERON:0001950!1.81e-07!10;UBERON:0002619!2.56e-07!17;UBERON:0000153!5.95e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.40e-15,10;UBERON:0000411,2.40e-15,10;UBERON:0001950,2.40e-15,10;UBERON:0001017,5.02e-15,73;UBERON:0001016,1.95e-14,75;UBERON:0004121,4.94e-13,95;UBERON:0000924,4.94e-13,95;UBERON:0006601,4.94e-13,95;UBERON:0000073,1.22e-11,54;UBERON:0000956,1.56e-11,21;UBERON:0001869,1.56e-11,21;UBERON:0000203,1.56e-11,21;UBERON:0002619,2.10e-10,17;UBERON:0002616,6.11e-10,46;UBERON:0002346,6.62e-10,64;UBERON:0003075,6.62e-10,64;UBERON:0007284,6.62e-10,64;UBERON:0000955,1.23e-09,47;UBERON:0006238,1.23e-09,47;UBERON:0001049,1.66e-09,52;UBERON:0005068,1.66e-09,52;UBERON:0006241,1.66e-09,52;UBERON:0007135,1.66e-09,52;UBERON:0003080,2.58e-09,40;UBERON:0003528,3.37e-09,29;UBERON:0002791,3.37e-09,29;UBERON:0001893,3.37e-09,29;UBERON:0003056,3.82e-09,49;UBERON:0002780,1.96e-08,39;UBERON:0001890,1.96e-08,39;UBERON:0006240,1.96e-08,39;UBERON:0010371,4.99e-08,73;UBERON:0002020,2.10e-07,34;UBERON:0004684,2.56e-07,3;UBERON:0002275,2.56e-07,3;UBERON:0011216,5.80e-07,194 | |||
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| ||
|short_description=p@chr15:90811421..90811433,- | |short_description=p@chr15:90811421..90811433,- | ||
}} | }} |
Latest revision as of 20:44, 5 August 2015
Short description: | p@chr15:90811421..90811433, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:90811421..90811433, - |
Coexpression cluster: | MCL_coexpression_mm9:186 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.56e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.40e-15 | 10 |
visual cortex | 2.40e-15 | 10 |
neocortex | 2.40e-15 | 10 |
central nervous system | 5.02e-15 | 73 |
nervous system | 1.95e-14 | 75 |
ectoderm-derived structure | 4.94e-13 | 95 |
ectoderm | 4.94e-13 | 95 |
presumptive ectoderm | 4.94e-13 | 95 |
regional part of nervous system | 1.22e-11 | 54 |
cerebral cortex | 1.56e-11 | 21 |
cerebral hemisphere | 1.56e-11 | 21 |
pallium | 1.56e-11 | 21 |
regional part of cerebral cortex | 2.10e-10 | 17 |
regional part of brain | 6.11e-10 | 46 |
neurectoderm | 6.62e-10 | 64 |
neural plate | 6.62e-10 | 64 |
presumptive neural plate | 6.62e-10 | 64 |
brain | 1.23e-09 | 47 |
future brain | 1.23e-09 | 47 |
neural tube | 1.66e-09 | 52 |
neural rod | 1.66e-09 | 52 |
future spinal cord | 1.66e-09 | 52 |
neural keel | 1.66e-09 | 52 |
anterior neural tube | 2.58e-09 | 40 |
brain grey matter | 3.37e-09 | 29 |
regional part of telencephalon | 3.37e-09 | 29 |
telencephalon | 3.37e-09 | 29 |
pre-chordal neural plate | 3.82e-09 | 49 |
regional part of forebrain | 1.96e-08 | 39 |
forebrain | 1.96e-08 | 39 |
future forebrain | 1.96e-08 | 39 |
ecto-epithelium | 4.99e-08 | 73 |
gray matter | 2.10e-07 | 34 |
raphe nuclei | 2.56e-07 | 3 |
reticular formation | 2.56e-07 | 3 |
organ system subdivision | 5.80e-07 | 194 |