FFCP PHASE1:Mm9::chr15:89260490..89260495,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:89260490..89260495,+
|short_description=p@chr15:89260490..89260495,+
|description=CAGE_peak_at_chr15:89260490..89260495,+
|association_with_transcript=NA
...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=386 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:89260490..89260495,+ | |||
|description=CAGE_peak_at_chr15:89260490..89260495,+ | |||
|id=chr15:89260490..89260495,+ | |||
|ontology_enrichment_celltype=CL:0000063!7.46e-08!66;CL:0002563!8.94e-08!9;CL:0002251!8.94e-08!9;CL:0000066!3.11e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.50e-17,9;CL:0002251,1.50e-17,9;CL:0000066,7.82e-17,25;CL:0000223,1.44e-14,20;CL:0000239,1.91e-12,6;CL:0000677,1.91e-12,6;CL:0000584,1.91e-12,6;CL:0002320,6.91e-11,46;CL:0000134,6.91e-11,46;CL:0000075,1.58e-10,7;CL:0000034,6.77e-10,97;CL:0002076,1.05e-09,15;CL:0000988,4.84e-09,32;CL:0002032,4.84e-09,32;CL:0000037,4.84e-09,32;CL:0000837,4.84e-09,32;CL:0000219,1.47e-08,54;CL:0000723,3.09e-08,91;CL:0000048,3.09e-08,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,3.79e-08,6;DOID:0060100,4.85e-07,3;DOID:4045,4.85e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000344!2.63e-08!15;UBERON:0000485!4.99e-08!11;UBERON:0003350!8.94e-08!9;UBERON:0004808!8.94e-08!9;UBERON:0001277!8.94e-08!9;UBERON:0001242!1.72e-07!13;UBERON:0000060!1.72e-07!13;UBERON:0001262!1.72e-07!13;UBERON:0004786!1.72e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.50e-17,9;UBERON:0004808,1.50e-17,9;UBERON:0001277,1.50e-17,9;UBERON:0001242,3.17e-14,13;UBERON:0001262,3.17e-14,13;UBERON:0004786,3.17e-14,13;UBERON:0000485,5.59e-14,11;UBERON:0000344,5.23e-12,15;UBERON:0002384,6.91e-11,46;UBERON:0000490,7.71e-10,66;UBERON:0000160,4.44e-09,31;UBERON:0003929,4.64e-08,55 | |||
|phase1_expression=0.480446541314382,17.0997949743287,10.4649825059593,36.9006337794333,43.0770327753859,3.69334398206158,3.50418960893289,3.74457637980571,0.703943610758334,1.87251621057595,0,0,5.82082481766099,3.14713448708391,0,0,0,0.315462165358238,0.548457734422955,2.54633791078818,0.425216450755349,0.893618560807968,0.783599367416806,0.95995453676044,0.68822784320151,4.59385571292016,2.15380998079537,3.01659725760245,0.950117097281869,0,0.221730510655305,3.17515336729816,2.46025915033828,0,6.93243887403059,2.65975432573588,9.39179038806898,6.27797446105362,7.0320181007142,7.85285615960697,44.7055930903571,10.9287277593351,6.79714494243615,0,0.202753862439029,0.550640256485045,0,0,0.219686182734472,0,0,0,5.70460860596304,4.35217285206807,1.34437519656986,0,0.286533439938757,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0.0958454710182364,0,0,0.127687338085188,0,0,0.182975287204819,0,0,0,0,0,0,0.186399445825301,0.075726193333184,0.151143120213571,10.1452571045587,2.58127163094416,0,5.39703191637817,5.84798775702902,2.24013443548668,0,0.170430322578058,0,0,0.422530259330042,0,0,0,0,0.506719730950197,0,0.68510327831436,0,0,0,0,0.461230994512117,0,0.23517741427141,0.125666591329675,0.247194967734374,2.4581890676385,0.884610551949874,0.161766849947409,0.220841518460394,0,0,0.585561594023094,0.628340120440365,1.02182822083437,1.91704199209472,2.99951365496704,1.90605340609597,0,0,0,0,0,0.20778804455956,0,0,0.248813941220186,0,0,0,0,0,0.452114453507145,0.204109497453984,0.640568601424249,0.562210347358373,0,0.215567992932842,0,0,0,0,0,0,0,4.91549231119264,2.31613116403244,0.568326998791185,0.414251545071004,0,0.180062061461015,0,0,0.308534225774757,0,0,0.116765342367169,0,0,0,0.146199987425332,0.219550115291051,0,0.420579897128254,0.102904612379284,4.95628174475697,3.96675849995316,0,0.232236671860439,0,0.201683524623343,0.444756087689741,0,0,0.658795818896044,0,0,0.19496408711912,0,1.51296634912286,2.19055400579804,0,0.228497025219458,0,0,0.193952487167626,0,0.0632365371242573,0.590440591918409,0,0.246794327843601,0.296452627087149,0.500535317148282,0,0,0.405720242777006,0.482354319504834,0,0,0.162135226775035,0,0,1.86070473834252,0.624075346229121,1.76805214562978,0.538192240565737,0.964887042726734,0.184753190166605,0.189491411770485,0.162964976442026,0,0,0,0,0,0.472905432318573,0,0.159454768657487,0.163863314715738,0,0.289298117163023,0,0,0,0.275936746304732,0,0,0,0.252470927204373,0,0,0.215423397732799,0.238968797952552,0,0,0.809621403349789,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0.214337035031592,0.532020700926821,0.178368817602071,0.658196082408484,0.304464949114599,0,0.21183207086382,0.441056796109924,0.16488625294148,0,0,0,0,0.874442509889552,0.370850604021019,0.170870880797853,0.206386867963223,0,0.188368457004691,0.136694227721025,0.686334519619568,2.71965487990169,5.03825228365169,2.48759952847963,0,0,0,0.108005340821801,0,0.218362563746178,0,0.0826534557253359,0.785267825952089,0.90730481304255,0,0,0,0,0,0,0,0,0,0,0.724752362478018,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0.192423683280659,0.116876902181569,0,0.221985953374065,0,0,0,0.187682475451182,0,0,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0.25347929989024,0.377252682772152,0.187283014939765,0.256100609619477,0.459483751644906,0,0.115884325944855,0.578727661391115,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0,0.581385666529314,0.188218760830661,0.169229215783353,0,0.526139422875686,0.135804113845862,0.561142271657738,0,0.197008964751127,0,0.309873682371932,0.385813221962283,0,0,0,0,0.441182838239031,0.231867835620421 | |phase1_expression=0.480446541314382,17.0997949743287,10.4649825059593,36.9006337794333,43.0770327753859,3.69334398206158,3.50418960893289,3.74457637980571,0.703943610758334,1.87251621057595,0,0,5.82082481766099,3.14713448708391,0,0,0,0.315462165358238,0.548457734422955,2.54633791078818,0.425216450755349,0.893618560807968,0.783599367416806,0.95995453676044,0.68822784320151,4.59385571292016,2.15380998079537,3.01659725760245,0.950117097281869,0,0.221730510655305,3.17515336729816,2.46025915033828,0,6.93243887403059,2.65975432573588,9.39179038806898,6.27797446105362,7.0320181007142,7.85285615960697,44.7055930903571,10.9287277593351,6.79714494243615,0,0.202753862439029,0.550640256485045,0,0,0.219686182734472,0,0,0,5.70460860596304,4.35217285206807,1.34437519656986,0,0.286533439938757,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0.0958454710182364,0,0,0.127687338085188,0,0,0.182975287204819,0,0,0,0,0,0,0.186399445825301,0.075726193333184,0.151143120213571,10.1452571045587,2.58127163094416,0,5.39703191637817,5.84798775702902,2.24013443548668,0,0.170430322578058,0,0,0.422530259330042,0,0,0,0,0.506719730950197,0,0.68510327831436,0,0,0,0,0.461230994512117,0,0.23517741427141,0.125666591329675,0.247194967734374,2.4581890676385,0.884610551949874,0.161766849947409,0.220841518460394,0,0,0.585561594023094,0.628340120440365,1.02182822083437,1.91704199209472,2.99951365496704,1.90605340609597,0,0,0,0,0,0.20778804455956,0,0,0.248813941220186,0,0,0,0,0,0.452114453507145,0.204109497453984,0.640568601424249,0.562210347358373,0,0.215567992932842,0,0,0,0,0,0,0,4.91549231119264,2.31613116403244,0.568326998791185,0.414251545071004,0,0.180062061461015,0,0,0.308534225774757,0,0,0.116765342367169,0,0,0,0.146199987425332,0.219550115291051,0,0.420579897128254,0.102904612379284,4.95628174475697,3.96675849995316,0,0.232236671860439,0,0.201683524623343,0.444756087689741,0,0,0.658795818896044,0,0,0.19496408711912,0,1.51296634912286,2.19055400579804,0,0.228497025219458,0,0,0.193952487167626,0,0.0632365371242573,0.590440591918409,0,0.246794327843601,0.296452627087149,0.500535317148282,0,0,0.405720242777006,0.482354319504834,0,0,0.162135226775035,0,0,1.86070473834252,0.624075346229121,1.76805214562978,0.538192240565737,0.964887042726734,0.184753190166605,0.189491411770485,0.162964976442026,0,0,0,0,0,0.472905432318573,0,0.159454768657487,0.163863314715738,0,0.289298117163023,0,0,0,0.275936746304732,0,0,0,0.252470927204373,0,0,0.215423397732799,0.238968797952552,0,0,0.809621403349789,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0.214337035031592,0.532020700926821,0.178368817602071,0.658196082408484,0.304464949114599,0,0.21183207086382,0.441056796109924,0.16488625294148,0,0,0,0,0.874442509889552,0.370850604021019,0.170870880797853,0.206386867963223,0,0.188368457004691,0.136694227721025,0.686334519619568,2.71965487990169,5.03825228365169,2.48759952847963,0,0,0,0.108005340821801,0,0.218362563746178,0,0.0826534557253359,0.785267825952089,0.90730481304255,0,0,0,0,0,0,0,0,0,0,0.724752362478018,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0.192423683280659,0.116876902181569,0,0.221985953374065,0,0,0,0.187682475451182,0,0,0,0,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0.25347929989024,0.377252682772152,0.187283014939765,0.256100609619477,0.459483751644906,0,0.115884325944855,0.578727661391115,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0,0.581385666529314,0.188218760830661,0.169229215783353,0,0.526139422875686,0.135804113845862,0.561142271657738,0,0.197008964751127,0,0.309873682371932,0.385813221962283,0,0,0,0,0.441182838239031,0.231867835620421 | ||
|short_description=p@chr15:89260490..89260495,+ | |||
}} | }} |
Latest revision as of 20:20, 5 August 2015
Short description: | p@chr15:89260490..89260495, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:89260490..89260495, + |
Coexpression cluster: | MCL_coexpression_mm9:386 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.50e-17 | 9 |
epithelial cell of alimentary canal | 1.50e-17 | 9 |
epithelial cell | 7.82e-17 | 25 |
endodermal cell | 1.44e-14 | 20 |
brush border epithelial cell | 1.91e-12 | 6 |
gut absorptive cell | 1.91e-12 | 6 |
enterocyte | 1.91e-12 | 6 |
connective tissue cell | 6.91e-11 | 46 |
mesenchymal cell | 6.91e-11 | 46 |
columnar/cuboidal epithelial cell | 1.58e-10 | 7 |
stem cell | 6.77e-10 | 97 |
endo-epithelial cell | 1.05e-09 | 15 |
hematopoietic cell | 4.84e-09 | 32 |
hematopoietic oligopotent progenitor cell | 4.84e-09 | 32 |
hematopoietic stem cell | 4.84e-09 | 32 |
hematopoietic multipotent progenitor cell | 4.84e-09 | 32 |
motile cell | 1.47e-08 | 54 |
somatic stem cell | 3.09e-08 | 91 |
multi fate stem cell | 3.09e-08 | 91 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.50e-17 | 9 |
gastrointestinal system epithelium | 1.50e-17 | 9 |
intestinal epithelium | 1.50e-17 | 9 |
intestinal mucosa | 3.17e-14 | 13 |
wall of intestine | 3.17e-14 | 13 |
gastrointestinal system mucosa | 3.17e-14 | 13 |
simple columnar epithelium | 5.59e-14 | 11 |
mucosa | 5.23e-12 | 15 |
connective tissue | 6.91e-11 | 46 |
unilaminar epithelium | 7.71e-10 | 66 |
intestine | 4.44e-09 | 31 |
gut epithelium | 4.64e-08 | 55 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 3.79e-08 | 6 |
musculoskeletal system cancer | 4.85e-07 | 3 |
muscle cancer | 4.85e-07 | 3 |