FFCP PHASE1:Mm9::chr13:23838424..23838436,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:23838424..23838436,-
|short_description=p3@ENSMUST00000118168
|description=CAGE_peak_3_at_ENSMUST00000118168_5end
|association_with_transcript=-56bp_to_EN...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-56bp_to_ENSMUST00000118168_5end | |||
|cluster_id=chr13:23838424..23838436,- | |||
|description=CAGE_peak_3_at_ENSMUST00000118168_5end | |||
|id=chr13:23838424..23838436,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000050,1.52e-13,9;CL:0000049,5.44e-12,19;CL:0000988,6.68e-11,32;CL:0002032,6.68e-11,32;CL:0000037,6.68e-11,32;CL:0000837,6.68e-11,32;CL:0000553,7.49e-11,6;CL:0000556,7.49e-11,6;CL:0000763,2.95e-09,16;CL:0000839,4.87e-09,13;CL:0002027,1.85e-08,3;CL:0002006,1.85e-08,3;CL:0002024,1.85e-08,3;CL:0002031,1.95e-08,25;CL:0002320,5.15e-08,46;CL:0000134,5.15e-08,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,8.23e-11,6;DOID:0060100,1.96e-08,3;DOID:4045,1.96e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002405!5.15e-08!70;UBERON:0002193!1.37e-07!48;UBERON:0002390!1.64e-07!45;UBERON:0003061!1.64e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.14e-09,45;UBERON:0003061,4.14e-09,45;UBERON:0002193,2.45e-08,48;UBERON:0002405,2.45e-08,48;UBERON:0002384,5.15e-08,46;UBERON:0002204,8.78e-08,32;UBERON:0002371,3.76e-07,16 | |||
|phase1_expression=0.320297694209588,0,0,0,1.50268718983904,0.16787927191189,0,0.645616617207881,0,0,0,0,0.342401459862411,0.34968160967599,1.66554880907831,1.61980213911861,1.39912375625629,1.41957974411207,0.959801035240171,1.69755860719212,0.0850432901510698,1.19149141441062,1.04479915655574,0.159992422793407,0.22940928106717,0,0.430761996159075,0,0,0,0.221730510655305,4.44521471421742,1.23012957516914,0,1.1554064790051,0.166234645358492,1.02084678131185,1.25559489221072,2.3440060335714,1.57057123192139,0,0,1.45653105909346,0,0.101376931219515,0.183546752161682,0,0.436050312760893,0,0,0,0,3.6912173332702,0,0.672187598284928,0,0,0,0,0,0,0.338844532069132,0,0,1.97773272513395,0.7104801149461,0,0,0.207379224616955,0.135005938331691,0.630974884054146,0,0,0.122490799214954,0.287536413054709,0,0,0,0,0.395658863190582,0,0,0,0,0,0.294628585473668,0,0.186399445825301,0,0.0755715601067855,0.289864488701678,0,0.679971333707751,0,0,0,0.702222100658759,0,0.259786004602869,0.35333957451034,0.14084341977668,0,0,0,0.216491041011214,0,0,0,0.258937883647172,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0.247194967734374,0,0,0.161766849947409,0.441683036920787,2.42437626567611,0,0,0,0,1.31796636956512,4.19931911695385,0.381210681219194,0,0,0.125654352112864,0,0,0,0.162241263067758,0,0.124406970610093,0,0,0.130120442962704,0.459804208866946,0.180062129805349,0.452114453507145,0.340182495756639,0.12811372028485,0.0937017245597288,0,0.646703978798527,0.189106080167819,0.175951124163949,0.43839146485515,0.556094498451196,0.348252166522167,0,0.59710280045548,1.40442637462647,0.772043721344145,0.284163499395593,0.414251545071004,0.469052119962192,0.180062061461015,0,0.196764231747404,0,0,0,0,0.16455984991348,0.164167464079095,0,0.146199987425332,0,0.268412837520744,0,0,0,0,0.426576501070468,0.464473343720877,0.38660238396628,0,0.22237804384487,0,0,0,0,0.198956472041151,0.58489226135736,0.898819408654221,0.216138049874694,0.199141273254367,1.32767530667157,0.114248512609729,1.1270773567308,0.610953983535943,0.193952487167626,0.280543279561274,0.126473074248515,0,0.156998727841375,0.123397163921801,0.296452627087149,0.500535317148282,0.786235980452812,0.449724224769707,1.01430060694251,1.68824011826692,0.50925170356284,1.15078454980324,0.324270453550071,0.823684239564244,0,0,0,0.252578877947112,0.179397413521912,0,0.184753190166605,0,0.325929952884052,0.339490171550376,0.938760993154008,0.335012514883631,0.238043640886014,0.195133647857799,0,0,0.318909537314974,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0.283076530788832,0,0.584511715822624,0.395287777946524,0.642642632843614,0.425820255624806,0,0,0,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0.900305470156551,0.646793418913773,0.214337035031592,0.354680467284547,0.178368817602071,0.658196082408484,0.304464949114599,0.23467170806371,0,0,0,0.322928853391811,0,0.358117032009409,0,0,0,1.02522528478712,0.206386867963223,0,1.69531611304222,0.956859594047176,2.74533807847827,0.509935289981566,0.839708713941948,1.38199973804424,0,0.316335993581135,0.406638934253697,0.108005340821801,0.418176592028937,0,0.134864346384821,0,0,0.129614973291793,0,0,0.299033092087958,0.330916980914195,0.194451188344048,0.129159823477731,0.168956125490778,0.234714477291508,0,0.209718688851422,0,0,1.26404448251271,0.405450430580328,0.513554785824136,0.25984164595559,1.07416017400489,0.596044064343795,0.600977247599844,1.03382669022204,1.00966449948148,1.06689529317,0.806609481094724,0.779663045918019,0.865906574762965,0.467507608726276,0.226730383615211,0,0.269141569828427,0.167884616364078,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0.103787347584177,1.19707462020309,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0.256100609619477,0.17230640686684,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0,0.436039249896986,0,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0,0.999242311751784,0,0.214871054048298,0,0,0.231867835620421 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|phase1_expression=0.320297694209588,0,0,0,1.50268718983904,0.16787927191189,0,0.645616617207881,0,0,0,0,0.342401459862411,0.34968160967599,1.66554880907831,1.61980213911861,1.39912375625629,1.41957974411207,0.959801035240171,1.69755860719212,0.0850432901510698,1.19149141441062,1.04479915655574,0.159992422793407,0.22940928106717,0,0.430761996159075,0,0,0,0.221730510655305,4.44521471421742,1.23012957516914,0,1.1554064790051,0.166234645358492,1.02084678131185,1.25559489221072,2.3440060335714,1.57057123192139,0,0,1.45653105909346,0,0.101376931219515,0.183546752161682,0,0.436050312760893,0,0,0,0,3.6912173332702,0,0.672187598284928,0,0,0,0,0,0,0.338844532069132,0,0,1.97773272513395,0.7104801149461,0,0,0.207379224616955,0.135005938331691,0.630974884054146,0,0,0.122490799214954,0.287536413054709,0,0,0,0,0.395658863190582,0,0,0,0,0,0.294628585473668,0,0.186399445825301,0,0.0755715601067855,0.289864488701678,0,0.679971333707751,0,0,0,0.702222100658759,0,0.259786004602869,0.35333957451034,0.14084341977668,0,0,0,0.216491041011214,0,0,0,0.258937883647172,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0.247194967734374,0,0,0.161766849947409,0.441683036920787,2.42437626567611,0,0,0,0,1.31796636956512,4.19931911695385,0.381210681219194,0,0,0.125654352112864,0,0,0,0.162241263067758,0,0.124406970610093,0,0,0.130120442962704,0.459804208866946,0.180062129805349,0.452114453507145,0.340182495756639,0.12811372028485,0.0937017245597288,0,0.646703978798527,0.189106080167819,0.175951124163949,0.43839146485515,0.556094498451196,0.348252166522167,0,0.59710280045548,1.40442637462647,0.772043721344145,0.284163499395593,0.414251545071004,0.469052119962192,0.180062061461015,0,0.196764231747404,0,0,0,0,0.16455984991348,0.164167464079095,0,0.146199987425332,0,0.268412837520744,0,0,0,0,0.426576501070468,0.464473343720877,0.38660238396628,0,0.22237804384487,0,0,0,0,0.198956472041151,0.58489226135736,0.898819408654221,0.216138049874694,0.199141273254367,1.32767530667157,0.114248512609729,1.1270773567308,0.610953983535943,0.193952487167626,0.280543279561274,0.126473074248515,0,0.156998727841375,0.123397163921801,0.296452627087149,0.500535317148282,0.786235980452812,0.449724224769707,1.01430060694251,1.68824011826692,0.50925170356284,1.15078454980324,0.324270453550071,0.823684239564244,0,0,0,0.252578877947112,0.179397413521912,0,0.184753190166605,0,0.325929952884052,0.339490171550376,0.938760993154008,0.335012514883631,0.238043640886014,0.195133647857799,0,0,0.318909537314974,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0.215423397732799,0.238968797952552,0.222798674082394,0.283076530788832,0,0.584511715822624,0.395287777946524,0.642642632843614,0.425820255624806,0,0,0,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0.900305470156551,0.646793418913773,0.214337035031592,0.354680467284547,0.178368817602071,0.658196082408484,0.304464949114599,0.23467170806371,0,0,0,0.322928853391811,0,0.358117032009409,0,0,0,1.02522528478712,0.206386867963223,0,1.69531611304222,0.956859594047176,2.74533807847827,0.509935289981566,0.839708713941948,1.38199973804424,0,0.316335993581135,0.406638934253697,0.108005340821801,0.418176592028937,0,0.134864346384821,0,0,0.129614973291793,0,0,0.299033092087958,0.330916980914195,0.194451188344048,0.129159823477731,0.168956125490778,0.234714477291508,0,0.209718688851422,0,0,1.26404448251271,0.405450430580328,0.513554785824136,0.25984164595559,1.07416017400489,0.596044064343795,0.600977247599844,1.03382669022204,1.00966449948148,1.06689529317,0.806609481094724,0.779663045918019,0.865906574762965,0.467507608726276,0.226730383615211,0,0.269141569828427,0.167884616364078,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0.103787347584177,1.19707462020309,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0.256100609619477,0.17230640686684,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0,0.436039249896986,0,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0,0.999242311751784,0,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p3@ENSMUST00000118168 | |||
}} | }} |
Latest revision as of 19:34, 5 August 2015
Short description: | p3@ENSMUST00000118168 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ENSMUST00000118168_5end |
Coexpression cluster: | NA |
Association with transcript: | -56bp_to_ENSMUST00000118168_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte-erythroid progenitor cell | 1.52e-13 | 9 |
common myeloid progenitor | 5.44e-12 | 19 |
hematopoietic cell | 6.68e-11 | 32 |
hematopoietic oligopotent progenitor cell | 6.68e-11 | 32 |
hematopoietic stem cell | 6.68e-11 | 32 |
hematopoietic multipotent progenitor cell | 6.68e-11 | 32 |
megakaryocyte progenitor cell | 7.49e-11 | 6 |
megakaryocyte | 7.49e-11 | 6 |
myeloid cell | 2.95e-09 | 16 |
myeloid lineage restricted progenitor cell | 4.87e-09 | 13 |
CD9-positive, CD41-positive megakaryocyte cell | 1.85e-08 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.85e-08 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.85e-08 | 3 |
hematopoietic lineage restricted progenitor cell | 1.95e-08 | 25 |
connective tissue cell | 5.15e-08 | 46 |
mesenchymal cell | 5.15e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.14e-09 | 45 |
blood island | 4.14e-09 | 45 |
hemolymphoid system | 2.45e-08 | 48 |
immune system | 2.45e-08 | 48 |
connective tissue | 5.15e-08 | 46 |
musculoskeletal system | 8.78e-08 | 32 |
bone marrow | 3.76e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 8.23e-11 | 6 |
musculoskeletal system cancer | 1.96e-08 | 3 |
muscle cancer | 1.96e-08 | 3 |