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FFCP PHASE1:Mm9::chr18:37866849..37866880,+: Difference between revisions

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{{FFCP|EntrezGene=93714|HGNC=|MCL_coexpression_id=1|UniProt=Q91XY2|association_with_transcript=-2bp_to_NM_033589,uc008eqs.1_5end|description=CAGE_peak_1_at_Pcdhga6_5end|id=chr18:37866849..37866880,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000117,2.18e-07,23;CL:0000337,2.18e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.73e-20!71;UBERON:0003075!1.73e-20!71;UBERON:0007284!1.73e-20!71;UBERON:0001017!2.40e-20!73;UBERON:0005743!2.40e-20!73;UBERON:0001049!6.43e-20!52;UBERON:0005068!6.43e-20!52;UBERON:0006241!6.43e-20!52;UBERON:0007135!6.43e-20!52;UBERON:0000073!7.66e-20!75;UBERON:0001016!7.66e-20!75;UBERON:0004121!1.51e-17!102;UBERON:0000924!1.51e-17!102;UBERON:0006601!1.51e-17!102;UBERON:0000955!2.35e-17!50;UBERON:0006238!2.35e-17!50;UBERON:0000033!3.48e-17!63;UBERON:0002616!1.23e-16!49;UBERON:0003056!5.56e-14!49;UBERON:0003080!7.78e-14!40;UBERON:0002780!3.73e-13!39;UBERON:0001890!3.73e-13!39;UBERON:0006240!3.73e-13!39;UBERON:0002020!4.20e-11!34;UBERON:0000025!3.52e-09!114;UBERON:0004111!5.29e-09!122;UBERON:0002791!1.07e-08!29;UBERON:0003528!1.07e-08!29;UBERON:0001893!1.07e-08!29;UBERON:0000153!2.03e-08!94;UBERON:0007811!6.52e-08!86;UBERON:0003076!5.72e-07!12;UBERON:0003057!5.72e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.76e-24,54;UBERON:0001049,7.61e-24,52;UBERON:0005068,7.61e-24,52;UBERON:0006241,7.61e-24,52;UBERON:0007135,7.61e-24,52;UBERON:0001017,6.52e-23,73;UBERON:0001016,5.45e-22,75;UBERON:0002346,1.70e-21,64;UBERON:0003075,1.70e-21,64;UBERON:0007284,1.70e-21,64;UBERON:0000955,4.75e-20,47;UBERON:0006238,4.75e-20,47;UBERON:0002616,8.96e-19,46;UBERON:0004121,4.27e-18,95;UBERON:0000924,4.27e-18,95;UBERON:0006601,4.27e-18,95;UBERON:0010371,1.53e-17,73;UBERON:0003080,6.07e-17,40;UBERON:0003056,2.95e-16,49;UBERON:0002780,1.02e-15,39;UBERON:0001890,1.02e-15,39;UBERON:0006240,1.02e-15,39;UBERON:0002020,3.15e-14,34;UBERON:0010314,1.23e-13,92;UBERON:0003528,1.23e-10,29;UBERON:0002791,1.23e-10,29;UBERON:0001893,1.23e-10,29;UBERON:0002420,2.48e-08,8;UBERON:0007245,2.48e-08,8;UBERON:0010009,2.48e-08,8;UBERON:0010011,2.48e-08,8;UBERON:0000454,2.48e-08,8;UBERON:0000369,1.34e-07,5;UBERON:0002435,1.34e-07,5;UBERON:0000204,1.34e-07,5;UBERON:0010082,1.34e-07,5;UBERON:0003076,1.44e-07,12;UBERON:0003057,1.44e-07,12;UBERON:0000025,1.45e-07,114|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.872100625521786,1.09843091367236,0.58328969722285,0.279972843250725,0,0,0,0,0.514518872071894,0.286533439938757,0,1.41621522601718,1.05798195854407,0.633831403506179,0,0.889294796111139,0,0,0,1.19840044207362,0.384218305321555,0.311068836925433,0.405017814995072,0.210324961351382,2.28520787523043,1.98781686856452,0.857435594504678,0.191690942036473,0,0,1.14918604276669,1.0752457327937,1.18697658957174,1.09785172322892,2.08365348222704,0.558365998002762,1.12552522006336,1.83357897332172,0.589257170947335,1.28134512719193,2.79599168737951,0.227178579999552,0.226714680320357,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0.519572009205738,0,0.422530259330042,0,2.54805239706646,0,0,0,0,0.11418387971906,0,1.03909497345377,0.867426633830679,0.304465478312141,0,0.301445281105245,0.823120949949934,1.38233250462643,0,0.289198713839823,0,0.161766849947409,0.220841518460394,0,0,4.68449275218475,3.56059401582874,0,0,0,0.127070227073065,3.89455662452539,4.11750542536764,2.63874139437015,2.60736480288415,2.81287003063364,3.32460871295296,1.46017136760982,1.01839363850316,0.497627882440372,0.252722758433675,1.05220927943237,0.130120442962704,0,0.360124259610698,0.150704817835715,1.08858398642125,0.640568601424249,0.937017245597288,1.81092359517311,0,0.378212160335639,0.879755620819744,0.43839146485515,0.834141747676794,1.39300866608867,1.02891068203972,1.19420560091096,0,0,0,0,0.703578179943289,0.36012412292203,0.23674473558521,0.393528463494808,0.617068451549513,0.465067889500816,0,0.233530684734339,0.493679549740441,0.492502392237286,0.56748166682099,0.292399974850665,0,0.671032093801859,1.89260953707715,1.23485534855141,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0,0,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0.58489226135736,0,0.432276099749388,0.199141273254367,0.379335801906163,0.571242563048644,0,0,0.775809948670503,0.771494018793504,0.69560190836683,0.147610147979602,0.31399745568275,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0.372140947668503,0,0,0,0.482443521363367,0.554259570499814,0.37898282354097,0.325929952884052,0.848725428875941,0.469380496577004,0.335012514883631,0.714130922658041,0.975668239288994,1.26108115284953,0.8858587585951,0.956728611944923,0.491589944147214,1.03610989119537,0.433947175744535,0,0,0,0,2.0871576698413,0.586058432961016,0,0.504941854408746,0.315508219416257,0.390438744296638,0.646270193198397,0,1.11399337041197,0.283076530788832,0,0.584511715822624,0.3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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:93714
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=uniprot:Q91XY2
|association_with_transcript=-2bp_to_NM_033589,uc008eqs.1_5end
|cluster_id=chr18:37866849..37866880,+
|description=CAGE_peak_1_at_Pcdhga6_5end
|id=chr18:37866849..37866880,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000117,2.18e-07,23;CL:0000337,2.18e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.76e-24,54;UBERON:0001049,7.61e-24,52;UBERON:0005068,7.61e-24,52;UBERON:0006241,7.61e-24,52;UBERON:0007135,7.61e-24,52;UBERON:0001017,6.52e-23,73;UBERON:0001016,5.45e-22,75;UBERON:0002346,1.70e-21,64;UBERON:0003075,1.70e-21,64;UBERON:0007284,1.70e-21,64;UBERON:0000955,4.75e-20,47;UBERON:0006238,4.75e-20,47;UBERON:0002616,8.96e-19,46;UBERON:0004121,4.27e-18,95;UBERON:0000924,4.27e-18,95;UBERON:0006601,4.27e-18,95;UBERON:0010371,1.53e-17,73;UBERON:0003080,6.07e-17,40;UBERON:0003056,2.95e-16,49;UBERON:0002780,1.02e-15,39;UBERON:0001890,1.02e-15,39;UBERON:0006240,1.02e-15,39;UBERON:0002020,3.15e-14,34;UBERON:0010314,1.23e-13,92;UBERON:0003528,1.23e-10,29;UBERON:0002791,1.23e-10,29;UBERON:0001893,1.23e-10,29;UBERON:0002420,2.48e-08,8;UBERON:0007245,2.48e-08,8;UBERON:0010009,2.48e-08,8;UBERON:0010011,2.48e-08,8;UBERON:0000454,2.48e-08,8;UBERON:0000369,1.34e-07,5;UBERON:0002435,1.34e-07,5;UBERON:0000204,1.34e-07,5;UBERON:0010082,1.34e-07,5;UBERON:0003076,1.44e-07,12;UBERON:0003057,1.44e-07,12;UBERON:0000025,1.45e-07,114
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.872100625521786,1.09843091367236,0.58328969722285,0.279972843250725,0,0,0,0,0.514518872071894,0.286533439938757,0,1.41621522601718,1.05798195854407,0.633831403506179,0,0.889294796111139,0,0,0,1.19840044207362,0.384218305321555,0.311068836925433,0.405017814995072,0.210324961351382,2.28520787523043,1.98781686856452,0.857435594504678,0.191690942036473,0,0,1.14918604276669,1.0752457327937,1.18697658957174,1.09785172322892,2.08365348222704,0.558365998002762,1.12552522006336,1.83357897332172,0.589257170947335,1.28134512719193,2.79599168737951,0.227178579999552,0.226714680320357,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0.519572009205738,0,0.422530259330042,0,2.54805239706646,0,0,0,0,0.11418387971906,0,1.03909497345377,0.867426633830679,0.304465478312141,0,0.301445281105245,0.823120949949934,1.38233250462643,0,0.289198713839823,0,0.161766849947409,0.220841518460394,0,0,4.68449275218475,3.56059401582874,0,0,0,0.127070227073065,3.89455662452539,4.11750542536764,2.63874139437015,2.60736480288415,2.81287003063364,3.32460871295296,1.46017136760982,1.01839363850316,0.497627882440372,0.252722758433675,1.05220927943237,0.130120442962704,0,0.360124259610698,0.150704817835715,1.08858398642125,0.640568601424249,0.937017245597288,1.81092359517311,0,0.378212160335639,0.879755620819744,0.43839146485515,0.834141747676794,1.39300866608867,1.02891068203972,1.19420560091096,0,0,0,0,0.703578179943289,0.36012412292203,0.23674473558521,0.393528463494808,0.617068451549513,0.465067889500816,0,0.233530684734339,0.493679549740441,0.492502392237286,0.56748166682099,0.292399974850665,0,0.671032093801859,1.89260953707715,1.23485534855141,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0,0,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0.58489226135736,0,0.432276099749388,0.199141273254367,0.379335801906163,0.571242563048644,0,0,0.775809948670503,0.771494018793504,0.69560190836683,0.147610147979602,0.31399745568275,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0.372140947668503,0,0,0,0.482443521363367,0.554259570499814,0.37898282354097,0.325929952884052,0.848725428875941,0.469380496577004,0.335012514883631,0.714130922658041,0.975668239288994,1.26108115284953,0.8858587585951,0.956728611944923,0.491589944147214,1.03610989119537,0.433947175744535,0,0,0,0,2.0871576698413,0.586058432961016,0,0.504941854408746,0.315508219416257,0.390438744296638,0.646270193198397,0,1.11399337041197,0.283076530788832,0,0.584511715822624,0.395287777946524,4.17717711348349,0.425820255624806,1.06839362200353,1.30309567482861,0.164970122972535,0,0.485561272309963,0.906970670894253,0.188605079755898,0.295301892880773,0.614870295887855,1.03371317267288,0.363533729477506,0,0.316036757935816,0,0,1.36175842301515,0.720244376125241,0.776152102696527,1.28602221018955,0.886701168211368,1.42695054081656,1.31639216481697,1.2178597964584,0.704015124191131,0,0.220528398054962,0,0,0.361877549568935,0.238744688006273,0.492422699235184,0,1.66882771809459,0.170870880797853,1.23832120777933,0.925972636848558,0,0.27338845544205,0,0,0,0.138199973804424,0,0.158167996790568,0,0.216010681643603,0.209088296014469,0.218362563746178,0.539457385539283,0.495920734352016,0.26175594198403,0.129614973291793,0,0,1.04661582230785,1.98550188548517,0.777804753376191,2.0665571756437,1.68956125490778,2.34714477291508,0.13020438484395,0.419437377702843,0.241584120826006,0,0,0.405450430580328,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0,0.100826185136841,0,0,0,0.453460767230423,0,0,0,0.772758376128762,0.563047426353546,0.36630324853453,0.214368379079066,0,2.25900737046827,1.84130094602871,2.29158205375759,2.40594455281163,1.37016503954128,0,0.675022500231806,0.900642406448441,0.906284817968409,1.03552062350364,0.207574695168353,0.399024873401031,0.512200817262403,1.21553358534147,0.419226325255965,0,0.44449345560323,0.412070114477788,0.64183841918363,0.758091635291392,0.25347929989024,0.377252682772152,0.468207537349412,1.02440243847791,0.574354689556133,0.952587382566147,0.463537303779422,0.578727661391115,0.412085900803307,0.147198920134397,0,0.177475806159338,0,0.290692833264657,0.564656282491984,0.676916863133412,0,0.263069711437843,0.950628796921032,1.12228454331548,0.474540072496697,0.197008964751127,0.409231043169689,0.309873682371932,0.385813221962283,0.499621155875892,0.701794825336225,0.859484216193193,0.382576664137687,0.441182838239031,1.15933917810211
|short_description=p1@Pcdhga6
}}

Revision as of 18:05, 5 August 2015

Short description:p1@Pcdhga6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pcdhga6_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -2bp_to_NM_033589, uc008eqs.1_5end
EntrezGene:93714
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p1@Pcdhga6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.80
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I31.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I23.56
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A43.89
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F12.64
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C61.09
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G11.23
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.70
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C51.99
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I52.07
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B72.35
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.18e-0723
neuroblast (sensu Vertebrata)2.18e-0723

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.76e-2454
neural tube7.61e-2452
neural rod7.61e-2452
future spinal cord7.61e-2452
neural keel7.61e-2452
central nervous system6.52e-2373
nervous system5.45e-2275
neurectoderm1.70e-2164
neural plate1.70e-2164
presumptive neural plate1.70e-2164
brain4.75e-2047
future brain4.75e-2047
regional part of brain8.96e-1946
ectoderm-derived structure4.27e-1895
ectoderm4.27e-1895
presumptive ectoderm4.27e-1895
ecto-epithelium1.53e-1773
anterior neural tube6.07e-1740
pre-chordal neural plate2.95e-1649
regional part of forebrain1.02e-1539
forebrain1.02e-1539
future forebrain1.02e-1539
gray matter3.15e-1434
structure with developmental contribution from neural crest1.23e-1392
brain grey matter1.23e-1029
regional part of telencephalon1.23e-1029
telencephalon1.23e-1029
basal ganglion2.48e-088
nuclear complex of neuraxis2.48e-088
aggregate regional part of brain2.48e-088
collection of basal ganglia2.48e-088
cerebral subcortex2.48e-088
corpus striatum1.34e-075
striatum1.34e-075
ventral part of telencephalon1.34e-075
future corpus striatum1.34e-075
posterior neural tube1.44e-0712
chordal neural plate1.44e-0712
tube1.45e-07114
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