FFCP PHASE1:Mm9::chr4:76096494..76096519,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:76096494..76096519,- | |||
|description=CAGE_peak_at_chr4:76096494..76096519,- | |description=CAGE_peak_at_chr4:76096494..76096519,- | ||
|id=chr4:76096494..76096519,- | |id=chr4:76096494..76096519,- | ||
|ontology_enrichment_celltype=CL:0000117!1.87e-10!23;CL:0000337!1.87e-10!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.15e-11,23;CL:0000337,4.15e-11,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.09e-12!71;UBERON:0003075!1.09e-12!71;UBERON:0007284!1.09e-12!71;UBERON:0003056!1.68e-12!49;UBERON:0001049!8.84e-10!52;UBERON:0005068!8.84e-10!52;UBERON:0006241!8.84e-10!52;UBERON:0007135!8.84e-10!52;UBERON:0002020!3.02e-09!34;UBERON:0000033!4.67e-09!63;UBERON:0004121!1.83e-08!102;UBERON:0000924!1.83e-08!102;UBERON:0006601!1.83e-08!102;UBERON:0002780!2.07e-08!39;UBERON:0001890!2.07e-08!39;UBERON:0006240!2.07e-08!39;UBERON:0003080!2.15e-08!40;UBERON:0000468!8.23e-08!333;UBERON:0001017!4.92e-07!73;UBERON:0005743!4.92e-07!73;UBERON:0002616!6.90e-07!49;UBERON:0000922!9.31e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.84e-11,64;UBERON:0003075,2.84e-11,64;UBERON:0007284,2.84e-11,64;UBERON:0003056,1.16e-10,49;UBERON:0002020,3.08e-09,34;UBERON:0010371,9.10e-09,73;UBERON:0001049,4.08e-08,52;UBERON:0005068,4.08e-08,52;UBERON:0006241,4.08e-08,52;UBERON:0007135,4.08e-08,52;UBERON:0002102,5.40e-08,7;UBERON:0004710,5.40e-08,7;UBERON:0005419,5.40e-08,7;UBERON:0005417,5.40e-08,7;UBERON:0005729,5.40e-08,7;UBERON:0001948,1.14e-07,5;UBERON:0002315,1.14e-07,5;UBERON:0000073,1.45e-07,54;UBERON:0004121,2.91e-07,95;UBERON:0000924,2.91e-07,95;UBERON:0006601,2.91e-07,95;UBERON:0002780,7.16e-07,39;UBERON:0001890,7.16e-07,39;UBERON:0006240,7.16e-07,39;UBERON:0010708,8.14e-07,8 | |||
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|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0.139986421625363,1.43752564364972,0,0,0,0,0.286533439938757,0,2.22548106945558,2.11596391708813,1.90149421051854,0,0,0,0,0,0,0,1.03689612308478,0.945041568321835,2.52389953621658,2.57085885963423,1.76694832761291,1.22490799214954,0.862609239164127,3.67687514644008,0,0.638436690425939,0.46081959976873,2.50583946687368,2.10421580285542,1.56274011167028,0.837548997004143,1.68828783009504,0.61119299110724,4.71405736757868,4.55589378557129,6.89677949553612,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.593768556259299,0.693941307064543,0.608930956624282,0.461230994512117,0.150722640552623,0.352766121407114,0.251333182659351,0,0.433798070759735,0.884610551949874,0.647067399789637,0.441683036920787,0,0,0,0.41889341362691,0,0,0,0,0.299581278809645,0,1.00523481690292,0.347648640384553,0.255715457330331,1.0389402227978,1.29793010454206,0.81471491080253,0.746441823660558,0,0.841767423545896,0.910843100738926,1.14951052216736,1.62055916824814,2.10986744970001,2.04109497453984,2.17793324484245,2.62364828767241,2.84573707812917,1.5089759505299,1.51284864134255,3.16712023495108,2.19195732427575,2.22437799380478,1.39300866608867,1.64625709126355,1.59227413454795,0,0,0,0,0.469052119962192,0.36012412292203,0.946978942340841,0.787056926989615,0.308534225774757,0,0.536546802799238,0.467061369468678,0.493679549740441,0,0.0810688095458557,0,0,0,0,1.02904612379284,0,0,2.13288250535234,0.464473343720877,0.77320476793256,0.201683524623343,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0.199141273254367,1.51734320762465,1.5994791765362,3.38123207019241,0.814605311381257,0.193952487167626,0.911765658574141,0.316182685621286,0.295220295959204,0.156998727841375,0.123397163921801,0,0.333690211432188,0.196558995113203,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0.814824882210129,0.509235257325564,0,0.670025029767263,1.19021820443007,0,1.89162172927429,2.87904096543407,2.07291199254733,0.655453258862952,0.172684981865896,0.433947175744535,0,0,0,0,0.642202359951168,0.234423373184406,0,0,0,0,0,0,0.222798674082394,0,0,0,0.395287777946524,0,3.83238230062325,0.35613120733451,0.977321756121456,0.494910368917606,0,0.242780636154981,1.51161778482376,0.188605079755898,0,0,0,0,0,0,0,0,0,1.26042765821917,1.29358683782755,1.28602221018955,0.886701168211368,0.713475270408282,1.31639216481697,0.608929898229199,0,0,0,0.16488625294148,0,0.301564624640779,0.119372344003136,0.328281799490123,0,0.370850604021019,0,0.412773735926445,0,0,0,0,0,0,0,0,2.05618395827738,1.82987520414164,0.756037385752609,0.209088296014469,0.218362563746178,0.269728692769641,0.165306911450672,0.523511883968059,0,0,0,0.598066184175915,0.330916980914195,0.583353565032143,0.516639293910924,0.844780627453891,0.58678619322877,1.17183946359555,0.104859344425711,0,0,0,1.01362607645082,0.205421914329655,0,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0.183151624267265,0,0,1.12950368523413,1.38097570952153,1.71868654031819,1.89038500578056,0,0.755393897389701,2.02506750069542,0,0.906284817968409,0.51776031175182,0.830298780673413,1.59609949360412,3.07320490357441,1.45864030240976,0.838452650511929,0.183843508450014,0.44449345560323,0.824140228955577,1.60459604795908,0.758091635291392,2.02783439912192,1.13175804831646,1.68554713445788,1.02440243847791,1.14870937911227,0.952587382566147,0.927074607558844,1.54327376370964,0.412085900803307,0.294397840268795,2.40008476669791,1.4198064492747,2.14592570952589,0.436039249896986,1.59985946706062,1.18460451048347,0.73171189149109,2.36762740294059,1.22223702461276,2.80571135828869,1.30498519936592,0.985044823755635,0.818462086339379,1.39443157067369,1.92906610981141,0.749431733813838,1.87145286756327,0.859484216193193,0.191288332068843,0,0.231867835620421 | ||
|short_description=p@chr4:76096494..76096519,- | |short_description=p@chr4:76096494..76096519,- | ||
}} | }} |
Latest revision as of 17:39, 5 August 2015
Short description: | p@chr4:76096494..76096519, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:76096494..76096519, - |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.15e-11 | 23 |
neuroblast (sensu Vertebrata) | 4.15e-11 | 23 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 2.84e-11 | 64 |
neural plate | 2.84e-11 | 64 |
presumptive neural plate | 2.84e-11 | 64 |
pre-chordal neural plate | 1.16e-10 | 49 |
gray matter | 3.08e-09 | 34 |
ecto-epithelium | 9.10e-09 | 73 |
neural tube | 4.08e-08 | 52 |
neural rod | 4.08e-08 | 52 |
future spinal cord | 4.08e-08 | 52 |
neural keel | 4.08e-08 | 52 |
forelimb | 5.40e-08 | 7 |
pectoral appendage | 5.40e-08 | 7 |
pectoral appendage bud | 5.40e-08 | 7 |
forelimb bud | 5.40e-08 | 7 |
forelimb/pectoral fin field | 5.40e-08 | 7 |
regional part of spinal cord | 1.14e-07 | 5 |
gray matter of spinal cord | 1.14e-07 | 5 |
regional part of nervous system | 1.45e-07 | 54 |
ectoderm-derived structure | 2.91e-07 | 95 |
ectoderm | 2.91e-07 | 95 |
presumptive ectoderm | 2.91e-07 | 95 |
regional part of forebrain | 7.16e-07 | 39 |
forebrain | 7.16e-07 | 39 |
future forebrain | 7.16e-07 | 39 |
pectoral complex | 8.14e-07 | 8 |