FFCP PHASE1:Mm9::chr18:36447599..36447612,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr18:36447599..36447612,+ to FFCP PHASE1:Mm9::chr18:36447599..36447612,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=186 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:36447599..36447612,+ | |||
|description=CAGE_peak_at_chr18:36447599..36447612,+ | |||
|id=chr18:36447599..36447612,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!4.93e-11!114;UBERON:0004111!1.57e-10!122;UBERON:0000480!2.02e-09!308;UBERON:0000467!2.02e-09!308;UBERON:0000955!4.51e-09!50;UBERON:0006238!4.51e-09!50;UBERON:0002616!1.34e-08!49;UBERON:0001049!2.04e-08!52;UBERON:0005068!2.04e-08!52;UBERON:0006241!2.04e-08!52;UBERON:0007135!2.04e-08!52;UBERON:0002021!5.30e-08!10;UBERON:0000411!5.30e-08!10;UBERON:0001950!5.30e-08!10;UBERON:0000923!7.86e-08!314;UBERON:0005291!7.86e-08!314;UBERON:0006598!7.86e-08!314;UBERON:0002532!7.86e-08!314;UBERON:0002050!8.79e-08!317;UBERON:0005423!8.79e-08!317;UBERON:0000062!9.61e-08!269;UBERON:0000477!1.19e-07!154;UBERON:0002346!1.22e-07!71;UBERON:0003075!1.22e-07!71;UBERON:0007284!1.22e-07!71;UBERON:0000033!3.44e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.07e-10,54;UBERON:0000025,2.86e-10,114;UBERON:0004111,1.05e-09,122;UBERON:0001049,1.85e-09,52;UBERON:0005068,1.85e-09,52;UBERON:0006241,1.85e-09,52;UBERON:0007135,1.85e-09,52;UBERON:0002021,3.92e-09,10;UBERON:0000411,3.92e-09,10;UBERON:0001950,3.92e-09,10;UBERON:0000955,1.19e-08,47;UBERON:0006238,1.19e-08,47;UBERON:0002616,3.93e-08,46;UBERON:0010314,1.08e-07,92;UBERON:0002346,1.36e-07,64;UBERON:0003075,1.36e-07,64;UBERON:0007284,1.36e-07,64;UBERON:0001017,2.36e-07,73;UBERON:0003080,3.91e-07,40;UBERON:0002020,6.47e-07,34;UBERON:0002780,9.41e-07,39;UBERON:0001890,9.41e-07,39;UBERON:0006240,9.41e-07,39;UBERON:0001016,9.64e-07,75 | |||
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|phase1_expression=0,0,0,0.90739263392049,0,0,0.233612640595526,0.516493293766305,0.422366166455,0.234064526321993,0.68487187290202,0.638177271962691,1.19840510951844,0.786783621770977,0.333109761815663,0.809901069559304,0,0.473193248037357,0.959801035240171,0,1.61582251287033,0.198581902401771,0.261199789138935,1.11994695955385,0.45881856213434,0,0,0,0,0.504060259519861,0.221730510655305,0,0,0,0.288851619751275,0,0,0.837063261473815,0.7813353445238,0,0,0,0.485510353031154,0.755380907853464,1.31790010585369,1.46837401729345,0,0.872100625521786,0.219686182734472,0.194429899074283,0,0,0.335565212115473,0.725362142011344,2.35265659399725,1.28629718017973,1.14613375975503,1.54701627683233,0.404632921719196,0,0.633831403506179,0,0,0.899899717281399,1.97773272513395,0,0,1.53687322128622,0.829516898467821,0.540023753326763,0.420649922702764,1.42825492201902,2.20868540951614,0.122490799214954,0.575072826109418,1.83843757322004,6.60695285996332,11.3641730895817,11.981309593987,0,0.823388792421687,1.04182674111352,3.62937898701795,4.50210088025344,7.94550888439413,5.59794312399969,1.70846016958924,0.745597783301202,0.908714319998209,0.68014404096107,0.869593466105033,0,0.679971333707751,3.77792234146472,1.94932925234301,2.24013443548668,0.561777680527007,2.72688516124892,2.07828803682295,2.47337702157238,0.281686839553361,0,0,0,1.29894624606728,1.01343946190039,1.51657333504435,1.25602267690966,1.29468941823586,1.92974780784272,0.867426633830679,0.913396434936424,0.922461989024234,2.26083960828934,1.64624189989987,1.63366568728578,1.97755974187499,0.86759614151947,0.884610551949874,0.647067399789637,2.20841518460394,1.93950101254089,1.86391761218122,6.14839673724249,3.97948742945565,0.510914110417183,0.359445373517761,0,0.381210681219194,2.69623150928681,5.94750783664214,2.26177833803156,2.25971616249959,3.83573185995496,4.36354893575076,3.73154905055843,1.52759045775474,0.995255764880744,1.26361379216837,2.73574412652416,0.520481771850815,0,0.180062129805349,0.452114453507145,1.49680298132921,2.0498195245576,0.843315521037559,5.17406741478031,0.215567992932842,0,0.175951124163949,0.43839146485515,1.39023624612799,0.696504333044333,0.823128545631774,0.199034266818493,0,0,0.284163499395593,0.828503090142008,0.938104239924385,1.44049649168812,0.946978942340841,1.96764231747404,2.31400669331067,2.55787339225449,1.07309360559848,1.86824547787471,1.15191894939436,5.41752631461014,1.29710095273369,0.877199924551994,1.97595103761946,0.805238512562231,2.3131894342054,2.98423375899925,0.991256348951394,0.264450566663544,1.06644125267617,1.16118335930219,0.77320476793256,0.605050573870028,1.11189021922435,1.52180500890047,2.37264530772256,2.30578536613615,3.2673577144035,1.1937388322469,2.53453313254856,2.69645822596266,3.24207074812041,0.796565093017469,0.379335801906163,0.456994050438915,1.1270773567308,1.01825663922657,0.581857461502877,1.68325967736765,2.15004226222475,4.28069429140846,3.45397201251025,1.85095745882701,1.48226313543574,0.333690211432188,0.589676985339609,0.674586337154561,0.405720242777006,0.241177159752417,0,1.15078454980324,1.13494658742525,1.09824565275233,33.0666875012915,2.60498663367952,1.24815069245824,2.52578877947112,0.538192240565737,1.4473305640901,0.923765950833023,0.37898282354097,0.325929952884052,0.848725428875941,1.40814148973101,0.167506257441816,0.476087281772027,2.14647012643579,1.57635144106191,4.65075848262427,4.14582398509466,3.60499292374624,3.7990696010497,2.89298117163023,1.50791283939272,1.08781136763742,1.47529281905711,0.827810238914197,3.05046120976805,3.6335622843583,0.983609672260053,0.757412781613119,0.631016438832513,0.390438744296638,0.861693590931196,1.19484398976276,0.445597348164788,0.283076530788832,0.809621403349789,2.63030272120181,1.58115111178609,4.81981974632711,0.851640511249612,0.35613120733451,0.81443479676788,1.64970122972535,0,0.242780636154981,0.302323556964751,1.88605079755898,0.295301892880773,0.614870295887855,1.29214146584111,0.363533729477506,1.06949213515416,0.948110273807448,1.05418608574999,1.03135543248187,2.7235168460303,0.540183282093931,0.129358683782755,0.857348140126369,1.06404140185364,2.85390108163313,1.64549020602121,1.2178597964584,2.81606049676452,0.42366414172764,1.54369878638473,0.49465875882444,0.484393280087717,1.02531972377865,0.477489376012546,0.984845398470368,4.37221254944776,4.63563255026274,0.683483523191411,0.206386867963223,0.555583582109135,1.31857919903284,1.23024804948923,0.915112692826091,1.18984900995699,0.69975726161829,0.276399947608848,1.90934123603023,0.316335993581135,0.813277868507395,1.62008011232702,1.67270636811575,0.87345025498471,2.02296519577231,1.40510874733071,0.785267825952089,1.8146096260851,1.24267862617385,1.12738587736838,0.448549638131936,0.165458490457098,1.55560950675238,0.129159823477731,2.87225413334323,4.45957506853865,3.25510962109875,1.46803082195995,2.89900944991207,1.72818003754719,0.316011120628178,0.405450430580328,1.23253148597793,1.16928740680016,0.358053391334963,0.596044064343795,0.360586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| ||
|short_description=p@chr18:36447599..36447612,+ | |||
}} | }} |
Latest revision as of 17:16, 5 August 2015
Short description: | p@chr18:36447599..36447612, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:36447599..36447612, + |
Coexpression cluster: | MCL_coexpression_mm9:186 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.07e-10 | 54 |
tube | 2.86e-10 | 114 |
anatomical conduit | 1.05e-09 | 122 |
neural tube | 1.85e-09 | 52 |
neural rod | 1.85e-09 | 52 |
future spinal cord | 1.85e-09 | 52 |
neural keel | 1.85e-09 | 52 |
occipital lobe | 3.92e-09 | 10 |
visual cortex | 3.92e-09 | 10 |
neocortex | 3.92e-09 | 10 |
brain | 1.19e-08 | 47 |
future brain | 1.19e-08 | 47 |
regional part of brain | 3.93e-08 | 46 |
structure with developmental contribution from neural crest | 1.08e-07 | 92 |
neurectoderm | 1.36e-07 | 64 |
neural plate | 1.36e-07 | 64 |
presumptive neural plate | 1.36e-07 | 64 |
central nervous system | 2.36e-07 | 73 |
anterior neural tube | 3.91e-07 | 40 |
gray matter | 6.47e-07 | 34 |
regional part of forebrain | 9.41e-07 | 39 |
forebrain | 9.41e-07 | 39 |
future forebrain | 9.41e-07 | 39 |
nervous system | 9.64e-07 | 75 |