FFCP PHASE1:Mm9::chr15:81575472..81575481,+: Difference between revisions
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{{FFCP|EntrezGene=20286|HGNC=|MCL_coexpression_id=13|UniProt=F8VPP8,Q3UGE6|association_with_transcript=194bp_to_ENSMUST00000109554,NM_001081016,uc007wxd.1,uc007wxe.1_5end|description=CAGE_peak_4_at_Zc3h7b_5end|id=chr15:81575472..81575481,+|ontology_enrichment_celltype=CL:0000117!1.09e-14!23;CL:0000337!1.09e-14!23;CL:0000540!2.77e-13!33;CL:0000047!2.77e-13!33;CL:0000031!2.77e-13!33;CL:0000404!2.77e-13!33;CL:0000393!7.61e-12!39;CL:0000211!7.61e-12!39;CL:0002319!2.72e-11!43;CL:0000221!3.78e-11!44;CL:0000133!3.78e-11!44;CL:0000055!9.78e-11!50|ontology_enrichment_celltype_v019_2=CL:0000117,9.03e-33,23;CL:0000337,9.03e-33,23;CL:0000540,9.90e-21,33;CL:0000047,9.90e-21,33;CL:0000031,9.90e-21,33;CL:0000404,9.90e-21,33;CL:0002319,6.66e-19,43;CL:0000221,2.66e-18,44;CL:0000133,2.66e-18,44;CL:0000393,3.18e-18,39;CL:0000211,3.18e-18,39;CL:0002321,9.44e-12,70;CL:0002609,5.86e-09,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.42e-22!73;UBERON:0005743!5.42e-22!73;UBERON:0000073!2.13e-21!75;UBERON:0001016!2.13e-21!75;UBERON:0001049!3.65e-19!52;UBERON:0005068!3.65e-19!52;UBERON:0006241!3.65e-19!52;UBERON:0007135!3.65e-19!52;UBERON:0004121!2.86e-18!102;UBERON:0000924!2.86e-18!102;UBERON:0006601!2.86e-18!102;UBERON:0002346!7.68e-18!71;UBERON:0003075!7.68e-18!71;UBERON:0007284!7.68e-18!71;UBERON:0000955!1.07e-17!50;UBERON:0006238!1.07e-17!50;UBERON:0002616!3.51e-17!49;UBERON:0000033!3.96e-17!63;UBERON:0002020!5.29e-16!34;UBERON:0003056!5.80e-16!49;UBERON:0003080!2.43e-15!40;UBERON:0002780!9.69e-15!39;UBERON:0001890!9.69e-15!39;UBERON:0006240!9.69e-15!39;UBERON:0002791!1.06e-12!29;UBERON:0003528!1.06e-12!29;UBERON:0001893!1.06e-12!29;UBERON:0000153!4.21e-12!94;UBERON:0007811!4.51e-11!86;UBERON:0000956!1.68e-08!21;UBERON:0001869!1.68e-08!21;UBERON:0000203!1.68e-08!21|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.27e-26,34;UBERON:0000073,1.14e-24,54;UBERON:0001017,1.31e-22,73;UBERON:0001016,1.01e-21,75;UBERON:0001049,8.43e-21,52;UBERON:0005068,8.43e-21,52;UBERON:0006241,8.43e-21,52;UBERON:0007135,8.43e-21,52;UBERON:0003528,2.05e-19,29;UBERON:0002791,2.05e-19,29;UBERON:0001893,2.05e-19,29;UBERON:0002346,8.08e-18,64;UBERON:0003075,8.08e-18,64;UBERON:0007284,8.08e-18,64;UBERON:0004121,4.32e-17,95;UBERON:0000924,4.32e-17,95;UBERON:0006601,4.32e-17,95;UBERON:0003080,4.50e-17,40;UBERON:0000955,2.86e-16,47;UBERON:0006238,2.86e-16,47;UBERON:0002780,6.18e-16,39;UBERON:0001890,6.18e-16,39;UBERON:0006240,6.18e-16,39;UBERON:0002616,2.42e-15,46;UBERON:0003056,2.86e-15,49;UBERON:0010371,1.63e-14,73;UBERON:0000956,6.20e-12,21;UBERON:0001869,6.20e-12,21;UBERON:0000203,6.20e-12,21;UBERON:0010314,1.23e-10,92;UBERON:0001948,3.77e-09,5;UBERON:0002315,3.77e-09,5;UBERON:0002420,4.64e-09,8;UBERON:0007245,4.64e-09,8;UBERON:0010009,4.64e-09,8;UBERON:0010011,4.64e-09,8;UBERON:0000454,4.64e-09,8;UBERON:0002619,4.75e-08,17;UBERON:0002240,1.65e-07,6;UBERON:0005174,1.65e-07,6;UBERON:0001137,1.65e-07,6|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0.0874204024189974,0,0,1.39912375625629,0.315462165358238,0,0.42438965179803,0.17008658030214,0.397163804803541,0.522399578277871,0.159992422793407,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.367093504323363,0,1.30815093828268,0.219686182734472,1.36100929351998,0.139986421625363,0,0.503347818173209,0,0.336093799142464,0.257259436035947,1.43266719969378,0,2.02316460859598,1.5869729378161,1.26766280701236,0.677689064138264,0.889294796111139,0,0,0.7104801149461,0.299600110518405,1.15265491596466,1.8664130215526,1.35005938331691,1.05162480675691,2.85650984403804,2.20868540951614,1.95985278743926,1.24599112323707,1.83843757322004,1.10115880999389,2.29837208553338,1.22885226604995,2.2420668914133,3.29355516968675,3.12548022334056,1.11673199600552,1.12552522006336,1.98637722109853,1.76777151284201,2.84743361598206,1.67759501242771,0.151452386666368,0.302286240427142,0.289864488701678,0.860423876981386,0,1.07940638327563,0,0,0.140444420131752,0.340860645156116,0.779358013808606,0,0.281686839553361,0,0,0,0,1.52015919285059,0,0.22836775943812,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0.301445281105245,0.23517741427141,0.251333182659351,0,0.144599356919912,0,0,0,0,0,0.585561594023094,0.83778682725382,0,0.11981512450592,0,0,1.64769703345305,0.915001205637253,1.00523481690292,1.04294592115366,1.53429274398198,0.83115217823824,0.811206315338788,0.305518091550949,0.124406970610093,0.252722758433675,0.631325567659422,1.04096354370163,0.229902104433473,0.180062129805349,0.30140963567143,0.95251098811859,0.640568601424249,1.49922759295566,0.258703370739016,1.07783996466421,0.945530400839096,0.879755620819744,1.31517439456545,0.278047249225598,0.696504333044333,0.205782136407943,0.796137067273973,0,0.257347907114715,0,0.414251545071004,0.469052119962192,0.180062061461015,0,0.393528463494808,0,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0.243206428637567,0,0,0,0.4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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20286 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F8VPP8,uniprot:Q3UGE6 | |||
|association_with_transcript=194bp_to_ENSMUST00000109554,NM_001081016,uc007wxd.1,uc007wxe.1_5end | |||
|cluster_id=chr15:81575472..81575481,+ | |||
|description=CAGE_peak_4_at_Zc3h7b_5end | |||
|id=chr15:81575472..81575481,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.09e-14!23;CL:0000337!1.09e-14!23;CL:0000540!2.77e-13!33;CL:0000047!2.77e-13!33;CL:0000031!2.77e-13!33;CL:0000404!2.77e-13!33;CL:0000393!7.61e-12!39;CL:0000211!7.61e-12!39;CL:0002319!2.72e-11!43;CL:0000221!3.78e-11!44;CL:0000133!3.78e-11!44;CL:0000055!9.78e-11!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.03e-33,23;CL:0000337,9.03e-33,23;CL:0000540,9.90e-21,33;CL:0000047,9.90e-21,33;CL:0000031,9.90e-21,33;CL:0000404,9.90e-21,33;CL:0002319,6.66e-19,43;CL:0000221,2.66e-18,44;CL:0000133,2.66e-18,44;CL:0000393,3.18e-18,39;CL:0000211,3.18e-18,39;CL:0002321,9.44e-12,70;CL:0002609,5.86e-09,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.42e-22!73;UBERON:0005743!5.42e-22!73;UBERON:0000073!2.13e-21!75;UBERON:0001016!2.13e-21!75;UBERON:0001049!3.65e-19!52;UBERON:0005068!3.65e-19!52;UBERON:0006241!3.65e-19!52;UBERON:0007135!3.65e-19!52;UBERON:0004121!2.86e-18!102;UBERON:0000924!2.86e-18!102;UBERON:0006601!2.86e-18!102;UBERON:0002346!7.68e-18!71;UBERON:0003075!7.68e-18!71;UBERON:0007284!7.68e-18!71;UBERON:0000955!1.07e-17!50;UBERON:0006238!1.07e-17!50;UBERON:0002616!3.51e-17!49;UBERON:0000033!3.96e-17!63;UBERON:0002020!5.29e-16!34;UBERON:0003056!5.80e-16!49;UBERON:0003080!2.43e-15!40;UBERON:0002780!9.69e-15!39;UBERON:0001890!9.69e-15!39;UBERON:0006240!9.69e-15!39;UBERON:0002791!1.06e-12!29;UBERON:0003528!1.06e-12!29;UBERON:0001893!1.06e-12!29;UBERON:0000153!4.21e-12!94;UBERON:0007811!4.51e-11!86;UBERON:0000956!1.68e-08!21;UBERON:0001869!1.68e-08!21;UBERON:0000203!1.68e-08!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.27e-26,34;UBERON:0000073,1.14e-24,54;UBERON:0001017,1.31e-22,73;UBERON:0001016,1.01e-21,75;UBERON:0001049,8.43e-21,52;UBERON:0005068,8.43e-21,52;UBERON:0006241,8.43e-21,52;UBERON:0007135,8.43e-21,52;UBERON:0003528,2.05e-19,29;UBERON:0002791,2.05e-19,29;UBERON:0001893,2.05e-19,29;UBERON:0002346,8.08e-18,64;UBERON:0003075,8.08e-18,64;UBERON:0007284,8.08e-18,64;UBERON:0004121,4.32e-17,95;UBERON:0000924,4.32e-17,95;UBERON:0006601,4.32e-17,95;UBERON:0003080,4.50e-17,40;UBERON:0000955,2.86e-16,47;UBERON:0006238,2.86e-16,47;UBERON:0002780,6.18e-16,39;UBERON:0001890,6.18e-16,39;UBERON:0006240,6.18e-16,39;UBERON:0002616,2.42e-15,46;UBERON:0003056,2.86e-15,49;UBERON:0010371,1.63e-14,73;UBERON:0000956,6.20e-12,21;UBERON:0001869,6.20e-12,21;UBERON:0000203,6.20e-12,21;UBERON:0010314,1.23e-10,92;UBERON:0001948,3.77e-09,5;UBERON:0002315,3.77e-09,5;UBERON:0002420,4.64e-09,8;UBERON:0007245,4.64e-09,8;UBERON:0010009,4.64e-09,8;UBERON:0010011,4.64e-09,8;UBERON:0000454,4.64e-09,8;UBERON:0002619,4.75e-08,17;UBERON:0002240,1.65e-07,6;UBERON:0005174,1.65e-07,6;UBERON:0001137,1.65e-07,6 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0.0874204024189974,0,0,1.39912375625629,0.315462165358238,0,0.42438965179803,0.17008658030214,0.397163804803541,0.522399578277871,0.159992422793407,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.367093504323363,0,1.30815093828268,0.219686182734472,1.36100929351998,0.139986421625363,0,0.503347818173209,0,0.336093799142464,0.257259436035947,1.43266719969378,0,2.02316460859598,1.5869729378161,1.26766280701236,0.677689064138264,0.889294796111139,0,0,0.7104801149461,0.299600110518405,1.15265491596466,1.8664130215526,1.35005938331691,1.05162480675691,2.85650984403804,2.20868540951614,1.95985278743926,1.24599112323707,1.83843757322004,1.10115880999389,2.29837208553338,1.22885226604995,2.2420668914133,3.29355516968675,3.12548022334056,1.11673199600552,1.12552522006336,1.98637722109853,1.76777151284201,2.84743361598206,1.67759501242771,0.151452386666368,0.302286240427142,0.289864488701678,0.860423876981386,0,1.07940638327563,0,0,0.140444420131752,0.340860645156116,0.779358013808606,0,0.281686839553361,0,0,0,0,1.52015919285059,0,0.22836775943812,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0.301445281105245,0.23517741427141,0.251333182659351,0,0.144599356919912,0,0,0,0,0,0.585561594023094,0.83778682725382,0,0.11981512450592,0,0,1.64769703345305,0.915001205637253,1.00523481690292,1.04294592115366,1.53429274398198,0.83115217823824,0.811206315338788,0.305518091550949,0.124406970610093,0.252722758433675,0.631325567659422,1.04096354370163,0.229902104433473,0.180062129805349,0.30140963567143,0.95251098811859,0.640568601424249,1.49922759295566,0.258703370739016,1.07783996466421,0.945530400839096,0.879755620819744,1.31517439456545,0.278047249225598,0.696504333044333,0.205782136407943,0.796137067273973,0,0.257347907114715,0,0.414251545071004,0.469052119962192,0.180062061461015,0,0.393528463494808,0,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0.243206428637567,0,0,0,0.420579897128254,0.823236899034275,0,0,1.70630600428187,0.232236671860439,0.644337306610467,0.403367049246685,0,0.190225626112559,0.474529061544512,0,0,0.198956472041151,0,0,0,0,1.32767530667157,0.228497025219458,2.25415471346161,0.407302655690628,0.581857461502877,0.210407459670956,0,0.590440591918409,0.156998727841375,0.246794327843601,0,0.166845105716094,0.393117990226406,0.449724224769707,0.202860121388503,0,0,0,0,0,0,0.372140947668503,0,0.252578877947112,0.179397413521912,0,0.369506380333209,0.37898282354097,0.488894929326078,0.169745085775188,0.234690248288502,0,0.238043640886014,0.390267295715598,0,0.221464689648775,0.159454768657487,0.491589944147214,0.172684981865896,0,0,0,0,0.275936746304732,0.481651769963376,0.468846746368813,0.163934945376675,0,0.315508219416257,0.390438744296638,0.430846795465598,0.238968797952552,0.445597348164788,0.849229592366497,0.404810701674894,0.584511715822624,0.395287777946524,1.28528526568723,0,0.35613120733451,0.162886959353576,0,1.32745138339963,0,0.302323556964751,0,0,0,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,1.62054984628179,0.776152102696527,0.214337035031592,0.709360934569094,1.24858172321449,0.493647061806363,0.913394847343798,0,0.21183207086382,0,0.32977250588296,0.484393280087717,0.0603129249281559,0.358117032009409,0.164140899745061,0,0.741701208042039,0,0.206386867963223,0.370389054739423,0.188368457004691,0.27338845544205,0,0.169978429993855,0,0,0,0.158167996790568,0.406638934253697,0.324016022465404,0,0,0.539457385539283,0.41326727862668,0,0,0,0.56369293868419,0.598066184175915,0.992750942742586,0.972255941720238,1.42075805825504,1.01373675294467,1.05621514781179,1.3020438484395,1.15345278868282,0.483168241652012,0.288030006257865,0,0.608175645870493,0.205421914329655,0.77952493786677,0.716106782669926,0.596044064343795,0.480781798079875,0.295379054349154,0,0.304827226619999,0.201652370273681,0.194915761479505,0.192423683280659,0.584384510907845,0.453460767230423,0.665957860122194,0.0897138566094757,0.167884616364078,0.19318959403219,0,0.183151624267265,0.214368379079066,0,3.95326289831947,0.920650473014354,2.29158205375759,0.859265911718438,2.74033007908257,1.5107877947794,0,1.35096360967266,1.81256963593682,0.51776031175182,0.830298780673413,2.39414924040619,1.02440163452481,0.729320151204882,0.419226325255965,0.735374033800057,0.222246727801615,0.618105171716683,0,1.01078884705519,0,0,0.37456602987953,0.768301828858431,0.17230640686684,1.42888107384922,0.231768651889711,0.38581844092741,0.824171801606613,0.441596760403192,0.342869252385415,0.70990322463735,0.238436189947321,0,0.564656282491984,0.169229215783353,0.182927972872773,0.526139422875686,0.543216455383447,0.561142271657738,0.474540072496697,0.29551344712669,0.409231043169689,0.619747364743864,0.771626443924566,1.24905288968973,0.233931608445408,0.429742108096597,0,0.220591419119515,0 | |||
|short_description=p4@Zc3h7b | |||
}} |
Revision as of 16:45, 5 August 2015
Short description: | p4@Zc3h7b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Zc3h7b_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 194bp_to_ENSMUST00000109554, NM_001081016, uc007wxd.1, uc007wxe.1_5end |
EntrezGene: | 20286 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.03e-33 | 23 |
neuroblast (sensu Vertebrata) | 9.03e-33 | 23 |
neuron | 9.90e-21 | 33 |
neuronal stem cell | 9.90e-21 | 33 |
neuroblast | 9.90e-21 | 33 |
electrically signaling cell | 9.90e-21 | 33 |
neural cell | 6.66e-19 | 43 |
ectodermal cell | 2.66e-18 | 44 |
neurectodermal cell | 2.66e-18 | 44 |
electrically responsive cell | 3.18e-18 | 39 |
electrically active cell | 3.18e-18 | 39 |
embryonic cell | 9.44e-12 | 70 |
neuron of cerebral cortex | 5.86e-09 | 6 |