FFCP PHASE1:Mm9::chr15:80150687..80150734,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=18 | |MCL_coexpression_id=18 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:80150687..80150734,+ | |||
|description=CAGE_peak_at_chr15:80150687..80150734,+ | |description=CAGE_peak_at_chr15:80150687..80150734,+ | ||
|id=chr15:80150687..80150734,+ | |id=chr15:80150687..80150734,+ | ||
|ontology_enrichment_celltype=CL:0000553!2.88e-09!6;CL:0000556!2.88e-09!6 | |ontology_enrichment_celltype=CL:0000553!2.88e-09!6;CL:0000556!2.88e-09!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,6.70e-29,6;CL:0000556,6.70e-29,6;CL:0000050,2.64e-19,9;CL:0000839,2.24e-13,13;CL:0000763,7.27e-11,16;CL:0002027,6.83e-10,3;CL:0002006,6.83e-10,3;CL:0002024,6.83e-10,3;CL:0002031,9.50e-10,25;CL:0000049,3.84e-09,19;CL:0000945,2.98e-08,1;CL:0000236,2.98e-08,1;CL:0000826,2.98e-08,1;CL:0000988,1.52e-07,32;CL:0002032,1.52e-07,32;CL:0000037,1.52e-07,32;CL:0000837,1.52e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003887!8.78e-07!10 | |ontology_enrichment_uberon=UBERON:0003887!8.78e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,5.20e-11,22;UBERON:0004765,5.20e-11,22;UBERON:0001434,5.20e-11,22;UBERON:0002371,7.27e-11,16;UBERON:0002193,8.32e-11,48;UBERON:0002405,8.32e-11,48;UBERON:0002106,9.47e-11,6;UBERON:0004457,9.47e-11,6;UBERON:0000042,9.47e-11,6;UBERON:0004854,9.47e-11,6;UBERON:0009034,9.47e-11,6;UBERON:0002095,9.47e-11,6;UBERON:0004782,9.47e-11,6;UBERON:0003281,9.47e-11,6;UBERON:0009664,9.47e-11,6;UBERON:0002296,9.47e-11,6;UBERON:0005602,9.47e-11,6;UBERON:0001179,9.47e-11,6;UBERON:0006293,9.47e-11,6;UBERON:0002390,4.21e-09,45;UBERON:0003061,4.21e-09,45;UBERON:0000029,2.16e-08,1;UBERON:0001097,2.16e-08,1;UBERON:0003968,2.16e-08,1;UBERON:0001467,2.16e-08,1;UBERON:0002204,1.80e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,3.33109761815663,3.44207954562704,0,13.5648731104042,16.3166175990829,16.9755860719212,0,0,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4092172119261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,13.7237078333001,0.148442139064825,0,0,0,0,0,0,0,0.289198713839823,1.76922110389975,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622034853050465,0.252722758433675,0.210441855886474,0.130120442962704,0,0.180062129805349,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0.465067889500816,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0.167506257441816,0,0,0,0,0.478364305972461,0.81931657357869,1.55416483679306,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0.220528398054962,0,0,0,0,0,0,0,3.58828849675491,0,0,0.376736914009382,4.64760374251486,2.28778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,3.33109761815663,3.44207954562704,0,13.5648731104042,16.3166175990829,16.9755860719212,0,0,0,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4092172119261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,13.7237078333001,0.148442139064825,0,0,0,0,0,0,0,0.289198713839823,1.76922110389975,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622034853050465,0.252722758433675,0.210441855886474,0.130120442962704,0,0.180062129805349,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0.465067889500816,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0.167506257441816,0,0,0,0,0.478364305972461,0.81931657357869,1.55416483679306,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0.220528398054962,0,0,0,0,0,0,0,3.58828849675491,0,0,0.376736914009382,4.64760374251486,2.28778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p@chr15:80150687..80150734,+ | |short_description=p@chr15:80150687..80150734,+ | ||
}} | }} |
Latest revision as of 16:08, 5 August 2015
Short description: | p@chr15:80150687..80150734, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:80150687..80150734, + |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 6.70e-29 | 6 |
megakaryocyte | 6.70e-29 | 6 |
megakaryocyte-erythroid progenitor cell | 2.64e-19 | 9 |
myeloid lineage restricted progenitor cell | 2.24e-13 | 13 |
myeloid cell | 7.27e-11 | 16 |
CD9-positive, CD41-positive megakaryocyte cell | 6.83e-10 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 6.83e-10 | 3 |
Kit-positive megakaryocyte progenitor cell | 6.83e-10 | 3 |
hematopoietic lineage restricted progenitor cell | 9.50e-10 | 25 |
common myeloid progenitor | 3.84e-09 | 19 |
lymphocyte of B lineage | 2.98e-08 | 1 |
B cell | 2.98e-08 | 1 |
pro-B cell | 2.98e-08 | 1 |
hematopoietic cell | 1.52e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.52e-07 | 32 |
hematopoietic stem cell | 1.52e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.52e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
bone element | 5.20e-11 | 22 |
skeletal element | 5.20e-11 | 22 |
skeletal system | 5.20e-11 | 22 |
bone marrow | 7.27e-11 | 16 |
hemolymphoid system | 8.32e-11 | 48 |
immune system | 8.32e-11 | 48 |
spleen | 9.47e-11 | 6 |
cavity lining | 9.47e-11 | 6 |
serous membrane | 9.47e-11 | 6 |
gastrointestinal system mesentery | 9.47e-11 | 6 |
stomach region | 9.47e-11 | 6 |
mesentery | 9.47e-11 | 6 |
gastrointestinal system serosa | 9.47e-11 | 6 |
mesentery of stomach | 9.47e-11 | 6 |
gut mesentery | 9.47e-11 | 6 |
dorsal mesentery | 9.47e-11 | 6 |
dorsal mesogastrium | 9.47e-11 | 6 |
peritoneal cavity | 9.47e-11 | 6 |
spleen primordium | 9.47e-11 | 6 |
hematopoietic system | 4.21e-09 | 45 |
blood island | 4.21e-09 | 45 |
lymph node | 2.16e-08 | 1 |
axillary lymph node | 2.16e-08 | 1 |
peripheral lymph node | 2.16e-08 | 1 |
shoulder | 2.16e-08 | 1 |
musculoskeletal system | 1.80e-07 | 32 |