FFCP PHASE1:Mm9::chr15:80150611..80150633,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:80150611..80150633,+ | |||
|description=CAGE_peak_at_chr15:80150611..80150633,+ | |description=CAGE_peak_at_chr15:80150611..80150633,+ | ||
|id=chr15:80150611..80150633,+ | |id=chr15:80150611..80150633,+ | ||
|ontology_enrichment_celltype=CL:0000553!3.57e-18!6;CL:0000556!3.57e-18!6;CL:0000050!7.01e-12!9;CL:0000414!1.37e-09!11;CL:0002027!1.58e-09!3;CL:0002006!1.58e-09!3;CL:0002024!1.58e-09!3;CL:0000839!5.32e-08!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.37e-37,6;CL:0000556,2.37e-37,6;CL:0000050,7.33e-25,9;CL:0002027,1.11e-18,3;CL:0002006,1.11e-18,3;CL:0002024,1.11e-18,3;CL:0000839,3.75e-17,13;CL:0000763,6.87e-14,16;CL:0002031,6.58e-12,25;CL:0000049,1.19e-11,19;CL:0000988,3.52e-09,32;CL:0002032,3.52e-09,32;CL:0000037,3.52e-09,32;CL:0000837,3.52e-09,32;CL:0000945,6.29e-08,1;CL:0000236,6.29e-08,1;CL:0000826,6.29e-08,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.89e-08!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.87e-14,16;UBERON:0002193,3.88e-12,48;UBERON:0002405,3.88e-12,48;UBERON:0002390,2.05e-10,45;UBERON:0003061,2.05e-10,45;UBERON:0002106,4.75e-10,6;UBERON:0004457,4.75e-10,6;UBERON:0000042,4.75e-10,6;UBERON:0004854,4.75e-10,6;UBERON:0009034,4.75e-10,6;UBERON:0002095,4.75e-10,6;UBERON:0004782,4.75e-10,6;UBERON:0003281,4.75e-10,6;UBERON:0009664,4.75e-10,6;UBERON:0002296,4.75e-10,6;UBERON:0005602,4.75e-10,6;UBERON:0001179,4.75e-10,6;UBERON:0006293,4.75e-10,6;UBERON:0001474,5.07e-10,22;UBERON:0004765,5.07e-10,22;UBERON:0001434,5.07e-10,22;UBERON:0000029,4.65e-08,1;UBERON:0001097,4.65e-08,1;UBERON:0003968,4.65e-08,1;UBERON:0001467,4.65e-08,1;UBERON:0001044,1.14e-07,1;UBERON:0001736,1.14e-07,1;UBERON:0003293,1.14e-07,1;UBERON:0003294,1.14e-07,1;UBERON:0001829,1.14e-07,1;UBERON:0010047,1.14e-07,1;UBERON:0000167,1.14e-07,1;UBERON:0006298,1.14e-07,1;UBERON:0002204,8.85e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33243904726265,1.01237633694913,1.39912375625629,8.99067171270977,11.6547268564878,6.79023442876848,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.56360854529097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,12.1700805314171,0.29688427812965,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268412837520744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,2.03228509183265,0,0,0,0,0,0,0,0,0,0,0.655453258862952,0.863424909329478,0.144649058581512,0,0,0,1.10374698521893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0.291480836629851,0,4.61351378154202,0,0,0,2.46049609897845,1.60144721244566,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,2.4853572523477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33243904726265,1.01237633694913,1.39912375625629,8.99067171270977,11.6547268564878,6.79023442876848,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.56360854529097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,12.1700805314171,0.29688427812965,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268412837520744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,2.03228509183265,0,0,0,0,0,0,0,0,0,0,0.655453258862952,0.863424909329478,0.144649058581512,0,0,0,1.10374698521893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0.291480836629851,0,4.61351378154202,0,0,0,2.46049609897845,1.60144721244566,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,2.4853572523477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:80150611..80150633,+ | |short_description=p@chr15:80150611..80150633,+ | ||
}} | }} |
Latest revision as of 16:07, 5 August 2015
Short description: | p@chr15:80150611..80150633, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:80150611..80150633, + |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.37e-37 | 6 |
megakaryocyte | 2.37e-37 | 6 |
megakaryocyte-erythroid progenitor cell | 7.33e-25 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 1.11e-18 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.11e-18 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.11e-18 | 3 |
myeloid lineage restricted progenitor cell | 3.75e-17 | 13 |
myeloid cell | 6.87e-14 | 16 |
hematopoietic lineage restricted progenitor cell | 6.58e-12 | 25 |
common myeloid progenitor | 1.19e-11 | 19 |
hematopoietic cell | 3.52e-09 | 32 |
hematopoietic oligopotent progenitor cell | 3.52e-09 | 32 |
hematopoietic stem cell | 3.52e-09 | 32 |
hematopoietic multipotent progenitor cell | 3.52e-09 | 32 |
lymphocyte of B lineage | 6.29e-08 | 1 |
B cell | 6.29e-08 | 1 |
pro-B cell | 6.29e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.87e-14 | 16 |
hemolymphoid system | 3.88e-12 | 48 |
immune system | 3.88e-12 | 48 |
hematopoietic system | 2.05e-10 | 45 |
blood island | 2.05e-10 | 45 |
spleen | 4.75e-10 | 6 |
cavity lining | 4.75e-10 | 6 |
serous membrane | 4.75e-10 | 6 |
gastrointestinal system mesentery | 4.75e-10 | 6 |
stomach region | 4.75e-10 | 6 |
mesentery | 4.75e-10 | 6 |
gastrointestinal system serosa | 4.75e-10 | 6 |
mesentery of stomach | 4.75e-10 | 6 |
gut mesentery | 4.75e-10 | 6 |
dorsal mesentery | 4.75e-10 | 6 |
dorsal mesogastrium | 4.75e-10 | 6 |
peritoneal cavity | 4.75e-10 | 6 |
spleen primordium | 4.75e-10 | 6 |
bone element | 5.07e-10 | 22 |
skeletal element | 5.07e-10 | 22 |
skeletal system | 5.07e-10 | 22 |
lymph node | 4.65e-08 | 1 |
axillary lymph node | 4.65e-08 | 1 |
peripheral lymph node | 4.65e-08 | 1 |
shoulder | 4.65e-08 | 1 |
saliva-secreting gland | 1.14e-07 | 1 |
submandibular gland | 1.14e-07 | 1 |
gland of oral region | 1.14e-07 | 1 |
gland of foregut | 1.14e-07 | 1 |
major salivary gland | 1.14e-07 | 1 |
oral gland | 1.14e-07 | 1 |
oral cavity | 1.14e-07 | 1 |
submandibular gland primordium | 1.14e-07 | 1 |
musculoskeletal system | 8.85e-07 | 32 |