Personal tools

FFCP PHASE1:Mm9::chr18:33623475..33623510,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=27528|HGNC=|MCL_coexpression_id=22|UniProt=Q07475,Q542Q5|association_with_transcript=-74bp_to_ENSMUST00000171533,NM_001109989,uc012bav.1_5end|description=CAGE_peak_8_at_D0H4S114_5end|id=chr18:33623475..33623510,-|ontology_enrichment_celltype=CL:0000117!2.67e-08!23;CL:0000337!2.67e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,8.72e-09,23;CL:0000337,8.72e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!7.52e-09!333;UBERON:0002346!2.61e-07!71;UBERON:0003075!2.61e-07!71;UBERON:0007284!2.61e-07!71;UBERON:0003056!4.79e-07!49;UBERON:0000922!7.04e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0000020,2.33e-07,12;UBERON:0001032,2.33e-07,12;UBERON:0004456,2.33e-07,12;UBERON:0000970,6.46e-07,9;UBERON:0000019,6.46e-07,9;UBERON:0000047,6.46e-07,9;UBERON:0010312,6.46e-07,9;UBERON:0004088,6.46e-07,9;UBERON:0002104,6.46e-07,9;UBERON:0001456,6.46e-07,9;UBERON:0003072,6.46e-07,9;UBERON:0004128,6.46e-07,9;UBERON:0003071,6.46e-07,9|phase1_expression=4.96461426024861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,11.5320382689971,15.869729378161,13.3104594736298,0,0,0,0,0,0,0,1.03689612308478,1.75507719831198,1.68259969081106,5.42736870367227,6.40518768759679,3.91970557487853,3.25874601462004,0.919218786610021,0,0.893811366596314,0.153606533256243,16.8814448294648,14.6380229763855,15.106487746146,1.3959149950069,0.56276261003168,0.30559649555362,4.71405736757868,6.69146899755784,11.183966749518,0,0.0755715601067855,0.289864488701678,0.860423876981386,0,0,0,0,0,0.170430322578058,0,0.35333957451034,2.25349471642689,0,2.54805239706646,0,0,0,0,0.11418387971906,0,0,0.693941307064543,0.608930956624282,0.461230994512117,1.50722640552623,0.705532242814229,0.376999773989026,0.247194967734374,0,0,0.970601099684455,0.220841518460394,0,0,0,0.41889341362691,0,0,0,0,0.449371918214468,0.457500602818626,6.03140890141749,0.347648640384553,1.53429274398198,0.62336413367868,1.1356888414743,2.44414473240759,0.373220911830279,0,0.210441855886474,5.59517904739626,2.98872735763515,4.50155324513373,4.37043971723574,5.64702942956021,5.63700369253339,5.43470002446427,3.10444044886819,4.095791865724,1.70195472151037,1.23165786914764,1.09597866213787,1.11218899690239,0.348252166522167,0.411564272815887,1.59227413454795,0,0,0,1.44988040774851,1.17263029990548,1.44049649168812,1.42046841351126,0.393528463494808,1.23413690309903,0.232533944750408,1.07309360559848,0.700592054203017,1.6455984991348,1.31333971263276,0.729619285912702,0.438599962275997,0.439100230582101,0.268412837520744,0.420579897128254,3.08713837137853,0,0.264450566663544,2.34617075588757,2.09013004674395,1.28867461322093,0.80673409849337,2.44615848229357,0.570676878337677,0,1.15289268306808,1.50801125280162,1.79060824837036,1.75467678407208,0.898819408654221,0,0.199141273254367,2.46568271239006,3.99869794134051,4.50830942692322,2.64746726198909,2.90928730751439,2.52488951605147,1.83385957660346,0.590440591918409,0.627994911365499,0,0,0,0,0.224862112384854,0.405720242777006,0.482354319504834,0.50925170356284,0.575392274901621,0,0.823684239564244,0,1.86070473834252,0.624075346229121,1.26289438973556,0.538192240565737,0,0.369506380333209,1.32643988239339,0.814824882210129,1.18821560042632,1.87752198630802,0.837531287209079,1.6663054862021,1.36593553500459,1.41871629695572,1.32878813789265,1.75400245523236,0.163863314715738,0.172684981865896,0.578596234326046,0,0,0,0.551873492609465,0.80275294993896,0.820481806145422,0,0.252470927204373,0.315508219416257,0.390438744296638,0.215423397732799,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0.790575555893047,2.24924921495265,0.709700426041343,1.06839362200353,1.62886959353576,0.164970122972535,0,0.971122544619926,1.81394134178851,0.943025398779491,0.295301892880773,1.22974059177571,0.775284879504663,1.81766864738753,2.85197902707777,0.948110273807448,0,0,1.02131881726136,2.52085531643834,2.19909762430683,0,0.709360934569094,0.891844088010353,0.493647061806363,0,0.23467170806371,0,0,0.16488625294148,0.807322133479528,0.784068024066026,0.954978752025092,0.164140899745061,0.291480836629851,0.741701208042039,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,2.84702394223022,0.609958401380546,1.62008011232702,1.67270636811575,1.09181281873089,0.944050424693745,0.826534557253359,0.26175594198403,0.777689839750757,0,0,1.79419855252775,1.15820943319968,1.94451188344048,0.904118764344118,1.35164900392623,0.938857909166032,0.5208175393758,0.314578033277133,0,0,0,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0.147689527174577,0.403865799792591,0.15241361331,0,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0.564751842617067,1.84130094602871,1.14579102687879,1.3748254587495,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0,0.51776031175182,7.78405106881325,3.99024873401031,2.39027048055788,2.67417388775123,2.93458427679175,1.65459157605013,0.44449345560323,0.824140228955577,1.28367683836726,1.51618327058278,1.01391719956096,1.50901073108861,0.749132059759059,0.768301828858431,1.32101578597911,1.42888107384922,1.27472758539341,1.15745532278223,2.06042950401653,1.91358596174717,1.37147700954166,1.06485483695602,2.14592570952589,1.59881058295561,1.41164070622996,1.60767754994185,1.46342378298218,1.31534855718921,2.03706170768793,1.12228454331548,1.54225523561426,1.47756723563345,0.818462086339379,1.39443157067369,1.54325288784913,1.99848462350357,1.63752125911786,1.28922632428979,0.765153328275374,0.882365676478062,0.231867835620421|short_description=p8@D0H4S114}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:27528
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=uniprot:Q07475,uniprot:Q542Q5
|association_with_transcript=-74bp_to_ENSMUST00000171533,NM_001109989,uc012bav.1_5end
|cluster_id=chr18:33623475..33623510,-
|description=CAGE_peak_8_at_D0H4S114_5end
|id=chr18:33623475..33623510,-
|ontology_enrichment_celltype=CL:0000117!2.67e-08!23;CL:0000337!2.67e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,8.72e-09,23;CL:0000337,8.72e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!7.52e-09!333;UBERON:0002346!2.61e-07!71;UBERON:0003075!2.61e-07!71;UBERON:0007284!2.61e-07!71;UBERON:0003056!4.79e-07!49;UBERON:0000922!7.04e-07!328
|ontology_enrichment_uberon_v019_2=UBERON:0000020,2.33e-07,12;UBERON:0001032,2.33e-07,12;UBERON:0004456,2.33e-07,12;UBERON:0000970,6.46e-07,9;UBERON:0000019,6.46e-07,9;UBERON:0000047,6.46e-07,9;UBERON:0010312,6.46e-07,9;UBERON:0004088,6.46e-07,9;UBERON:0002104,6.46e-07,9;UBERON:0001456,6.46e-07,9;UBERON:0003072,6.46e-07,9;UBERON:0004128,6.46e-07,9;UBERON:0003071,6.46e-07,9
|phase1_expression=4.96461426024861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,11.5320382689971,15.869729378161,13.3104594736298,0,0,0,0,0,0,0,1.03689612308478,1.75507719831198,1.68259969081106,5.42736870367227,6.40518768759679,3.91970557487853,3.25874601462004,0.919218786610021,0,0.893811366596314,0.153606533256243,16.8814448294648,14.6380229763855,15.106487746146,1.3959149950069,0.56276261003168,0.30559649555362,4.71405736757868,6.69146899755784,11.183966749518,0,0.0755715601067855,0.289864488701678,0.860423876981386,0,0,0,0,0,0.170430322578058,0,0.35333957451034,2.25349471642689,0,2.54805239706646,0,0,0,0,0.11418387971906,0,0,0.693941307064543,0.608930956624282,0.461230994512117,1.50722640552623,0.705532242814229,0.376999773989026,0.247194967734374,0,0,0.970601099684455,0.220841518460394,0,0,0,0.41889341362691,0,0,0,0,0.449371918214468,0.457500602818626,6.03140890141749,0.347648640384553,1.53429274398198,0.62336413367868,1.1356888414743,2.44414473240759,0.373220911830279,0,0.210441855886474,5.59517904739626,2.98872735763515,4.50155324513373,4.37043971723574,5.64702942956021,5.63700369253339,5.43470002446427,3.10444044886819,4.095791865724,1.70195472151037,1.23165786914764,1.09597866213787,1.11218899690239,0.348252166522167,0.411564272815887,1.59227413454795,0,0,0,1.44988040774851,1.17263029990548,1.44049649168812,1.42046841351126,0.393528463494808,1.23413690309903,0.232533944750408,1.07309360559848,0.700592054203017,1.6455984991348,1.31333971263276,0.729619285912702,0.438599962275997,0.439100230582101,0.268412837520744,0.420579897128254,3.08713837137853,0,0.264450566663544,2.34617075588757,2.09013004674395,1.28867461322093,0.80673409849337,2.44615848229357,0.570676878337677,0,1.15289268306808,1.50801125280162,1.79060824837036,1.75467678407208,0.898819408654221,0,0.199141273254367,2.46568271239006,3.99869794134051,4.50830942692322,2.64746726198909,2.90928730751439,2.52488951605147,1.83385957660346,0.590440591918409,0.627994911365499,0,0,0,0,0.224862112384854,0.405720242777006,0.482354319504834,0.50925170356284,0.575392274901621,0,0.823684239564244,0,1.86070473834252,0.624075346229121,1.26289438973556,0.538192240565737,0,0.369506380333209,1.32643988239339,0.814824882210129,1.18821560042632,1.87752198630802,0.837531287209079,1.6663054862021,1.36593553500459,1.41871629695572,1.32878813789265,1.75400245523236,0.163863314715738,0.172684981865896,0.578596234326046,0,0,0,0.551873492609465,0.80275294993896,0.820481806145422,0,0.252470927204373,0.315508219416257,0.390438744296638,0.215423397732799,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0.790575555893047,2.24924921495265,0.709700426041343,1.06839362200353,1.62886959353576,0.164970122972535,0,0.971122544619926,1.81394134178851,0.943025398779491,0.295301892880773,1.22974059177571,0.775284879504663,1.81766864738753,2.85197902707777,0.948110273807448,0,0,1.02131881726136,2.52085531643834,2.19909762430683,0,0.709360934569094,0.891844088010353,0.493647061806363,0,0.23467170806371,0,0,0.16488625294148,0.807322133479528,0.784068024066026,0.954978752025092,0.164140899745061,0.291480836629851,0.741701208042039,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,2.84702394223022,0.609958401380546,1.62008011232702,1.67270636811575,1.09181281873089,0.944050424693745,0.826534557253359,0.26175594198403,0.777689839750757,0,0,1.79419855252775,1.15820943319968,1.94451188344048,0.904118764344118,1.35164900392623,0.938857909166032,0.5208175393758,0.314578033277133,0,0,0,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0.147689527174577,0.403865799792591,0.15241361331,0,0,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0.564751842617067,1.84130094602871,1.14579102687879,1.3748254587495,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0,0.51776031175182,7.78405106881325,3.99024873401031,2.39027048055788,2.67417388775123,2.93458427679175,1.65459157605013,0.44449345560323,0.824140228955577,1.28367683836726,1.51618327058278,1.01391719956096,1.50901073108861,0.749132059759059,0.768301828858431,1.32101578597911,1.42888107384922,1.27472758539341,1.15745532278223,2.06042950401653,1.91358596174717,1.37147700954166,1.06485483695602,2.14592570952589,1.59881058295561,1.41164070622996,1.60767754994185,1.46342378298218,1.31534855718921,2.03706170768793,1.12228454331548,1.54225523561426,1.47756723563345,0.818462086339379,1.39443157067369,1.54325288784913,1.99848462350357,1.63752125911786,1.28922632428979,0.765153328275374,0.882365676478062,0.231867835620421
|short_description=p8@D0H4S114
}}

Revision as of 15:51, 5 August 2015

Short description:p8@D0H4S114
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_D0H4S114_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: -74bp_to_ENSMUST00000171533, NM_001109989, uc012bav.1_5end
EntrezGene:27528
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p8@D0H4S114

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C311.53
Mouse Granule cells, donor2.CNhs12357.11731-123E315.87
Mouse Granule cells, donor3.CNhs12108.11636-122C713.31
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.76
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.41
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.92
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.26
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D416.88
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D815.11
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.18
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F16.03
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.44
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C65.60
eyeball, embryo E14.CNhs10521.399-16E22.99
eyeball, embryo E15.CNhs10593.426-16C94.50
eyeball, embryo E17.CNhs11023.1261-18D44.37
eyeball, neonate N00.CNhs11207.633-15C65.65
eyeball, neonate N01.CNhs11140.1532-43E75.64
eyeball, neonate N02.CNhs11205.1551-44G85.43
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E24.10
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G13.09
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I52.35
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I92.47
kidney, embryo E15.CNhs10997.434-16F84.00
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I22.65
kidney, embryo E18.CNhs11001.1288-20C72.91
kidney, neonate N00.CNhs11214.646-21G72.52
kidney, neonate N10.CNhs11206.758-6D51.83
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E51.42
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E61.75
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.78
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.85
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.79
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I87.78
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)8.72e-0923
neuroblast (sensu Vertebrata)8.72e-0923

Uber anatomy
Ontology termp-valuen
sense organ2.33e-0712
sensory system2.33e-0712
entire sense organ system2.33e-0712
eye6.46e-079
camera-type eye6.46e-079
simple eye6.46e-079
immature eye6.46e-079
ocular region6.46e-079
visual system6.46e-079
face6.46e-079
optic cup6.46e-079
optic vesicle6.46e-079
eye primordium6.46e-079
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr18:33623475..33623510,-&oldid=3916626"