FFCP PHASE1:Mm9::chr13:112658212..112658227,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=48 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=68bp_to_ENSMUST00000128198,uc007rwb.1_5end | |association_with_transcript=68bp_to_ENSMUST00000128198,uc007rwb.1_5end | ||
|cluster_id=chr13:112658212..112658227,+ | |||
|description=CAGE_peak_3_at_ENSMUST00000128198_5end,CAGE_peak_3_at_uc007rwb.1_5end | |description=CAGE_peak_3_at_ENSMUST00000128198_5end,CAGE_peak_3_at_uc007rwb.1_5end | ||
|id=chr13:112658212..112658227,+ | |id=chr13:112658212..112658227,+ | ||
|ontology_enrichment_celltype=CL:0000988!1.41e-07!32;CL:0002032!1.41e-07!32;CL:0000037!1.41e-07!32;CL:0000566!1.41e-07!32;CL:0000837!1.41e-07!32;CL:0000542!4.64e-07!13;CL:0000051!4.64e-07!13;CL:0002031!7.96e-07!25 | |ontology_enrichment_celltype=CL:0000988!1.41e-07!32;CL:0002032!1.41e-07!32;CL:0000037!1.41e-07!32;CL:0000566!1.41e-07!32;CL:0000837!1.41e-07!32;CL:0000542!4.64e-07!13;CL:0000051!4.64e-07!13;CL:0002031!7.96e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.86e-46,6;CL:0000556,1.86e-46,6;CL:0000050,2.72e-31,9;CL:0000839,6.21e-22,13;CL:0000945,5.15e-19,1;CL:0000236,5.15e-19,1;CL:0000826,5.15e-19,1;CL:0002031,5.10e-18,25;CL:0000763,5.66e-18,16;CL:0000049,2.95e-15,19;CL:0000988,3.12e-14,32;CL:0002032,3.12e-14,32;CL:0000037,3.12e-14,32;CL:0000837,3.12e-14,32;CL:0002320,4.29e-10,46;CL:0000134,4.29e-10,46;CL:0000219,1.10e-08,54;CL:0002027,5.46e-07,3;CL:0002006,5.46e-07,3;CL:0002024,5.46e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.66e-18,16;UBERON:0001474,2.82e-13,22;UBERON:0004765,2.82e-13,22;UBERON:0001434,2.82e-13,22;UBERON:0002384,4.29e-10,46;UBERON:0002204,2.45e-09,32;UBERON:0002390,8.30e-07,45;UBERON:0003061,8.30e-07,45 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.516493293766305,0.140788722151667,0,0,0,0.684802919724823,0.174840804837995,0.333109761815663,1.21485160433896,0,4.25873923233621,4.66189074259512,4.2438965179803,0,0.0992909512008853,0,0.319984845586813,0.22940928106717,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0.7813353445238,0.523523743973798,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,7.21465206048266,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0.899899717281399,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,0.292780797011547,0,0,0.239630249011841,0,0.381210681219194,0,0,0,0,0,0,0,0,0.622034853050465,0.252722758433675,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,0.210289948564127,0,0,0,0.426576501070468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.210407459670956,0.126473074248515,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0.390438744296638,0,0.477937595905104,0,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0.376736914009382,0.410082683163076,0.457556346413045,0.339956859987711,0.279902904647316,0.414599921413271,0,0,0,0,0.209088296014469,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0.234714477291508,0,0.104859344425711,0,0,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0.516493293766305,0.140788722151667,0,0,0,0.684802919724823,0.174840804837995,0.333109761815663,1.21485160433896,0,4.25873923233621,4.66189074259512,4.2438965179803,0,0.0992909512008853,0,0.319984845586813,0.22940928106717,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0.7813353445238,0.523523743973798,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,7.21465206048266,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0.899899717281399,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,0.292780797011547,0,0,0.239630249011841,0,0.381210681219194,0,0,0,0,0,0,0,0,0.622034853050465,0.252722758433675,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,0.210289948564127,0,0,0,0.426576501070468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.210407459670956,0.126473074248515,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0.390438744296638,0,0.477937595905104,0,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0.376736914009382,0.410082683163076,0.457556346413045,0.339956859987711,0.279902904647316,0.414599921413271,0,0,0,0,0.209088296014469,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0.234714477291508,0,0.104859344425711,0,0,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p3@ENSMUST00000128198,p3@uc007rwb.1 | |short_description=p3@ENSMUST00000128198,p3@uc007rwb.1 | ||
}} | }} |
Latest revision as of 14:39, 5 August 2015
Short description: | p3@ENSMUST00000128198, p3@uc007rwb.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ENSMUST00000128198_5end, CAGE_peak_3_at_uc007rwb.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:48 |
Association with transcript: | 68bp_to_ENSMUST00000128198, uc007rwb.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.86e-46 | 6 |
megakaryocyte | 1.86e-46 | 6 |
megakaryocyte-erythroid progenitor cell | 2.72e-31 | 9 |
myeloid lineage restricted progenitor cell | 6.21e-22 | 13 |
lymphocyte of B lineage | 5.15e-19 | 1 |
B cell | 5.15e-19 | 1 |
pro-B cell | 5.15e-19 | 1 |
hematopoietic lineage restricted progenitor cell | 5.10e-18 | 25 |
myeloid cell | 5.66e-18 | 16 |
common myeloid progenitor | 2.95e-15 | 19 |
hematopoietic cell | 3.12e-14 | 32 |
hematopoietic oligopotent progenitor cell | 3.12e-14 | 32 |
hematopoietic stem cell | 3.12e-14 | 32 |
hematopoietic multipotent progenitor cell | 3.12e-14 | 32 |
connective tissue cell | 4.29e-10 | 46 |
mesenchymal cell | 4.29e-10 | 46 |
motile cell | 1.10e-08 | 54 |
CD9-positive, CD41-positive megakaryocyte cell | 5.46e-07 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 5.46e-07 | 3 |
Kit-positive megakaryocyte progenitor cell | 5.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.66e-18 | 16 |
bone element | 2.82e-13 | 22 |
skeletal element | 2.82e-13 | 22 |
skeletal system | 2.82e-13 | 22 |
connective tissue | 4.29e-10 | 46 |
musculoskeletal system | 2.45e-09 | 32 |
hematopoietic system | 8.30e-07 | 45 |
blood island | 8.30e-07 | 45 |