FFCP PHASE1:Mm9::chr11:118352547..118352560,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |MCL_coexpression_id=2 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:118352547..118352560,- | |||
|description=CAGE_peak_at_chr11:118352547..118352560,- | |description=CAGE_peak_at_chr11:118352547..118352560,- | ||
|id=chr11:118352547..118352560,- | |id=chr11:118352547..118352560,- | ||
|ontology_enrichment_celltype=CL:0000117!1.18e-22!23;CL:0000337!1.18e-22!23;CL:0000540!3.49e-16!33;CL:0000047!3.49e-16!33;CL:0000031!3.49e-16!33;CL:0000404!3.49e-16!33;CL:0000393!1.87e-12!39;CL:0000211!1.87e-12!39;CL:0002319!2.48e-12!43;CL:0000221!7.28e-12!44;CL:0000133!7.28e-12!44;CL:0000055!1.77e-09!50 | |ontology_enrichment_celltype=CL:0000117!1.18e-22!23;CL:0000337!1.18e-22!23;CL:0000540!3.49e-16!33;CL:0000047!3.49e-16!33;CL:0000031!3.49e-16!33;CL:0000404!3.49e-16!33;CL:0000393!1.87e-12!39;CL:0000211!1.87e-12!39;CL:0002319!2.48e-12!43;CL:0000221!7.28e-12!44;CL:0000133!7.28e-12!44;CL:0000055!1.77e-09!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.87e-15,23;CL:0000337,3.87e-15,23;CL:0000540,7.49e-10,33;CL:0000047,7.49e-10,33;CL:0000031,7.49e-10,33;CL:0000404,7.49e-10,33;CL:0002612,3.52e-09,3;CL:0002610,1.35e-08,3;CL:0000393,5.47e-08,39;CL:0000211,5.47e-08,39;CL:0002319,4.87e-07,43;CL:0000221,7.90e-07,44;CL:0000133,7.90e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.34e-33!75;UBERON:0001016!2.34e-33!75;UBERON:0001049!1.13e-32!52;UBERON:0005068!1.13e-32!52;UBERON:0006241!1.13e-32!52;UBERON:0007135!1.13e-32!52;UBERON:0001017!3.15e-32!73;UBERON:0005743!3.15e-32!73;UBERON:0002020!8.67e-32!34;UBERON:0000955!2.29e-30!50;UBERON:0006238!2.29e-30!50;UBERON:0002616!3.45e-29!49;UBERON:0002346!1.92e-27!71;UBERON:0003075!1.92e-27!71;UBERON:0007284!1.92e-27!71;UBERON:0000033!1.91e-26!63;UBERON:0002791!4.68e-26!29;UBERON:0003528!4.68e-26!29;UBERON:0001893!4.68e-26!29;UBERON:0004121!3.41e-25!102;UBERON:0000924!3.41e-25!102;UBERON:0006601!3.41e-25!102;UBERON:0003080!5.86e-24!40;UBERON:0002780!7.25e-23!39;UBERON:0001890!7.25e-23!39;UBERON:0006240!7.25e-23!39;UBERON:0003056!8.65e-23!49;UBERON:0000956!8.00e-19!21;UBERON:0001869!8.00e-19!21;UBERON:0000203!8.00e-19!21;UBERON:0007811!3.25e-17!86;UBERON:0000153!2.20e-15!94;UBERON:0002619!6.79e-15!17;UBERON:0002021!2.45e-13!10;UBERON:0000411!2.45e-13!10;UBERON:0001950!2.45e-13!10;UBERON:0003076!5.95e-09!12;UBERON:0003057!5.95e-09!12;UBERON:0000025!8.79e-09!114;UBERON:0002420!2.79e-08!8;UBERON:0007245!2.79e-08!8;UBERON:0010009!2.79e-08!8;UBERON:0010011!2.79e-08!8;UBERON:0000454!2.79e-08!8;UBERON:0004111!5.49e-08!122;UBERON:0002240!9.34e-08!6;UBERON:0005174!9.34e-08!6;UBERON:0001137!9.34e-08!6;UBERON:0001948!7.92e-07!5;UBERON:0002315!7.92e-07!5 | |ontology_enrichment_uberon=UBERON:0000073!2.34e-33!75;UBERON:0001016!2.34e-33!75;UBERON:0001049!1.13e-32!52;UBERON:0005068!1.13e-32!52;UBERON:0006241!1.13e-32!52;UBERON:0007135!1.13e-32!52;UBERON:0001017!3.15e-32!73;UBERON:0005743!3.15e-32!73;UBERON:0002020!8.67e-32!34;UBERON:0000955!2.29e-30!50;UBERON:0006238!2.29e-30!50;UBERON:0002616!3.45e-29!49;UBERON:0002346!1.92e-27!71;UBERON:0003075!1.92e-27!71;UBERON:0007284!1.92e-27!71;UBERON:0000033!1.91e-26!63;UBERON:0002791!4.68e-26!29;UBERON:0003528!4.68e-26!29;UBERON:0001893!4.68e-26!29;UBERON:0004121!3.41e-25!102;UBERON:0000924!3.41e-25!102;UBERON:0006601!3.41e-25!102;UBERON:0003080!5.86e-24!40;UBERON:0002780!7.25e-23!39;UBERON:0001890!7.25e-23!39;UBERON:0006240!7.25e-23!39;UBERON:0003056!8.65e-23!49;UBERON:0000956!8.00e-19!21;UBERON:0001869!8.00e-19!21;UBERON:0000203!8.00e-19!21;UBERON:0007811!3.25e-17!86;UBERON:0000153!2.20e-15!94;UBERON:0002619!6.79e-15!17;UBERON:0002021!2.45e-13!10;UBERON:0000411!2.45e-13!10;UBERON:0001950!2.45e-13!10;UBERON:0003076!5.95e-09!12;UBERON:0003057!5.95e-09!12;UBERON:0000025!8.79e-09!114;UBERON:0002420!2.79e-08!8;UBERON:0007245!2.79e-08!8;UBERON:0010009!2.79e-08!8;UBERON:0010011!2.79e-08!8;UBERON:0000454!2.79e-08!8;UBERON:0004111!5.49e-08!122;UBERON:0002240!9.34e-08!6;UBERON:0005174!9.34e-08!6;UBERON:0001137!9.34e-08!6;UBERON:0001948!7.92e-07!5;UBERON:0002315!7.92e-07!5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.01e-35,54;UBERON:0002020,2.01e-31,34;UBERON:0001017,3.84e-31,73;UBERON:0001049,5.01e-31,52;UBERON:0005068,5.01e-31,52;UBERON:0006241,5.01e-31,52;UBERON:0007135,5.01e-31,52;UBERON:0001016,3.61e-30,75;UBERON:0002021,8.27e-25,10;UBERON:0000411,8.27e-25,10;UBERON:0001950,8.27e-25,10;UBERON:0002346,2.89e-24,64;UBERON:0003075,2.89e-24,64;UBERON:0007284,2.89e-24,64;UBERON:0004121,1.11e-22,95;UBERON:0000924,1.11e-22,95;UBERON:0006601,1.11e-22,95;UBERON:0000955,1.13e-21,47;UBERON:0006238,1.13e-21,47;UBERON:0003528,1.00e-20,29;UBERON:0002791,1.00e-20,29;UBERON:0001893,1.00e-20,29;UBERON:0010371,1.19e-20,73;UBERON:0002619,1.65e-20,17;UBERON:0002616,7.83e-20,46;UBERON:0000956,2.45e-19,21;UBERON:0001869,2.45e-19,21;UBERON:0000203,2.45e-19,21;UBERON:0003080,2.38e-18,40;UBERON:0002780,1.33e-16,39;UBERON:0001890,1.33e-16,39;UBERON:0006240,1.33e-16,39;UBERON:0002240,2.13e-16,6;UBERON:0005174,2.13e-16,6;UBERON:0001137,2.13e-16,6;UBERON:0010314,2.49e-15,92;UBERON:0003056,2.68e-14,49;UBERON:0001948,3.47e-14,5;UBERON:0002315,3.47e-14,5;UBERON:0003076,4.11e-14,12;UBERON:0003057,4.11e-14,12;UBERON:0000025,2.22e-11,114;UBERON:0004111,2.70e-10,122;UBERON:0002257,3.52e-09,3;UBERON:0004684,1.35e-08,3;UBERON:0002275,1.35e-08,3;UBERON:0011216,3.07e-08,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0.829516898467821,0.945041568321835,0.630974884054146,2.28520787523043,1.54607978666129,0.367472397644862,0.287536413054709,4.5960939330501,1.10115880999389,1.14918604276669,1.84327839907492,0.131886287730194,0.731901148819277,1.56274011167028,1.11673199600552,0.56276261003168,0.45839474333043,2.06240009831567,2.56269025438385,1.4911955666024,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,2.34224637609238,2.72280718857492,0,0,0,0,2.09706895166752,1.83000241127451,0.628271760564322,2.78118912307642,5.37002460393694,0.41557608911912,1.1356888414743,0,0,0.252722758433675,0,0,0,0,0.452114453507145,0.136072998302656,0,0.0937017245597288,0.517406741478031,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.514523061896422,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0.58489226135736,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,2.57057053137446,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,6.21227026878773,6.90487854760765,14.3223878359849,10.998603669996,0.685082519770642,9.82012066606611,6.75022500231806,4.95353323546643,5.43770890781046,2.07104124700728,0.103787347584177,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0.476872379894642,0.145346416632329,0.188218760830661,0.25384382367503,0.182927972872773,0.263069711437843,0,0,0,0.0985044823755635,0.409231043169689,0,0,0.749431733813838,0.233931608445408,0,0,0.220591419119515,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0.829516898467821,0.945041568321835,0.630974884054146,2.28520787523043,1.54607978666129,0.367472397644862,0.287536413054709,4.5960939330501,1.10115880999389,1.14918604276669,1.84327839907492,0.131886287730194,0.731901148819277,1.56274011167028,1.11673199600552,0.56276261003168,0.45839474333043,2.06240009831567,2.56269025438385,1.4911955666024,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,2.34224637609238,2.72280718857492,0,0,0,0,2.09706895166752,1.83000241127451,0.628271760564322,2.78118912307642,5.37002460393694,0.41557608911912,1.1356888414743,0,0,0.252722758433675,0,0,0,0,0.452114453507145,0.136072998302656,0,0.0937017245597288,0.517406741478031,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.514523061896422,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0.58489226135736,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,2.57057053137446,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11255181206306,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0.104859344425711,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,6.21227026878773,6.90487854760765,14.3223878359849,10.998603669996,0.685082519770642,9.82012066606611,6.75022500231806,4.95353323546643,5.43770890781046,2.07104124700728,0.103787347584177,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0.476872379894642,0.145346416632329,0.188218760830661,0.25384382367503,0.182927972872773,0.263069711437843,0,0,0,0.0985044823755635,0.409231043169689,0,0,0.749431733813838,0.233931608445408,0,0,0.220591419119515,0.231867835620421 | ||
|short_description=p@chr11:118352547..118352560,- | |short_description=p@chr11:118352547..118352560,- | ||
}} | }} |
Latest revision as of 13:57, 5 August 2015
Short description: | p@chr11:118352547..118352560, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:118352547..118352560, - |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.87e-15 | 23 |
neuroblast (sensu Vertebrata) | 3.87e-15 | 23 |
neuron | 7.49e-10 | 33 |
neuronal stem cell | 7.49e-10 | 33 |
neuroblast | 7.49e-10 | 33 |
electrically signaling cell | 7.49e-10 | 33 |
neuron of the ventral spinal cord | 3.52e-09 | 3 |
raphe nuclei neuron | 1.35e-08 | 3 |
electrically responsive cell | 5.47e-08 | 39 |
electrically active cell | 5.47e-08 | 39 |
neural cell | 4.87e-07 | 43 |
ectodermal cell | 7.90e-07 | 44 |
neurectodermal cell | 7.90e-07 | 44 |