FFCP PHASE1:Mm9::chr18:20714918..20714920,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1300|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:20714918..20714920,+|id=chr18:20714918..20714920,+|ontology_enrichment_celltype=CL:0000239!8.71e-29!6;CL:0000677!8.71e-29!6;CL:0000212!8.71e-29!6;CL:0000584!8.71e-29!6;CL:0000075!1.08e-24!7;CL:0000066!1.25e-21!25;CL:0000473!1.78e-21!3;CL:0000627!1.78e-21!3;CL:0000682!1.78e-21!3;CL:0002563!3.14e-19!9;CL:0002251!3.14e-19!9;CL:0000223!3.22e-12!20;CL:0002076!1.51e-11!15;CL:0000115!2.98e-08!1;CL:0000213!2.98e-08!1;CL:0002078!2.98e-08!1;CL:0002262!2.98e-08!1;CL:1000398!2.98e-08!1;CL:0000063!1.19e-07!66|ontology_enrichment_celltype_v019_2=CL:0000682,2.80e-33,3;CL:0000239,1.45e-29,6;CL:0000677,1.45e-29,6;CL:0000584,1.45e-29,6;CL:0000066,6.66e-28,25;CL:0000075,1.97e-25,7;CL:0002563,6.57e-20,9;CL:0002251,6.57e-20,9;CL:0000473,9.96e-15,7;CL:0000223,6.18e-14,20;CL:0000213,3.34e-12,1;CL:0002078,3.34e-12,1;CL:0000115,3.34e-12,1;CL:0002262,3.34e-12,1;CL:1000398,3.34e-12,1;CL:0002076,3.83e-12,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!8.77e-22!15;UBERON:0003350!3.14e-19!9;UBERON:0004808!3.14e-19!9;UBERON:0001277!3.14e-19!9;UBERON:0001242!9.84e-19!13;UBERON:0000060!9.84e-19!13;UBERON:0001262!9.84e-19!13;UBERON:0004786!9.84e-19!13;UBERON:0000485!9.62e-16!11;UBERON:0004923!1.86e-13!24;UBERON:0000353!2.98e-08!1;UBERON:0003497!2.98e-08!1;UBERON:0003909!2.98e-08!1;UBERON:0003835!2.98e-08!1;UBERON:0003513!2.98e-08!1;UBERON:0001281!2.98e-08!1;UBERON:0001280!2.98e-08!1;UBERON:0004647!2.98e-08!1;UBERON:0003199!6.57e-08!1;UBERON:0003929!3.18e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0003350,6.57e-20,9;UBERON:0004808,6.57e-20,9;UBERON:0001277,6.57e-20,9;UBERON:0000485,2.19e-16,11;UBERON:0001242,6.11e-14,13;UBERON:0001262,6.11e-14,13;UBERON:0004786,6.11e-14,13;UBERON:0002394,3.34e-12,1;UBERON:0001281,3.34e-12,1;UBERON:0000353,3.34e-12,1;UBERON:0003497,3.34e-12,1;UBERON:0003909,3.34e-12,1;UBERON:0003928,3.34e-12,1;UBERON:0003835,3.34e-12,1;UBERON:0003513,3.34e-12,1;UBERON:0001280,3.34e-12,1;UBERON:0004647,3.34e-12,1;UBERON:0002294,3.34e-12,1;UBERON:0001173,3.34e-12,1;UBERON:0004912,3.34e-12,1;UBERON:0005171,3.34e-12,1;UBERON:0000344,3.83e-12,15;UBERON:0004923,9.80e-08,24|phase1_expression=0,1.04692622291808,3.63999391511629,0.90739263392049,0,2.85394762250213,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,2.29692785646008,2.15380998079537,1.29282739611533,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02905142091174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0.192423683280659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr18:20714918..20714920,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1300 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:20714918..20714920,+ | |||
|description=CAGE_peak_at_chr18:20714918..20714920,+ | |||
|id=chr18:20714918..20714920,+ | |||
|ontology_enrichment_celltype=CL:0000239!8.71e-29!6;CL:0000677!8.71e-29!6;CL:0000212!8.71e-29!6;CL:0000584!8.71e-29!6;CL:0000075!1.08e-24!7;CL:0000066!1.25e-21!25;CL:0000473!1.78e-21!3;CL:0000627!1.78e-21!3;CL:0000682!1.78e-21!3;CL:0002563!3.14e-19!9;CL:0002251!3.14e-19!9;CL:0000223!3.22e-12!20;CL:0002076!1.51e-11!15;CL:0000115!2.98e-08!1;CL:0000213!2.98e-08!1;CL:0002078!2.98e-08!1;CL:0002262!2.98e-08!1;CL:1000398!2.98e-08!1;CL:0000063!1.19e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.80e-33,3;CL:0000239,1.45e-29,6;CL:0000677,1.45e-29,6;CL:0000584,1.45e-29,6;CL:0000066,6.66e-28,25;CL:0000075,1.97e-25,7;CL:0002563,6.57e-20,9;CL:0002251,6.57e-20,9;CL:0000473,9.96e-15,7;CL:0000223,6.18e-14,20;CL:0000213,3.34e-12,1;CL:0002078,3.34e-12,1;CL:0000115,3.34e-12,1;CL:0002262,3.34e-12,1;CL:1000398,3.34e-12,1;CL:0002076,3.83e-12,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!8.77e-22!15;UBERON:0003350!3.14e-19!9;UBERON:0004808!3.14e-19!9;UBERON:0001277!3.14e-19!9;UBERON:0001242!9.84e-19!13;UBERON:0000060!9.84e-19!13;UBERON:0001262!9.84e-19!13;UBERON:0004786!9.84e-19!13;UBERON:0000485!9.62e-16!11;UBERON:0004923!1.86e-13!24;UBERON:0000353!2.98e-08!1;UBERON:0003497!2.98e-08!1;UBERON:0003909!2.98e-08!1;UBERON:0003835!2.98e-08!1;UBERON:0003513!2.98e-08!1;UBERON:0001281!2.98e-08!1;UBERON:0001280!2.98e-08!1;UBERON:0004647!2.98e-08!1;UBERON:0003199!6.57e-08!1;UBERON:0003929!3.18e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,6.57e-20,9;UBERON:0004808,6.57e-20,9;UBERON:0001277,6.57e-20,9;UBERON:0000485,2.19e-16,11;UBERON:0001242,6.11e-14,13;UBERON:0001262,6.11e-14,13;UBERON:0004786,6.11e-14,13;UBERON:0002394,3.34e-12,1;UBERON:0001281,3.34e-12,1;UBERON:0000353,3.34e-12,1;UBERON:0003497,3.34e-12,1;UBERON:0003909,3.34e-12,1;UBERON:0003928,3.34e-12,1;UBERON:0003835,3.34e-12,1;UBERON:0003513,3.34e-12,1;UBERON:0001280,3.34e-12,1;UBERON:0004647,3.34e-12,1;UBERON:0002294,3.34e-12,1;UBERON:0001173,3.34e-12,1;UBERON:0004912,3.34e-12,1;UBERON:0005171,3.34e-12,1;UBERON:0000344,3.83e-12,15;UBERON:0004923,9.80e-08,24 | |||
|phase1_expression=0,1.04692622291808,3.63999391511629,0.90739263392049,0,2.85394762250213,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,2.29692785646008,2.15380998079537,1.29282739611533,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02905142091174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0.192423683280659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:20714918..20714920,+ | |||
}} |
Latest revision as of 13:48, 5 August 2015
Short description: | p@chr18:20714918..20714920, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:20714918..20714920, + |
Coexpression cluster: | MCL_coexpression_mm9:1300 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.80e-33 | 3 |
brush border epithelial cell | 1.45e-29 | 6 |
gut absorptive cell | 1.45e-29 | 6 |
enterocyte | 1.45e-29 | 6 |
epithelial cell | 6.66e-28 | 25 |
columnar/cuboidal epithelial cell | 1.97e-25 | 7 |
intestinal epithelial cell | 6.57e-20 | 9 |
epithelial cell of alimentary canal | 6.57e-20 | 9 |
defensive cell | 9.96e-15 | 7 |
endodermal cell | 6.18e-14 | 20 |
lining cell | 3.34e-12 | 1 |
meso-epithelial cell | 3.34e-12 | 1 |
endothelial cell | 3.34e-12 | 1 |
endothelial cell of sinusoid | 3.34e-12 | 1 |
endothelial cell of hepatic sinusoid | 3.34e-12 | 1 |
endo-epithelial cell | 3.83e-12 | 15 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 6.57e-20 | 9 |
gastrointestinal system epithelium | 6.57e-20 | 9 |
intestinal epithelium | 6.57e-20 | 9 |
simple columnar epithelium | 2.19e-16 | 11 |
intestinal mucosa | 6.11e-14 | 13 |
wall of intestine | 6.11e-14 | 13 |
gastrointestinal system mucosa | 6.11e-14 | 13 |
bile duct | 3.34e-12 | 1 |
hepatic sinusoid | 3.34e-12 | 1 |
parenchyma | 3.34e-12 | 1 |
abdomen blood vessel | 3.34e-12 | 1 |
sinusoid | 3.34e-12 | 1 |
digestive system duct | 3.34e-12 | 1 |
abdominal segment blood vessel | 3.34e-12 | 1 |
trunk blood vessel | 3.34e-12 | 1 |
liver parenchyma | 3.34e-12 | 1 |
liver lobule | 3.34e-12 | 1 |
biliary system | 3.34e-12 | 1 |
biliary tree | 3.34e-12 | 1 |
biliary bud | 3.34e-12 | 1 |
hepatic duct | 3.34e-12 | 1 |
mucosa | 3.83e-12 | 15 |
organ component layer | 9.80e-08 | 24 |