FFCP PHASE1:Mm9::chr11:118164365..118164387,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=98 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:118164365..118164387,- | |||
|description=CAGE_peak_at_chr11:118164365..118164387,- | |description=CAGE_peak_at_chr11:118164365..118164387,- | ||
|id=chr11:118164365..118164387,- | |id=chr11:118164365..118164387,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.96e-19,3;CL:0000359,1.96e-19,3;CL:0002539,1.96e-19,3;CL:0000514,1.96e-19,3;CL:0002453,4.13e-12,8;CL:0000680,5.34e-10,6;CL:0000187,5.34e-10,6;CL:0000056,5.34e-10,6;CL:0000333,9.84e-10,10;CL:0000095,9.84e-10,10;CL:0000243,9.84e-10,10;CL:0000123,9.84e-10,10;CL:0000125,9.84e-10,10;CL:0000030,9.84e-10,10;CL:0000339,9.84e-10,10;CL:0000128,2.35e-09,6;CL:0000126,2.35e-09,6;CL:0000127,2.35e-09,6;CL:0002092,9.29e-09,3;CL:0002540,9.29e-09,3;CL:0000222,1.22e-08,7;CL:0000355,8.05e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000947,6.30e-25,4;UBERON:0001637,6.30e-25,4;UBERON:0004573,6.30e-25,4;UBERON:0003509,6.30e-25,4;UBERON:0004571,6.30e-25,4;UBERON:0010191,6.30e-25,4;UBERON:0004572,6.30e-25,4;UBERON:0000055,5.21e-20,5;UBERON:0007500,5.21e-20,5;UBERON:0001981,5.21e-20,5;UBERON:0002049,5.21e-20,5;UBERON:0007798,5.21e-20,5;UBERON:0004537,5.21e-20,5;UBERON:0006965,5.21e-20,5;UBERON:0001135,1.96e-19,3;UBERON:0004237,1.96e-19,3;UBERON:0004695,1.96e-19,3;UBERON:0002111,1.96e-19,3;UBERON:0004178,1.96e-19,3;UBERON:0000993,3.20e-07,1;UBERON:0001134,8.05e-07,9;UBERON:0002036,8.05e-07,9;UBERON:0002385,8.05e-07,9;UBERON:0000486,8.05e-07,9;UBERON:0007503,8.05e-07,9;UBERON:0001015,8.05e-07,9;UBERON:0002329,8.05e-07,9;UBERON:0003082,8.05e-07,9;UBERON:0003059,8.05e-07,9;UBERON:0007282,8.05e-07,9;UBERON:0004290,8.05e-07,9;UBERON:0009618,8.05e-07,9 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,6.04304726282771,6.69087746048796,3.12029478674859,0.782391344348039,0.218025156380447,0.439372365468944,1.36100929351998,1.81982348112971,1.43752564364972,0,0,0,0.771778308107841,0.286533439938757,0.515672092277442,0,0,0,0.677689064138264,0.889294796111139,1.7997994345628,0,1.4209602298922,2.99600110518405,0.768436610643109,0,0.135005938331691,0,0.285650984403804,0,0,0,0,0,0.510749352340751,0.307213066512487,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0.186399445825301,0,0.151143120213571,0,0,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.23517741427141,0,0.494389935468748,1.59059292611903,0,0.323533699894818,0.220841518460394,0,0,0,0.41889341362691,0.255457055208591,0.11981512450592,0,0,0.149790639404823,0,0.125654352112864,0.347648640384553,0.255715457330331,0,0.162241263067758,0.305518091550949,0.622034853050465,0,0,0,0,0,0,0.136072998302656,0.12811372028485,0.0937017245597288,0,0,0,0,0.43839146485515,0.556094498451196,0,0,0,0,0,0,0,0,0.180062061461015,0,0.393528463494808,0,0,0.268273401399619,0,0.329119699826961,0.164167464079095,0.56748166682099,0,0,0,0.210289948564127,0.205809224758569,0,0,0.426576501070468,0,0,0,0,0,0.949058123089023,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0.432276099749388,0.199141273254367,0.569003702859245,0.114248512609729,0,0,0,0,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0.482443521363367,0.369506380333209,0,0,0,0,0.167506257441816,0,0.195133647857799,0.472905432318573,0.44292937929755,0.159454768657487,0.327726629431476,0.518054945597687,0.578596234326046,0,0,0,0,0.160550589987792,0.117211686592203,0.327869890753351,0.252470927204373,0,0,0,0.477937595905104,0.668396022247182,0.566153061577665,0.404810701674894,0.584511715822624,1.18586333383957,0,0.283880170416537,0.35613120733451,0.651547837414304,1.64970122972535,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0.712994756769443,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0.608929898229199,0,0.42366414172764,0.220528398054962,0.65954501176592,1.13025098687134,0.180938774784468,0.119372344003136,0.164140899745061,0.582961673259701,0.927126510052548,0.341741761595705,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0.578574190077352,0,0,0,0,0.598066184175915,0,0,0.129159823477731,0.168956125490778,0.234714477291508,0.13020438484395,0.314578033277133,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0.295379054349154,0.100966449948148,0.0762068066549998,0,0,0,0.116876902181569,0.453460767230423,0,0,0,0.965947970160952,0.375364950902364,0.183151624267265,0.428736758158132,0,0,0,0.572895513439397,0.68741272937475,0.685082519770642,0,0,0.45032120322422,0,0.51776031175182,0,0,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0.187283014939765,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0,0.409231043169689,0,0,0.249810577937946,0.233931608445408,0.214871054048298,2.10417165275728,1.10295709559758,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,6.04304726282771,6.69087746048796,3.12029478674859,0.782391344348039,0.218025156380447,0.439372365468944,1.36100929351998,1.81982348112971,1.43752564364972,0,0,0,0.771778308107841,0.286533439938757,0.515672092277442,0,0,0,0.677689064138264,0.889294796111139,1.7997994345628,0,1.4209602298922,2.99600110518405,0.768436610643109,0,0.135005938331691,0,0.285650984403804,0,0,0,0,0,0.510749352340751,0.307213066512487,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0.186399445825301,0,0.151143120213571,0,0,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.23517741427141,0,0.494389935468748,1.59059292611903,0,0.323533699894818,0.220841518460394,0,0,0,0.41889341362691,0.255457055208591,0.11981512450592,0,0,0.149790639404823,0,0.125654352112864,0.347648640384553,0.255715457330331,0,0.162241263067758,0.305518091550949,0.622034853050465,0,0,0,0,0,0,0.136072998302656,0.12811372028485,0.0937017245597288,0,0,0,0,0.43839146485515,0.556094498451196,0,0,0,0,0,0,0,0,0.180062061461015,0,0.393528463494808,0,0,0.268273401399619,0,0.329119699826961,0.164167464079095,0.56748166682099,0,0,0,0.210289948564127,0.205809224758569,0,0,0.426576501070468,0,0,0,0,0,0.949058123089023,0.164698954724011,0,0.397912944082302,0.19496408711912,0,0.432276099749388,0.199141273254367,0.569003702859245,0.114248512609729,0,0,0,0,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0.482443521363367,0.369506380333209,0,0,0,0,0.167506257441816,0,0.195133647857799,0.472905432318573,0.44292937929755,0.159454768657487,0.327726629431476,0.518054945597687,0.578596234326046,0,0,0,0,0.160550589987792,0.117211686592203,0.327869890753351,0.252470927204373,0,0,0,0.477937595905104,0.668396022247182,0.566153061577665,0.404810701674894,0.584511715822624,1.18586333383957,0,0.283880170416537,0.35613120733451,0.651547837414304,1.64970122972535,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0.712994756769443,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0.608929898229199,0,0.42366414172764,0.220528398054962,0.65954501176592,1.13025098687134,0.180938774784468,0.119372344003136,0.164140899745061,0.582961673259701,0.927126510052548,0.341741761595705,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0.578574190077352,0,0,0,0,0.598066184175915,0,0,0.129159823477731,0.168956125490778,0.234714477291508,0.13020438484395,0.314578033277133,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0.295379054349154,0.100966449948148,0.0762068066549998,0,0,0,0.116876902181569,0.453460767230423,0,0,0,0.965947970160952,0.375364950902364,0.183151624267265,0.428736758158132,0,0,0,0.572895513439397,0.68741272937475,0.685082519770642,0,0,0.45032120322422,0,0.51776031175182,0,0,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0.187283014939765,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0,0.409231043169689,0,0,0.249810577937946,0.233931608445408,0.214871054048298,2.10417165275728,1.10295709559758,0 | ||
|short_description=p@chr11:118164365..118164387,- | |short_description=p@chr11:118164365..118164387,- | ||
}} | }} |
Latest revision as of 13:32, 5 August 2015
Short description: | p@chr11:118164365..118164387, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:118164365..118164387, - |
Coexpression cluster: | MCL_coexpression_mm9:98 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.96e-19 | 3 |
vascular associated smooth muscle cell | 1.96e-19 | 3 |
aortic smooth muscle cell | 1.96e-19 | 3 |
smooth muscle myoblast | 1.96e-19 | 3 |
oligodendrocyte precursor cell | 4.13e-12 | 8 |
muscle precursor cell | 5.34e-10 | 6 |
muscle cell | 5.34e-10 | 6 |
myoblast | 5.34e-10 | 6 |
migratory neural crest cell | 9.84e-10 | 10 |
neuron associated cell | 9.84e-10 | 10 |
glial cell (sensu Vertebrata) | 9.84e-10 | 10 |
neuron associated cell (sensu Vertebrata) | 9.84e-10 | 10 |
glial cell | 9.84e-10 | 10 |
glioblast | 9.84e-10 | 10 |
glioblast (sensu Vertebrata) | 9.84e-10 | 10 |
oligodendrocyte | 2.35e-09 | 6 |
macroglial cell | 2.35e-09 | 6 |
astrocyte | 2.35e-09 | 6 |
bone marrow cell | 9.29e-09 | 3 |
mesenchymal stem cell of the bone marrow | 9.29e-09 | 3 |
mesodermal cell | 1.22e-08 | 7 |
multi-potent skeletal muscle stem cell | 8.05e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
aorta | 6.30e-25 | 4 |
artery | 6.30e-25 | 4 |
systemic artery | 6.30e-25 | 4 |
arterial blood vessel | 6.30e-25 | 4 |
systemic arterial system | 6.30e-25 | 4 |
aortic system | 6.30e-25 | 4 |
arterial system | 6.30e-25 | 4 |
vessel | 5.21e-20 | 5 |
epithelial tube open at both ends | 5.21e-20 | 5 |
blood vessel | 5.21e-20 | 5 |
vasculature | 5.21e-20 | 5 |
vascular system | 5.21e-20 | 5 |
blood vasculature | 5.21e-20 | 5 |
vascular cord | 5.21e-20 | 5 |
smooth muscle tissue | 1.96e-19 | 3 |
blood vessel smooth muscle | 1.96e-19 | 3 |
arterial system smooth muscle | 1.96e-19 | 3 |
artery smooth muscle tissue | 1.96e-19 | 3 |
aorta smooth muscle tissue | 1.96e-19 | 3 |
oviduct | 3.20e-07 | 1 |
skeletal muscle tissue | 8.05e-07 | 9 |
striated muscle tissue | 8.05e-07 | 9 |
muscle tissue | 8.05e-07 | 9 |
multilaminar epithelium | 8.05e-07 | 9 |
epithelial vesicle | 8.05e-07 | 9 |
musculature | 8.05e-07 | 9 |
somite | 8.05e-07 | 9 |
myotome | 8.05e-07 | 9 |
presomitic mesoderm | 8.05e-07 | 9 |
presumptive segmental plate | 8.05e-07 | 9 |
dermomyotome | 8.05e-07 | 9 |
trunk paraxial mesoderm | 8.05e-07 | 9 |