FFCP PHASE1:Mm9::chr11:116674535..116674552,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=16 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:116674535..116674552,+ | |||
|description=CAGE_peak_at_chr11:116674535..116674552,+ | |description=CAGE_peak_at_chr11:116674535..116674552,+ | ||
|id=chr11:116674535..116674552,+ | |id=chr11:116674535..116674552,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000120,2.75e-10,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!2.54e-13!9;UBERON:0000019!2.54e-13!9;UBERON:0000047!2.54e-13!9;UBERON:0004088!2.54e-13!9;UBERON:0002104!2.54e-13!9;UBERON:0001456!2.54e-13!9;UBERON:0003072!2.54e-13!9;UBERON:0003071!2.54e-13!9;UBERON:0004128!2.54e-13!9;UBERON:0001444!1.43e-10!11;UBERON:0000020!1.53e-09!12;UBERON:0001032!1.53e-09!12;UBERON:0004456!1.53e-09!12;UBERON:0005085!1.13e-08!13;UBERON:0002370!2.39e-08!23;UBERON:0000974!2.39e-08!23;UBERON:0004807!2.39e-08!23;UBERON:0005058!2.39e-08!23;UBERON:0003351!2.39e-08!23;UBERON:0009113!2.39e-08!23;UBERON:0003295!2.39e-08!23;UBERON:0009722!2.39e-08!23;UBERON:0005562!2.39e-08!23;UBERON:0007690!2.39e-08!23;UBERON:0006562!6.91e-08!24;UBERON:0003408!6.91e-08!24;UBERON:0001557!6.91e-08!24;UBERON:0001042!6.91e-08!24;UBERON:0008814!6.91e-08!24;UBERON:0009145!6.91e-08!24 | |ontology_enrichment_uberon=UBERON:0000970!2.54e-13!9;UBERON:0000019!2.54e-13!9;UBERON:0000047!2.54e-13!9;UBERON:0004088!2.54e-13!9;UBERON:0002104!2.54e-13!9;UBERON:0001456!2.54e-13!9;UBERON:0003072!2.54e-13!9;UBERON:0003071!2.54e-13!9;UBERON:0004128!2.54e-13!9;UBERON:0001444!1.43e-10!11;UBERON:0000020!1.53e-09!12;UBERON:0001032!1.53e-09!12;UBERON:0004456!1.53e-09!12;UBERON:0005085!1.13e-08!13;UBERON:0002370!2.39e-08!23;UBERON:0000974!2.39e-08!23;UBERON:0004807!2.39e-08!23;UBERON:0005058!2.39e-08!23;UBERON:0003351!2.39e-08!23;UBERON:0009113!2.39e-08!23;UBERON:0003295!2.39e-08!23;UBERON:0009722!2.39e-08!23;UBERON:0005562!2.39e-08!23;UBERON:0007690!2.39e-08!23;UBERON:0006562!6.91e-08!24;UBERON:0003408!6.91e-08!24;UBERON:0001557!6.91e-08!24;UBERON:0001042!6.91e-08!24;UBERON:0008814!6.91e-08!24;UBERON:0009145!6.91e-08!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,5.93e-21,9;UBERON:0000019,5.93e-21,9;UBERON:0000047,5.93e-21,9;UBERON:0010312,5.93e-21,9;UBERON:0004088,5.93e-21,9;UBERON:0002104,5.93e-21,9;UBERON:0001456,5.93e-21,9;UBERON:0003072,5.93e-21,9;UBERON:0004128,5.93e-21,9;UBERON:0003071,5.93e-21,9;UBERON:0001444,3.66e-17,11;UBERON:0007811,5.59e-16,36;UBERON:0000020,9.72e-16,12;UBERON:0001032,9.72e-16,12;UBERON:0004456,9.72e-16,12;UBERON:0000033,1.56e-14,13;UBERON:0005085,1.56e-14,13;UBERON:0000153,2.92e-13,43 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365950574409639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0,0.301445281105245,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0.622034853050465,3.28539585963777,10.5220927943237,0,0.459804208866946,0.180062129805349,1.20563854268572,0.748401490664606,4.61209393025459,3.74806898238915,31.8205146008989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0.238968797952552,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0,0,0,0,2.02725215290164,2.05421914329655,2.46849563657811,2.68540043501222,0.596044064343795,0.120195449519969,0.738447635872886,0.302899349844443,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365950574409639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0.304465478312141,0,0.301445281105245,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0.622034853050465,3.28539585963777,10.5220927943237,0,0.459804208866946,0.180062129805349,1.20563854268572,0.748401490664606,4.61209393025459,3.74806898238915,31.8205146008989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0.238968797952552,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0,0,0,0,2.02725215290164,2.05421914329655,2.46849563657811,2.68540043501222,0.596044064343795,0.120195449519969,0.738447635872886,0.302899349844443,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p@chr11:116674535..116674552,+ | |short_description=p@chr11:116674535..116674552,+ | ||
}} | }} |
Latest revision as of 12:29, 5 August 2015
Short description: | p@chr11:116674535..116674552, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:116674535..116674552, + |
Coexpression cluster: | MCL_coexpression_mm9:16 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granule cell | 2.75e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
eye | 5.93e-21 | 9 |
camera-type eye | 5.93e-21 | 9 |
simple eye | 5.93e-21 | 9 |
immature eye | 5.93e-21 | 9 |
ocular region | 5.93e-21 | 9 |
visual system | 5.93e-21 | 9 |
face | 5.93e-21 | 9 |
optic cup | 5.93e-21 | 9 |
optic vesicle | 5.93e-21 | 9 |
eye primordium | 5.93e-21 | 9 |
subdivision of head | 3.66e-17 | 11 |
craniocervical region | 5.59e-16 | 36 |
sense organ | 9.72e-16 | 12 |
sensory system | 9.72e-16 | 12 |
entire sense organ system | 9.72e-16 | 12 |
head | 1.56e-14 | 13 |
ectodermal placode | 1.56e-14 | 13 |
anterior region of body | 2.92e-13 | 43 |