FFCP PHASE1:Mm9::chr2:70053872..70053879,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=353 | |MCL_coexpression_id=353 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:70053872..70053879,+ | |||
|description=CAGE_peak_at_chr2:70053872..70053879,+ | |description=CAGE_peak_at_chr2:70053872..70053879,+ | ||
|id=chr2:70053872..70053879,+ | |id=chr2:70053872..70053879,+ | ||
|ontology_enrichment_celltype=CL:0002612!1.46e-09!3;CL:0002611!3.44e-07!2 | |ontology_enrichment_celltype=CL:0002612!1.46e-09!3;CL:0002611!3.44e-07!2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002611,4.75e-35,2;CL:0002612,2.28e-24,3;CL:0000117,9.24e-13,23;CL:0000337,9.24e-13,23;CL:0000540,4.29e-09,33;CL:0000047,4.29e-09,33;CL:0000031,4.29e-09,33;CL:0000404,4.29e-09,33;CL:0000393,8.71e-08,39;CL:0000211,8.71e-08,39;CL:0002319,4.09e-07,43;CL:0000221,5.77e-07,44;CL:0000133,5.77e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002240!5.63e-18!6;UBERON:0005174!5.63e-18!6;UBERON:0001137!5.63e-18!6;UBERON:0001948!4.04e-15!5;UBERON:0002315!4.04e-15!5;UBERON:0003076!1.28e-11!12;UBERON:0003057!1.28e-11!12;UBERON:0002257!1.46e-09!3;UBERON:0002256!3.44e-07!2 | |ontology_enrichment_uberon=UBERON:0002240!5.63e-18!6;UBERON:0005174!5.63e-18!6;UBERON:0001137!5.63e-18!6;UBERON:0001948!4.04e-15!5;UBERON:0002315!4.04e-15!5;UBERON:0003076!1.28e-11!12;UBERON:0003057!1.28e-11!12;UBERON:0002257!1.46e-09!3;UBERON:0002256!3.44e-07!2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,2.48e-72,6;UBERON:0005174,2.48e-72,6;UBERON:0001137,2.48e-72,6;UBERON:0001948,1.11e-55,5;UBERON:0002315,1.11e-55,5;UBERON:0003076,1.18e-36,12;UBERON:0003057,1.18e-36,12;UBERON:0002256,4.75e-35,2;UBERON:0002257,2.28e-24,3;UBERON:0000489,2.63e-21,21;UBERON:0003103,9.33e-11,43;UBERON:0001049,5.37e-09,52;UBERON:0005068,5.37e-09,52;UBERON:0006241,5.37e-09,52;UBERON:0007135,5.37e-09,52;UBERON:0002020,7.62e-09,34;UBERON:0002346,2.08e-07,64;UBERON:0003075,2.08e-07,64;UBERON:0007284,2.08e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42825492201902,1.98781686856452,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,2.35702868378934,3.55929201997757,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33765543618917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0.399024873401031,0,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0.758091635291392,0,0,0.280924522409647,0.128050304809739,0.114870937911227,0,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.145346416632329,0,0.25384382367503,0.365855945745545,0,0,0,0.355905054372522,0.197008964751127,0,0,0,0,0,0.214871054048298,0.382576664137687,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42825492201902,1.98781686856452,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,2.35702868378934,3.55929201997757,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33765543618917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0.399024873401031,0,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0.758091635291392,0,0,0.280924522409647,0.128050304809739,0.114870937911227,0,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0.177475806159338,0.476872379894642,0.145346416632329,0,0.25384382367503,0.365855945745545,0,0,0,0.355905054372522,0.197008964751127,0,0,0,0,0,0.214871054048298,0.382576664137687,0,0.231867835620421 | ||
|short_description=p@chr2:70053872..70053879,+ | |short_description=p@chr2:70053872..70053879,+ | ||
}} | }} |
Latest revision as of 09:45, 5 August 2015
Short description: | p@chr2:70053872..70053879, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:70053872..70053879, + |
Coexpression cluster: | MCL_coexpression_mm9:353 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the dorsal spinal cord | 4.75e-35 | 2 |
neuron of the ventral spinal cord | 2.28e-24 | 3 |
CNS neuron (sensu Vertebrata) | 9.24e-13 | 23 |
neuroblast (sensu Vertebrata) | 9.24e-13 | 23 |
neuron | 4.29e-09 | 33 |
neuronal stem cell | 4.29e-09 | 33 |
neuroblast | 4.29e-09 | 33 |
electrically signaling cell | 4.29e-09 | 33 |
electrically responsive cell | 8.71e-08 | 39 |
electrically active cell | 8.71e-08 | 39 |
neural cell | 4.09e-07 | 43 |
ectodermal cell | 5.77e-07 | 44 |
neurectodermal cell | 5.77e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 2.48e-72 | 6 |
dorsal region element | 2.48e-72 | 6 |
dorsum | 2.48e-72 | 6 |
regional part of spinal cord | 1.11e-55 | 5 |
gray matter of spinal cord | 1.11e-55 | 5 |
posterior neural tube | 1.18e-36 | 12 |
chordal neural plate | 1.18e-36 | 12 |
dorsal horn of spinal cord | 4.75e-35 | 2 |
ventral horn of spinal cord | 2.28e-24 | 3 |
cavitated compound organ | 2.63e-21 | 21 |
compound organ | 9.33e-11 | 43 |
neural tube | 5.37e-09 | 52 |
neural rod | 5.37e-09 | 52 |
future spinal cord | 5.37e-09 | 52 |
neural keel | 5.37e-09 | 52 |
gray matter | 7.62e-09 | 34 |
neurectoderm | 2.08e-07 | 64 |
neural plate | 2.08e-07 | 64 |
presumptive neural plate | 2.08e-07 | 64 |