FFCP PHASE1:Mm9::chr1:177422670..177422687,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=24012|HGNC=|MCL_coexpression_id=1|UniProt=Q80XD3,O54829|association_with_transcript=0bp_to_NM_001199003,NM_011880,uc007dtk.2,uc007dtl.2_5end|description=CAGE_peak_3_at_Rgs7_5end|id=chr1:177422670..177422687,-|ontology_enrichment_celltype=CL:0000117!1.75e-10!23;CL:0000337!1.75e-10!23;CL:0000540!3.82e-07!33;CL:0000047!3.82e-07!33;CL:0000031!3.82e-07!33;CL:0000404!3.82e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,4.28e-11,23;CL:0000337,4.28e-11,23;CL:0002610,1.98e-07,3;CL:0002612,3.65e-07,3;CL:0000540,5.30e-07,33;CL:0000047,5.30e-07,33;CL:0000031,5.30e-07,33;CL:0000404,5.30e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!7.67e-24!52;UBERON:0005068!7.67e-24!52;UBERON:0006241!7.67e-24!52;UBERON:0007135!7.67e-24!52;UBERON:0000955!9.60e-23!50;UBERON:0006238!9.60e-23!50;UBERON:0002346!1.16e-22!71;UBERON:0003075!1.16e-22!71;UBERON:0007284!1.16e-22!71;UBERON:0000073!2.67e-22!75;UBERON:0001016!2.67e-22!75;UBERON:0001017!5.52e-22!73;UBERON:0005743!5.52e-22!73;UBERON:0002616!6.70e-22!49;UBERON:0000033!5.64e-19!63;UBERON:0004121!6.57e-19!102;UBERON:0000924!6.57e-19!102;UBERON:0006601!6.57e-19!102;UBERON:0002020!7.12e-17!34;UBERON:0003080!1.02e-16!40;UBERON:0002780!5.29e-16!39;UBERON:0001890!5.29e-16!39;UBERON:0006240!5.29e-16!39;UBERON:0003056!9.02e-16!49;UBERON:0002791!1.28e-13!29;UBERON:0003528!1.28e-13!29;UBERON:0001893!1.28e-13!29;UBERON:0007811!8.38e-10!86;UBERON:0002021!1.65e-09!10;UBERON:0000411!1.65e-09!10;UBERON:0001950!1.65e-09!10;UBERON:0002619!5.50e-09!17;UBERON:0000956!6.94e-09!21;UBERON:0001869!6.94e-09!21;UBERON:0000203!6.94e-09!21;UBERON:0000153!5.08e-08!94;UBERON:0003076!8.08e-08!12;UBERON:0003057!8.08e-08!12;UBERON:0000025!4.15e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.01e-40,54;UBERON:0001049,1.44e-36,52;UBERON:0005068,1.44e-36,52;UBERON:0006241,1.44e-36,52;UBERON:0007135,1.44e-36,52;UBERON:0001017,2.07e-34,73;UBERON:0001016,2.72e-33,75;UBERON:0000955,1.10e-30,47;UBERON:0006238,1.10e-30,47;UBERON:0002616,8.03e-29,46;UBERON:0002346,2.16e-28,64;UBERON:0003075,2.16e-28,64;UBERON:0007284,2.16e-28,64;UBERON:0002020,1.28e-27,34;UBERON:0004121,1.10e-24,95;UBERON:0000924,1.10e-24,95;UBERON:0006601,1.10e-24,95;UBERON:0010371,5.06e-24,73;UBERON:0002021,3.97e-23,10;UBERON:0000411,3.97e-23,10;UBERON:0001950,3.97e-23,10;UBERON:0003080,5.18e-23,40;UBERON:0003528,7.30e-22,29;UBERON:0002791,7.30e-22,29;UBERON:0001893,7.30e-22,29;UBERON:0002780,2.01e-21,39;UBERON:0001890,2.01e-21,39;UBERON:0006240,2.01e-21,39;UBERON:0002619,5.87e-18,17;UBERON:0003056,8.37e-18,49;UBERON:0010314,1.33e-17,92;UBERON:0000956,1.05e-16,21;UBERON:0001869,1.05e-16,21;UBERON:0000203,1.05e-16,21;UBERON:0003076,2.78e-14,12;UBERON:0003057,2.78e-14,12;UBERON:0000025,4.90e-14,114;UBERON:0004111,1.21e-12,122;UBERON:0002240,6.14e-09,6;UBERON:0005174,6.14e-09,6;UBERON:0001137,6.14e-09,6;UBERON:0011216,3.98e-08,194;UBERON:0004684,1.98e-07,3;UBERON:0002275,1.98e-07,3;UBERON:0002257,3.65e-07,3;UBERON:0001948,4.74e-07,5;UBERON:0002315,4.74e-07,5;UBERON:0004733,6.21e-07,6;UBERON:0004732,6.21e-07,6;UBERON:0002028,6.21e-07,6;UBERON:0007277,6.21e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.436050312760893,0,0.194429899074283,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,2.53532561402472,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0.571301968807607,1.54607978666129,0.489963196859816,0.191690942036473,0,3.30347642998166,1.91531007127782,2.61131106535614,0.923204014111357,1.9212405156506,1.56274011167028,0.837548997004143,2.25105044012672,1.68078072554491,2.35702868378934,2.13557521198654,2.42319279572891,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0.742210695324124,0,0,0.230615497256059,0.301445281105245,0.587943535678524,0.502666365318702,0,2.89198713839823,0,0,0,0,0,4.9772735491963,5.65506108396329,0,0,0,0,2.39665023047716,0.457500602818626,2.1361239859187,4.17178368461463,6.39288643325826,3.1168206683934,3.73154905055843,0.203678727700633,0,0,0.210441855886474,0,0,0,0,0.408218994907967,0.384341160854549,0.562210347358373,0.517406741478031,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0.36012412292203,0,0,0,0,0,0,0,0.492502392237286,0.486412857275134,0.292399974850665,0,0.268412837520744,2.3131894342054,1.23485534855141,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0.983528546038072,0,2.88991061978026,3.16471553798949,0,0.252470927204373,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0.395287777946524,3.53453448063988,0.283880170416537,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36175842301515,0,0,0.214337035031592,0.177340233642274,0.535106452806212,0.987294123612726,0.608929898229199,0,0,0.441056796109924,0,0,0,0,0,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0.352071715937262,0,0.104859344425711,0,0.288030006257865,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0.167884616364078,0,0.187682475451182,0,0,0,2.82375921308533,1.84130094602871,2.29158205375759,2.92150409984269,4.7955776383945,4.5323633843382,8.10027000278167,3.60256962579376,9.06284817968409,4.65984280576638,0,0,0.341467211508268,0.729320151204882,0,0,0.44449345560323,0.412070114477788,0.64183841918363,0.252697211763798,1.01391719956096,0.754505365544305,0.0936415074698824,0.704276676453562,0.459483751644906,0.952587382566147,0.579421629724277,0.192909220463705,0.412085900803307,0,0.685738504770831,0.354951612318675,0.476872379894642,0.290692833264657,0.282328141245992,0.846146078916765,0.182927972872773,0.263069711437843,0.407412341537585,0,0.237270036248348,0.689531376628944,0.818462086339379,0.309873682371932,0,0.749431733813838,0.233931608445408,0.429742108096597,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p3@Rgs7}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:24012 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q80XD3,uniprot:O54829 | |||
|association_with_transcript=0bp_to_NM_001199003,NM_011880,uc007dtk.2,uc007dtl.2_5end | |||
|cluster_id=chr1:177422670..177422687,- | |||
|description=CAGE_peak_3_at_Rgs7_5end | |||
|id=chr1:177422670..177422687,- | |||
|ontology_enrichment_celltype=CL:0000117!1.75e-10!23;CL:0000337!1.75e-10!23;CL:0000540!3.82e-07!33;CL:0000047!3.82e-07!33;CL:0000031!3.82e-07!33;CL:0000404!3.82e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.28e-11,23;CL:0000337,4.28e-11,23;CL:0002610,1.98e-07,3;CL:0002612,3.65e-07,3;CL:0000540,5.30e-07,33;CL:0000047,5.30e-07,33;CL:0000031,5.30e-07,33;CL:0000404,5.30e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.67e-24!52;UBERON:0005068!7.67e-24!52;UBERON:0006241!7.67e-24!52;UBERON:0007135!7.67e-24!52;UBERON:0000955!9.60e-23!50;UBERON:0006238!9.60e-23!50;UBERON:0002346!1.16e-22!71;UBERON:0003075!1.16e-22!71;UBERON:0007284!1.16e-22!71;UBERON:0000073!2.67e-22!75;UBERON:0001016!2.67e-22!75;UBERON:0001017!5.52e-22!73;UBERON:0005743!5.52e-22!73;UBERON:0002616!6.70e-22!49;UBERON:0000033!5.64e-19!63;UBERON:0004121!6.57e-19!102;UBERON:0000924!6.57e-19!102;UBERON:0006601!6.57e-19!102;UBERON:0002020!7.12e-17!34;UBERON:0003080!1.02e-16!40;UBERON:0002780!5.29e-16!39;UBERON:0001890!5.29e-16!39;UBERON:0006240!5.29e-16!39;UBERON:0003056!9.02e-16!49;UBERON:0002791!1.28e-13!29;UBERON:0003528!1.28e-13!29;UBERON:0001893!1.28e-13!29;UBERON:0007811!8.38e-10!86;UBERON:0002021!1.65e-09!10;UBERON:0000411!1.65e-09!10;UBERON:0001950!1.65e-09!10;UBERON:0002619!5.50e-09!17;UBERON:0000956!6.94e-09!21;UBERON:0001869!6.94e-09!21;UBERON:0000203!6.94e-09!21;UBERON:0000153!5.08e-08!94;UBERON:0003076!8.08e-08!12;UBERON:0003057!8.08e-08!12;UBERON:0000025!4.15e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.01e-40,54;UBERON:0001049,1.44e-36,52;UBERON:0005068,1.44e-36,52;UBERON:0006241,1.44e-36,52;UBERON:0007135,1.44e-36,52;UBERON:0001017,2.07e-34,73;UBERON:0001016,2.72e-33,75;UBERON:0000955,1.10e-30,47;UBERON:0006238,1.10e-30,47;UBERON:0002616,8.03e-29,46;UBERON:0002346,2.16e-28,64;UBERON:0003075,2.16e-28,64;UBERON:0007284,2.16e-28,64;UBERON:0002020,1.28e-27,34;UBERON:0004121,1.10e-24,95;UBERON:0000924,1.10e-24,95;UBERON:0006601,1.10e-24,95;UBERON:0010371,5.06e-24,73;UBERON:0002021,3.97e-23,10;UBERON:0000411,3.97e-23,10;UBERON:0001950,3.97e-23,10;UBERON:0003080,5.18e-23,40;UBERON:0003528,7.30e-22,29;UBERON:0002791,7.30e-22,29;UBERON:0001893,7.30e-22,29;UBERON:0002780,2.01e-21,39;UBERON:0001890,2.01e-21,39;UBERON:0006240,2.01e-21,39;UBERON:0002619,5.87e-18,17;UBERON:0003056,8.37e-18,49;UBERON:0010314,1.33e-17,92;UBERON:0000956,1.05e-16,21;UBERON:0001869,1.05e-16,21;UBERON:0000203,1.05e-16,21;UBERON:0003076,2.78e-14,12;UBERON:0003057,2.78e-14,12;UBERON:0000025,4.90e-14,114;UBERON:0004111,1.21e-12,122;UBERON:0002240,6.14e-09,6;UBERON:0005174,6.14e-09,6;UBERON:0001137,6.14e-09,6;UBERON:0011216,3.98e-08,194;UBERON:0004684,1.98e-07,3;UBERON:0002275,1.98e-07,3;UBERON:0002257,3.65e-07,3;UBERON:0001948,4.74e-07,5;UBERON:0002315,4.74e-07,5;UBERON:0004733,6.21e-07,6;UBERON:0004732,6.21e-07,6;UBERON:0002028,6.21e-07,6;UBERON:0007277,6.21e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.436050312760893,0,0.194429899074283,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,2.53532561402472,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0.571301968807607,1.54607978666129,0.489963196859816,0.191690942036473,0,3.30347642998166,1.91531007127782,2.61131106535614,0.923204014111357,1.9212405156506,1.56274011167028,0.837548997004143,2.25105044012672,1.68078072554491,2.35702868378934,2.13557521198654,2.42319279572891,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0.742210695324124,0,0,0.230615497256059,0.301445281105245,0.587943535678524,0.502666365318702,0,2.89198713839823,0,0,0,0,0,4.9772735491963,5.65506108396329,0,0,0,0,2.39665023047716,0.457500602818626,2.1361239859187,4.17178368461463,6.39288643325826,3.1168206683934,3.73154905055843,0.203678727700633,0,0,0.210441855886474,0,0,0,0,0.408218994907967,0.384341160854549,0.562210347358373,0.517406741478031,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0.36012412292203,0,0,0,0,0,0,0,0.492502392237286,0.486412857275134,0.292399974850665,0,0.268412837520744,2.3131894342054,1.23485534855141,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0.983528546038072,0,2.88991061978026,3.16471553798949,0,0.252470927204373,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0.395287777946524,3.53453448063988,0.283880170416537,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36175842301515,0,0,0.214337035031592,0.177340233642274,0.535106452806212,0.987294123612726,0.608929898229199,0,0,0.441056796109924,0,0,0,0,0,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0.352071715937262,0,0.104859344425711,0,0.288030006257865,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0.167884616364078,0,0.187682475451182,0,0,0,2.82375921308533,1.84130094602871,2.29158205375759,2.92150409984269,4.7955776383945,4.5323633843382,8.10027000278167,3.60256962579376,9.06284817968409,4.65984280576638,0,0,0.341467211508268,0.729320151204882,0,0,0.44449345560323,0.412070114477788,0.64183841918363,0.252697211763798,1.01391719956096,0.754505365544305,0.0936415074698824,0.704276676453562,0.459483751644906,0.952587382566147,0.579421629724277,0.192909220463705,0.412085900803307,0,0.685738504770831,0.354951612318675,0.476872379894642,0.290692833264657,0.282328141245992,0.846146078916765,0.182927972872773,0.263069711437843,0.407412341537585,0,0.237270036248348,0.689531376628944,0.818462086339379,0.309873682371932,0,0.749431733813838,0.233931608445408,0.429742108096597,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p3@Rgs7 | |||
}} |
Revision as of 08:47, 5 August 2015
Short description: | p3@Rgs7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rgs7_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_NM_001199003, NM_011880, uc007dtk.2, uc007dtl.2_5end |
EntrezGene: | 24012 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.28e-11 | 23 |
neuroblast (sensu Vertebrata) | 4.28e-11 | 23 |
raphe nuclei neuron | 1.98e-07 | 3 |
neuron of the ventral spinal cord | 3.65e-07 | 3 |
neuron | 5.30e-07 | 33 |
neuronal stem cell | 5.30e-07 | 33 |
neuroblast | 5.30e-07 | 33 |
electrically signaling cell | 5.30e-07 | 33 |