FFCP PHASE1:Mm9::chr11:106612556..106612565,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=380732|HGNC=|MCL_coexpression_id=193|UniProt=B7ZP19|association_with_transcript=2bp_to_ENSMUST00000171308_5end|description=CAGE_peak_2_at_Gm885_5end|id=chr11:106612556..106612565,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000557,1.73e-14,7;CL:0000049,1.85e-12,19;CL:0000988,4.73e-11,32;CL:0002032,4.73e-11,32;CL:0000037,4.73e-11,32;CL:0000837,4.73e-11,32;CL:0002320,1.34e-10,46;CL:0000134,1.34e-10,46;CL:0002476,6.33e-10,2;CL:0000219,1.00e-08,54;CL:0000723,1.80e-07,91;CL:0000048,1.80e-07,91;CL:0000034,7.64e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.99e-13,3;DOID:4045,1.99e-13,3;DOID:0050686,6.20e-07,6|ontology_enrichment_uberon=UBERON:0001474!9.18e-10!22;UBERON:0004765!9.18e-10!22;UBERON:0001434!9.18e-10!22;UBERON:0002204!1.72e-09!32;UBERON:0002371!6.22e-08!16;UBERON:0002193!7.24e-08!48;UBERON:0002390!2.01e-07!45;UBERON:0003061!2.01e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.07e-11,16;UBERON:0002204,2.59e-11,32;UBERON:0002384,1.34e-10,46;UBERON:0001474,2.74e-08,22;UBERON:0004765,2.74e-08,22;UBERON:0001434,2.74e-08,22|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0.333109761815663,0.404950534779652,0,0.157731082679119,0.411343300817216,0,0.0850432901510698,2.38298282882125,4.70159620450084,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,6.27797446105362,6.2506827561904,8.37637990358077,12.9410927366823,11.6117732442936,8.73918635456076,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,1.7997994345628,0.988866362566974,2.1314403448383,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,2.33044095282455,0.593768556259299,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0.144599356919912,0.884610551949874,0.323533699894818,0.662524555381181,0.484875253135222,0,0,0,0.766371165625774,1.1981512450592,1.79970819298022,1.52484272487678,0,0,0,0,0,0,0.162241263067758,0,0.497627882440372,0,0,0,0,0,0,0.136072998302656,0.2562274405697,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0,2.1066395619397,1.02939162845886,1.13665399758237,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0,0.162137619091711,0.146199987425332,0.439100230582101,0.134206418760372,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0.502670417600539,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0.482354319504834,0.25462585178142,0.575392274901621,0.972811360650212,0.549122826376163,0,0,0,0,0.358794827043824,0,0.369506380333209,0,0,0.339490171550376,0,0,0,0.390267295715598,0.157635144106191,0.664394068946325,0.159454768657487,0.163863314715738,0.518054945597687,0.144649058581512,12.0633027151418,13.5976420954677,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0.377210159511796,0.295301892880773,0,0.516856586336442,0,0.356497378384721,0,1.05418608574999,0,0,0,0.258717367565509,0,0.177340233642274,0,0,0,0,0.21183207086382,0.220528398054962,0,0,0.361877549568935,0.358117032009409,0,0,0,0.341741761595705,0.619160603889667,1.85194527369712,0.188368457004691,0.27338845544205,0.228778173206523,0.509935289981566,0.279902904647316,0.138199973804424,0,0,0.203319467126849,0.216010681643603,0,0,0.404593039154462,0.330613822901344,0.26175594198403,1.03691978633434,0,0,0.299033092087958,0,0,0.258319646955462,0,0,0,0,0,0,0,0.202725215290164,0.205421914329655,0.649604114888975,0.716106782669926,0.198681354781265,0,0.147689527174577,0.605798699688886,0.228620419965,0.302478555410522,0,0,0.233753804363138,0.226730383615211,0,0,0,0,0,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0,0.206035057238894,0.320919209591815,0,0,0,0.187283014939765,0.128050304809739,0.114870937911227,0.476293691283074,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0,0.0941093804153306,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0,0,0.309873682371932,0.385813221962283,0,0.701794825336225,0.429742108096597,0,0.220591419119515,0|short_description=p2@Gm885}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:380732 | |||
|HGNC= | |||
|MCL_coexpression_id=193 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:B7ZP19 | |||
|association_with_transcript=2bp_to_ENSMUST00000171308_5end | |||
|cluster_id=chr11:106612556..106612565,+ | |||
|description=CAGE_peak_2_at_Gm885_5end | |||
|id=chr11:106612556..106612565,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,1.73e-14,7;CL:0000049,1.85e-12,19;CL:0000988,4.73e-11,32;CL:0002032,4.73e-11,32;CL:0000037,4.73e-11,32;CL:0000837,4.73e-11,32;CL:0002320,1.34e-10,46;CL:0000134,1.34e-10,46;CL:0002476,6.33e-10,2;CL:0000219,1.00e-08,54;CL:0000723,1.80e-07,91;CL:0000048,1.80e-07,91;CL:0000034,7.64e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.99e-13,3;DOID:4045,1.99e-13,3;DOID:0050686,6.20e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001474!9.18e-10!22;UBERON:0004765!9.18e-10!22;UBERON:0001434!9.18e-10!22;UBERON:0002204!1.72e-09!32;UBERON:0002371!6.22e-08!16;UBERON:0002193!7.24e-08!48;UBERON:0002390!2.01e-07!45;UBERON:0003061!2.01e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.07e-11,16;UBERON:0002204,2.59e-11,32;UBERON:0002384,1.34e-10,46;UBERON:0001474,2.74e-08,22;UBERON:0004765,2.74e-08,22;UBERON:0001434,2.74e-08,22 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0.333109761815663,0.404950534779652,0,0.157731082679119,0.411343300817216,0,0.0850432901510698,2.38298282882125,4.70159620450084,0,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,6.27797446105362,6.2506827561904,8.37637990358077,12.9410927366823,11.6117732442936,8.73918635456076,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,1.7997994345628,0.988866362566974,2.1314403448383,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,2.33044095282455,0.593768556259299,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0.144599356919912,0.884610551949874,0.323533699894818,0.662524555381181,0.484875253135222,0,0,0,0.766371165625774,1.1981512450592,1.79970819298022,1.52484272487678,0,0,0,0,0,0,0.162241263067758,0,0.497627882440372,0,0,0,0,0,0,0.136072998302656,0.2562274405697,0.0937017245597288,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0,2.1066395619397,1.02939162845886,1.13665399758237,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0,0.162137619091711,0.146199987425332,0.439100230582101,0.134206418760372,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0.502670417600539,0.198956472041151,0,0,0.216138049874694,0.199141273254367,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0.482354319504834,0.25462585178142,0.575392274901621,0.972811360650212,0.549122826376163,0,0,0,0,0.358794827043824,0,0.369506380333209,0,0,0.339490171550376,0,0,0,0.390267295715598,0.157635144106191,0.664394068946325,0.159454768657487,0.163863314715738,0.518054945597687,0.144649058581512,12.0633027151418,13.5976420954677,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0.377210159511796,0.295301892880773,0,0.516856586336442,0,0.356497378384721,0,1.05418608574999,0,0,0,0.258717367565509,0,0.177340233642274,0,0,0,0,0.21183207086382,0.220528398054962,0,0,0.361877549568935,0.358117032009409,0,0,0,0.341741761595705,0.619160603889667,1.85194527369712,0.188368457004691,0.27338845544205,0.228778173206523,0.509935289981566,0.279902904647316,0.138199973804424,0,0,0.203319467126849,0.216010681643603,0,0,0.404593039154462,0.330613822901344,0.26175594198403,1.03691978633434,0,0,0.299033092087958,0,0,0.258319646955462,0,0,0,0,0,0,0,0.202725215290164,0.205421914329655,0.649604114888975,0.716106782669926,0.198681354781265,0,0.147689527174577,0.605798699688886,0.228620419965,0.302478555410522,0,0,0.233753804363138,0.226730383615211,0,0,0,0,0,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0,0.206035057238894,0.320919209591815,0,0,0,0.187283014939765,0.128050304809739,0.114870937911227,0.476293691283074,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0,0.0941093804153306,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0,0,0.309873682371932,0.385813221962283,0,0.701794825336225,0.429742108096597,0,0.220591419119515,0 | |||
|short_description=p2@Gm885 | |||
}} |
Revision as of 08:02, 5 August 2015
Short description: | p2@Gm885 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gm885_5end |
Coexpression cluster: | MCL_coexpression_mm9:193 |
Association with transcript: | 2bp_to_ENSMUST00000171308_5end |
EntrezGene: | 380732 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 1.73e-14 | 7 |
common myeloid progenitor | 1.85e-12 | 19 |
hematopoietic cell | 4.73e-11 | 32 |
hematopoietic oligopotent progenitor cell | 4.73e-11 | 32 |
hematopoietic stem cell | 4.73e-11 | 32 |
hematopoietic multipotent progenitor cell | 4.73e-11 | 32 |
connective tissue cell | 1.34e-10 | 46 |
mesenchymal cell | 1.34e-10 | 46 |
bone marrow macrophage | 6.33e-10 | 2 |
motile cell | 1.00e-08 | 54 |
somatic stem cell | 1.80e-07 | 91 |
multi fate stem cell | 1.80e-07 | 91 |
stem cell | 7.64e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.07e-11 | 16 |
musculoskeletal system | 2.59e-11 | 32 |
connective tissue | 1.34e-10 | 46 |
bone element | 2.74e-08 | 22 |
skeletal element | 2.74e-08 | 22 |
skeletal system | 2.74e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.99e-13 | 3 |
muscle cancer | 1.99e-13 | 3 |
organ system cancer | 6.20e-07 | 6 |