FFCP PHASE1:Mm9::chr17:7032444..7032488,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr17:7032444..7032488,+ to FFCP PHASE1:Mm9::chr17:7032444..7032488,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:7032444..7032488,+ | |||
|description=CAGE_peak_at_chr17:7032444..7032488,+ | |||
|id=chr17:7032444..7032488,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.64e-10!32;CL:0002032!3.64e-10!32;CL:0000037!3.64e-10!32;CL:0000566!3.64e-10!32;CL:0000837!3.64e-10!32;CL:0000838!1.51e-09!12;CL:0000063!4.18e-09!66;CL:0000084!9.20e-09!11;CL:0000827!9.20e-09!11;CL:0000542!2.58e-08!13;CL:0000051!2.58e-08!13;CL:0002031!5.38e-08!25;CL:0000791!1.15e-07!9;CL:0000789!1.15e-07!9;CL:0002420!1.15e-07!9;CL:0002419!1.15e-07!9;CL:0000790!1.15e-07!9;CL:0000624!5.86e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.69e-23,32;CL:0002032,2.69e-23,32;CL:0000037,2.69e-23,32;CL:0000837,2.69e-23,32;CL:0000838,3.86e-21,12;CL:0002031,6.59e-21,25;CL:0000542,2.85e-19,13;CL:0000051,2.85e-19,13;CL:0000084,3.23e-19,11;CL:0000827,3.23e-19,11;CL:0000791,1.57e-16,9;CL:0000789,1.57e-16,9;CL:0002420,1.57e-16,9;CL:0002419,1.57e-16,9;CL:0000790,1.57e-16,9;CL:0002320,5.31e-16,46;CL:0000134,5.31e-16,46;CL:0000624,8.34e-15,8;CL:0000738,5.24e-14,17;CL:0002087,5.24e-14,17;CL:0000034,5.25e-13,97;CL:0000219,1.03e-12,54;CL:0002563,1.85e-11,9;CL:0002251,1.85e-11,9;CL:0000723,2.82e-11,91;CL:0000048,2.82e-11,91;CL:0000893,2.90e-11,6;CL:0002489,2.90e-11,6;CL:0000898,2.90e-11,6;CL:0000809,2.90e-11,6;CL:0000810,2.90e-11,6;CL:0000895,2.90e-11,6;CL:0000808,2.90e-11,6;CL:0000894,2.90e-11,6;CL:0000806,2.90e-11,6;CL:0000807,2.90e-11,6;CL:0000805,2.90e-11,6;CL:0002425,2.90e-11,6;CL:0002436,2.90e-11,6;CL:0002427,2.90e-11,6;CL:0002428,2.90e-11,6;CL:0002429,2.90e-11,6;CL:0002433,2.90e-11,6;CL:0002431,2.90e-11,6;CL:0002432,2.90e-11,6;CL:0000075,3.55e-08,7;CL:0002076,9.10e-08,15;CL:0000049,1.19e-07,19;CL:0000066,2.68e-07,25;CL:0000050,3.97e-07,9;CL:0000239,5.88e-07,6;CL:0000677,5.88e-07,6;CL:0000584,5.88e-07,6;CL:0000223,8.05e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,2.22e-08,6;DOID:0060100,4.73e-07,3;DOID:4045,4.73e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002370!9.45e-09!23;UBERON:0000974!9.45e-09!23;UBERON:0004807!9.45e-09!23;UBERON:0005058!9.45e-09!23;UBERON:0003351!9.45e-09!23;UBERON:0009113!9.45e-09!23;UBERON:0003295!9.45e-09!23;UBERON:0009722!9.45e-09!23;UBERON:0005562!9.45e-09!23;UBERON:0007690!9.45e-09!23;UBERON:0004177!4.36e-08!29;UBERON:0006562!5.27e-08!24;UBERON:0003408!5.27e-08!24;UBERON:0001557!5.27e-08!24;UBERON:0001042!5.27e-08!24;UBERON:0008814!5.27e-08!24;UBERON:0009145!5.27e-08!24;UBERON:0000072!7.17e-08!27;UBERON:0002390!1.92e-07!45;UBERON:0003061!1.92e-07!45;UBERON:0002193!2.70e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.31e-16,46;UBERON:0003350,1.85e-11,9;UBERON:0004808,1.85e-11,9;UBERON:0001277,1.85e-11,9;UBERON:0000485,2.22e-11,11;UBERON:0000490,7.69e-11,66;UBERON:0003929,5.16e-09,55;UBERON:0002370,1.70e-08,23;UBERON:0000974,1.70e-08,23;UBERON:0004807,1.70e-08,23;UBERON:0005058,1.70e-08,23;UBERON:0003351,1.70e-08,23;UBERON:0009113,1.70e-08,23;UBERON:0003295,1.70e-08,23;UBERON:0009722,1.70e-08,23;UBERON:0005562,1.70e-08,23;UBERON:0007690,1.70e-08,23;UBERON:0006562,4.96e-08,24;UBERON:0003408,4.96e-08,24;UBERON:0001557,4.96e-08,24;UBERON:0001042,4.96e-08,24;UBERON:0008814,4.96e-08,24;UBERON:0009145,4.96e-08,24;UBERON:0000072,5.27e-08,27;UBERON:0001242,1.77e-07,13;UBERON:0001262,1.77e-07,13;UBERON:0004786,1.77e-07,13;UBERON:0002390,1.97e-07,45;UBERON:0003061,1.97e-07,45 | |||
|phase1_expression=0.320297694209588,1.04692622291808,1.81999695755814,3.32710632437513,6.01074875935617,0.16787927191189,1.40167584357315,22.2092116319511,3.09735188733667,2.80877431586392,4.45166717386313,2.47293692885543,22.9408978107816,10.8401298999557,0.333109761815663,1.41732687172878,0,8.67520954735154,5.34746291062381,11.8829102503448,0.0850432901510698,1.68794617041505,1.56719873483361,0.159992422793407,0,1.14846392823004,0.430761996159075,0.430942465371778,0.570070258369122,0,0,4.44521471421742,3.07532393792285,0,3.46621943701529,3.65716219788683,3.06254034393554,24.6933662134776,17.9707129240474,9.94695113550217,214.116261643289,41.6657745824652,11.1667381197165,0,0,0.183546752161682,0,0.218025156380447,0,0,0,0,34.395434241836,7.25362142011344,7.39406358113421,0,0,0,0,0.528990979272033,0,0,0.889294796111139,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0,0.220868540951614,0,0.191690942036473,0,0,0,0.153606533256243,0.131886287730194,0,0,0,0,0,0,0.142371680799103,0.186399445825301,0,0,3.76823835312181,0,0,0,0,0,0,0,0,0,1.40843419776681,0,0,0,0.216491041011214,1.01343946190039,0,0.22836775943812,0.517875767294343,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0.494389935468748,0,0.884610551949874,0.323533699894818,0,0.484875253135222,0,0,0,0.255457055208591,1.55759661857696,2.99951365496704,1.52484272487678,0,0.457500602818626,0.125654352112864,0.173824320192276,0,0,0,0.203678727700633,0.248813941220186,0.758168275301024,0,0.260240885925407,0,0.180062129805349,0,0.204109497453984,0.12811372028485,0.0937017245597288,0.258703370739016,0.215567992932842,0.378212160335639,0.175951124163949,0.219195732427575,1.11218899690239,0,0,0.199034266818493,0.702213187313235,1.54408744268829,0.568326998791185,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0,0,0.411618449517138,0.330418782983798,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0.189667900953082,0,0,0,0,0.140271639780637,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0.315270288212382,0,0.159454768657487,0,0.345369963731791,0.289298117163023,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,1.17131623288992,0.215423397732799,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0.188605079755898,0,0,0,1.09060118843252,0,0,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0.214337035031592,0.354680467284547,0.535106452806212,0,0.608929898229199,0,0,0,0.16488625294148,0,0.120625849856312,0,0.164140899745061,0,0.18542530201051,0.683483523191411,0.206386867963223,0.185194527369712,0,0,0.457556346413045,1.35982743995084,2.51912614182584,1.93479963326193,0,0.474503990371703,0.609958401380546,0,0,0.218362563746178,0,0,0.26175594198403,0.129614973291793,0,0.56369293868419,0,0.165458490457098,0,0.258319646955462,0.168956125490778,0,0,0.104859344425711,0.241584120826006,0,2.21207784439725,0.810900861160657,0.616265742988964,0.51968329191118,1.25318686967237,1.39076948346885,0.961563596159751,1.32920574457119,0.908698049533329,0.914481679859998,0.705783295957884,0.292373642219257,1.44317762460494,1.8700304349051,0,0.443971906748129,0.269141569828427,0.167884616364078,0.19318959403219,0,0.183151624267265,0.214368379079066,0,0.564751842617067,0.460325236507177,0,0.343706364687375,0.685082519770642,0,0,0,0,0.51776031175182,0.31136204275253,0,0.512200817262403,0,0.209613162627982,0,0.222246727801615,0,0,0,0,0.188626341386076,0,0.128050304809739,0.114870937911227,0,0.231768651889711,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0,0.231867835620421 | |phase1_expression=0.320297694209588,1.04692622291808,1.81999695755814,3.32710632437513,6.01074875935617,0.16787927191189,1.40167584357315,22.2092116319511,3.09735188733667,2.80877431586392,4.45166717386313,2.47293692885543,22.9408978107816,10.8401298999557,0.333109761815663,1.41732687172878,0,8.67520954735154,5.34746291062381,11.8829102503448,0.0850432901510698,1.68794617041505,1.56719873483361,0.159992422793407,0,1.14846392823004,0.430761996159075,0.430942465371778,0.570070258369122,0,0,4.44521471421742,3.07532393792285,0,3.46621943701529,3.65716219788683,3.06254034393554,24.6933662134776,17.9707129240474,9.94695113550217,214.116261643289,41.6657745824652,11.1667381197165,0,0,0.183546752161682,0,0.218025156380447,0,0,0,0,34.395434241836,7.25362142011344,7.39406358113421,0,0,0,0,0.528990979272033,0,0,0.889294796111139,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0,0.220868540951614,0,0.191690942036473,0,0,0,0.153606533256243,0.131886287730194,0,0,0,0,0,0,0.142371680799103,0.186399445825301,0,0,3.76823835312181,0,0,0,0,0,0,0,0,0,1.40843419776681,0,0,0,0.216491041011214,1.01343946190039,0,0.22836775943812,0.517875767294343,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0.494389935468748,0,0.884610551949874,0.323533699894818,0,0.484875253135222,0,0,0,0.255457055208591,1.55759661857696,2.99951365496704,1.52484272487678,0,0.457500602818626,0.125654352112864,0.173824320192276,0,0,0,0.203678727700633,0.248813941220186,0.758168275301024,0,0.260240885925407,0,0.180062129805349,0,0.204109497453984,0.12811372028485,0.0937017245597288,0.258703370739016,0.215567992932842,0.378212160335639,0.175951124163949,0.219195732427575,1.11218899690239,0,0,0.199034266818493,0.702213187313235,1.54408744268829,0.568326998791185,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0,0,0.411618449517138,0.330418782983798,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0.189667900953082,0,0,0,0,0.140271639780637,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0.315270288212382,0,0.159454768657487,0,0.345369963731791,0.289298117163023,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,1.17131623288992,0.215423397732799,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0.188605079755898,0,0,0,1.09060118843252,0,0,0,0,0.680879211507576,0.18006109403131,0.129358683782755,0.214337035031592,0.354680467284547,0.535106452806212,0,0.608929898229199,0,0,0,0.16488625294148,0,0.120625849856312,0,0.164140899745061,0,0.18542530201051,0.683483523191411,0.206386867963223,0.185194527369712,0,0,0.457556346413045,1.35982743995084,2.51912614182584,1.93479963326193,0,0.474503990371703,0.609958401380546,0,0,0.218362563746178,0,0,0.26175594198403,0.129614973291793,0,0.56369293868419,0,0.165458490457098,0,0.258319646955462,0.168956125490778,0,0,0.104859344425711,0.241584120826006,0,2.21207784439725,0.810900861160657,0.616265742988964,0.51968329191118,1.25318686967237,1.39076948346885,0.961563596159751,1.32920574457119,0.908698049533329,0.914481679859998,0.705783295957884,0.292373642219257,1.44317762460494,1.8700304349051,0,0.443971906748129,0.269141569828427,0.167884616364078,0.19318959403219,0,0.183151624267265,0.214368379079066,0,0.564751842617067,0.460325236507177,0,0.343706364687375,0.685082519770642,0,0,0,0,0.51776031175182,0.31136204275253,0,0.512200817262403,0,0.209613162627982,0,0.222246727801615,0,0,0,0,0.188626341386076,0,0.128050304809739,0.114870937911227,0,0.231768651889711,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0,0.231867835620421 | ||
|short_description=p@chr17:7032444..7032488,+ | |||
}} | }} |
Latest revision as of 06:41, 5 August 2015
Short description: | p@chr17:7032444..7032488, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:7032444..7032488, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.31e-16 | 46 |
epithelium of mucosa | 1.85e-11 | 9 |
gastrointestinal system epithelium | 1.85e-11 | 9 |
intestinal epithelium | 1.85e-11 | 9 |
simple columnar epithelium | 2.22e-11 | 11 |
unilaminar epithelium | 7.69e-11 | 66 |
gut epithelium | 5.16e-09 | 55 |
thymus | 1.70e-08 | 23 |
neck | 1.70e-08 | 23 |
respiratory system epithelium | 1.70e-08 | 23 |
hemolymphoid system gland | 1.70e-08 | 23 |
pharyngeal epithelium | 1.70e-08 | 23 |
thymic region | 1.70e-08 | 23 |
pharyngeal gland | 1.70e-08 | 23 |
entire pharyngeal arch endoderm | 1.70e-08 | 23 |
thymus primordium | 1.70e-08 | 23 |
early pharyngeal endoderm | 1.70e-08 | 23 |
pharynx | 4.96e-08 | 24 |
gland of gut | 4.96e-08 | 24 |
upper respiratory tract | 4.96e-08 | 24 |
chordate pharynx | 4.96e-08 | 24 |
pharyngeal arch system | 4.96e-08 | 24 |
pharyngeal region of foregut | 4.96e-08 | 24 |
segment of respiratory tract | 5.27e-08 | 27 |
intestinal mucosa | 1.77e-07 | 13 |
wall of intestine | 1.77e-07 | 13 |
gastrointestinal system mucosa | 1.77e-07 | 13 |
hematopoietic system | 1.97e-07 | 45 |
blood island | 1.97e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 2.22e-08 | 6 |
musculoskeletal system cancer | 4.73e-07 | 3 |
muscle cancer | 4.73e-07 | 3 |