FFCP PHASE1:Mm9::chr9:48258396..48258425,+: Difference between revisions
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{{FFCP|EntrezGene=100045968,100505330,20826,434401|HGNC=|MCL_coexpression_id=81|UniProt=Q9D0T1|association_with_transcript=-75bp_to_ENSMUST00000165252_5end|description=CAGE_peak_3_at_Gm5616_5end,CAGE_peak_3_at_LOC100045968_5end,CAGE_peak_3_at_LOC100505330_5end,CAGE_peak_3_at_Nhp2l1_5end|id=chr9:48258396..48258425,+|ontology_enrichment_celltype=CL:0000063!2.66e-30!66;CL:0000144!1.14e-20!121;CL:0000012!1.14e-20!121;CL:0000988!1.17e-20!32;CL:0002032!1.17e-20!32;CL:0000037!1.17e-20!32;CL:0000566!1.17e-20!32;CL:0000837!1.17e-20!32;CL:0000548!1.57e-19!115;CL:0000004!1.57e-19!115;CL:0000255!1.57e-19!115;CL:0002371!1.30e-18!118;CL:0002031!7.21e-18!25;CL:0002320!2.61e-17!46;CL:0000134!2.61e-17!46;CL:0000219!7.27e-16!54;CL:0000034!1.27e-12!97;CL:0000838!6.24e-12!12;CL:0000738!4.50e-11!17;CL:0002087!4.50e-11!17;CL:0000049!4.86e-11!19;CL:0000791!5.60e-11!9;CL:0000789!5.60e-11!9;CL:0002420!5.60e-11!9;CL:0002419!5.60e-11!9;CL:0000790!5.60e-11!9;CL:0000084!8.06e-11!11;CL:0000827!8.06e-11!11;CL:0000066!8.52e-11!25;CL:0000542!9.32e-11!13;CL:0000051!9.32e-11!13;CL:0000624!5.60e-10!8;CL:0002076!2.30e-09!15;CL:0000723!5.74e-09!91;CL:0000048!5.74e-09!91;CL:0000763!1.81e-08!16;CL:0000893!3.71e-08!6;CL:0002489!3.71e-08!6;CL:0000898!3.71e-08!6;CL:0000809!3.71e-08!6;CL:0000810!3.71e-08!6;CL:0000895!3.71e-08!6;CL:0000808!3.71e-08!6;CL:0000894!3.71e-08!6;CL:0000806!3.71e-08!6;CL:0000807!3.71e-08!6;CL:0000805!3.71e-08!6;CL:0002425!3.71e-08!6;CL:0002436!3.71e-08!6;CL:0002427!3.71e-08!6;CL:0002428!3.71e-08!6;CL:0002429!3.71e-08!6;CL:0002433!3.71e-08!6;CL:0002431!3.71e-08!6;CL:0002432!3.71e-08!6;CL:0000839!1.51e-07!13;CL:0000223!1.54e-07!20;CL:0000050!4.20e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,2.06e-29,32;CL:0002032,2.06e-29,32;CL:0000037,2.06e-29,32;CL:0000837,2.06e-29,32;CL:0002320,6.56e-26,46;CL:0000134,6.56e-26,46;CL:0002031,3.47e-25,25;CL:0000219,2.02e-24,54;CL:0000034,7.30e-17,97;CL:0000838,3.47e-16,12;CL:0000049,1.46e-15,19;CL:0000738,1.77e-15,17;CL:0002087,1.77e-15,17;CL:0000542,9.95e-15,13;CL:0000051,9.95e-15,13;CL:0000791,1.20e-14,9;CL:0000789,1.20e-14,9;CL:0002420,1.20e-14,9;CL:0002419,1.20e-14,9;CL:0000790,1.20e-14,9;CL:0000084,1.23e-14,11;CL:0000827,1.23e-14,11;CL:0000624,2.94e-13,8;CL:0000763,6.16e-12,16;CL:0000723,8.55e-12,91;CL:0000048,8.55e-12,91;CL:0002076,5.05e-11,15;CL:0000893,9.88e-11,6;CL:0002489,9.88e-11,6;CL:0000898,9.88e-11,6;CL:0000809,9.88e-11,6;CL:0000810,9.88e-11,6;CL:0000895,9.88e-11,6;CL:0000808,9.88e-11,6;CL:0000894,9.88e-11,6;CL:0000806,9.88e-11,6;CL:0000807,9.88e-11,6;CL:0000805,9.88e-11,6;CL:0002425,9.88e-11,6;CL:0002436,9.88e-11,6;CL:0002427,9.88e-11,6;CL:0002428,9.88e-11,6;CL:0002429,9.88e-11,6;CL:0002433,9.88e-11,6;CL:0002431,9.88e-11,6;CL:0002432,9.88e-11,6;CL:0000839,1.60e-10,13;CL:0000050,1.23e-09,9;CL:0000223,2.68e-09,20;CL:0000066,4.05e-08,25;CL:0000553,5.33e-08,6;CL:0000556,5.33e-08,6;CL:0000068,6.87e-07,3;CL:0002202,6.87e-07,3;CL:0000069,6.87e-07,3;CL:0002632,6.87e-07,3;CL:0002368,6.87e-07,3;CL:0000307,6.87e-07,3;CL:0000377,6.87e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!2.61e-17!46;UBERON:0000344!1.65e-08!15;UBERON:0001242!9.54e-07!13;UBERON:0000060!9.54e-07!13;UBERON:0001262!9.54e-07!13;UBERON:0004786!9.54e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.56e-26,46;UBERON:0000344,6.51e-10,15;UBERON:0002193,8.51e-09,48;UBERON:0002405,8.51e-09,48;UBERON:0002371,7.57e-08,16;UBERON:0001242,1.42e-07,13;UBERON:0001262,1.42e-07,13;UBERON:0004786,1.42e-07,13;UBERON:0002390,1.74e-07,45;UBERON:0003061,1.74e-07,45;UBERON:0003126,6.87e-07,3;UBERON:0001005,6.87e-07,3;UBERON:0007196,6.87e-07,3;UBERON:0001558,6.87e-07,3|phase1_expression=0.640595388419176,0,0,0.60492842261366,2.50447864973174,1.51091344720701,4.43864017131499,2.96983643915625,11.2630977721333,6.31974221069382,18.8339765048055,8.77493748948701,7.53283211697305,2.36035086531293,0,10.1237633694913,10.4934281719222,7.5710919685977,7.12995054749842,13.1560792057389,0,0,10.7091913546964,4.15980299262857,5.73523202667925,0.57423196411502,0.86152399231815,0.861884930743556,3.42042155021473,1.76421090831952,1.33038306393183,3.81018404075779,0,15.8481681015439,2.02196133825892,3.32469290716985,1.02084678131185,0,0,0,0.588231488031014,0.683045484958446,0,0,0,0,0,0,0,0,0,0,8.72469551500229,5.07753499407941,5.37750078627942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0,0,0,0.186399445825301,7.04253597998612,3.85414956544606,5.79728977403356,2.58127163094416,0,0,0,0,0,0,7.53379413348319,9.54016851177919,1.69012103732017,3.84979432242953,2.54805239706646,0,11.2575341325831,11.6545538118545,11.62706223534,0,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,3.59445373517761,5.99902730993408,2.41433431438823,0,0,0,0,0,0.20778804455956,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80885274925294,4.37491442095016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.04747703635634,11.4220193601929,0,0,0,0,0.163934945376675,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18984900995699,1.53946597556024,1.24379976423981,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8773117153292,8.97138566094757,9.23365390002431,0,0,0,0,0,0,0,0,5.32744865265431,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0.409231043169689,0.154936841185966,0,0,0,0,0,0,0|short_description=p3@Gm5616,p3@LOC100045968,p3@LOC100505330,p3@Nhp2l1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:100045968,entrezgene:100505330,entrezgene:20826,entrezgene:434401 | |||
|HGNC= | |||
|MCL_coexpression_id=81 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9D0T1 | |||
|association_with_transcript=-75bp_to_ENSMUST00000165252_5end | |||
|cluster_id=chr9:48258396..48258425,+ | |||
|description=CAGE_peak_3_at_Gm5616_5end,CAGE_peak_3_at_LOC100045968_5end,CAGE_peak_3_at_LOC100505330_5end,CAGE_peak_3_at_Nhp2l1_5end | |||
|id=chr9:48258396..48258425,+ | |||
|ontology_enrichment_celltype=CL:0000063!2.66e-30!66;CL:0000144!1.14e-20!121;CL:0000012!1.14e-20!121;CL:0000988!1.17e-20!32;CL:0002032!1.17e-20!32;CL:0000037!1.17e-20!32;CL:0000566!1.17e-20!32;CL:0000837!1.17e-20!32;CL:0000548!1.57e-19!115;CL:0000004!1.57e-19!115;CL:0000255!1.57e-19!115;CL:0002371!1.30e-18!118;CL:0002031!7.21e-18!25;CL:0002320!2.61e-17!46;CL:0000134!2.61e-17!46;CL:0000219!7.27e-16!54;CL:0000034!1.27e-12!97;CL:0000838!6.24e-12!12;CL:0000738!4.50e-11!17;CL:0002087!4.50e-11!17;CL:0000049!4.86e-11!19;CL:0000791!5.60e-11!9;CL:0000789!5.60e-11!9;CL:0002420!5.60e-11!9;CL:0002419!5.60e-11!9;CL:0000790!5.60e-11!9;CL:0000084!8.06e-11!11;CL:0000827!8.06e-11!11;CL:0000066!8.52e-11!25;CL:0000542!9.32e-11!13;CL:0000051!9.32e-11!13;CL:0000624!5.60e-10!8;CL:0002076!2.30e-09!15;CL:0000723!5.74e-09!91;CL:0000048!5.74e-09!91;CL:0000763!1.81e-08!16;CL:0000893!3.71e-08!6;CL:0002489!3.71e-08!6;CL:0000898!3.71e-08!6;CL:0000809!3.71e-08!6;CL:0000810!3.71e-08!6;CL:0000895!3.71e-08!6;CL:0000808!3.71e-08!6;CL:0000894!3.71e-08!6;CL:0000806!3.71e-08!6;CL:0000807!3.71e-08!6;CL:0000805!3.71e-08!6;CL:0002425!3.71e-08!6;CL:0002436!3.71e-08!6;CL:0002427!3.71e-08!6;CL:0002428!3.71e-08!6;CL:0002429!3.71e-08!6;CL:0002433!3.71e-08!6;CL:0002431!3.71e-08!6;CL:0002432!3.71e-08!6;CL:0000839!1.51e-07!13;CL:0000223!1.54e-07!20;CL:0000050!4.20e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.06e-29,32;CL:0002032,2.06e-29,32;CL:0000037,2.06e-29,32;CL:0000837,2.06e-29,32;CL:0002320,6.56e-26,46;CL:0000134,6.56e-26,46;CL:0002031,3.47e-25,25;CL:0000219,2.02e-24,54;CL:0000034,7.30e-17,97;CL:0000838,3.47e-16,12;CL:0000049,1.46e-15,19;CL:0000738,1.77e-15,17;CL:0002087,1.77e-15,17;CL:0000542,9.95e-15,13;CL:0000051,9.95e-15,13;CL:0000791,1.20e-14,9;CL:0000789,1.20e-14,9;CL:0002420,1.20e-14,9;CL:0002419,1.20e-14,9;CL:0000790,1.20e-14,9;CL:0000084,1.23e-14,11;CL:0000827,1.23e-14,11;CL:0000624,2.94e-13,8;CL:0000763,6.16e-12,16;CL:0000723,8.55e-12,91;CL:0000048,8.55e-12,91;CL:0002076,5.05e-11,15;CL:0000893,9.88e-11,6;CL:0002489,9.88e-11,6;CL:0000898,9.88e-11,6;CL:0000809,9.88e-11,6;CL:0000810,9.88e-11,6;CL:0000895,9.88e-11,6;CL:0000808,9.88e-11,6;CL:0000894,9.88e-11,6;CL:0000806,9.88e-11,6;CL:0000807,9.88e-11,6;CL:0000805,9.88e-11,6;CL:0002425,9.88e-11,6;CL:0002436,9.88e-11,6;CL:0002427,9.88e-11,6;CL:0002428,9.88e-11,6;CL:0002429,9.88e-11,6;CL:0002433,9.88e-11,6;CL:0002431,9.88e-11,6;CL:0002432,9.88e-11,6;CL:0000839,1.60e-10,13;CL:0000050,1.23e-09,9;CL:0000223,2.68e-09,20;CL:0000066,4.05e-08,25;CL:0000553,5.33e-08,6;CL:0000556,5.33e-08,6;CL:0000068,6.87e-07,3;CL:0002202,6.87e-07,3;CL:0000069,6.87e-07,3;CL:0002632,6.87e-07,3;CL:0002368,6.87e-07,3;CL:0000307,6.87e-07,3;CL:0000377,6.87e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.61e-17!46;UBERON:0000344!1.65e-08!15;UBERON:0001242!9.54e-07!13;UBERON:0000060!9.54e-07!13;UBERON:0001262!9.54e-07!13;UBERON:0004786!9.54e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.56e-26,46;UBERON:0000344,6.51e-10,15;UBERON:0002193,8.51e-09,48;UBERON:0002405,8.51e-09,48;UBERON:0002371,7.57e-08,16;UBERON:0001242,1.42e-07,13;UBERON:0001262,1.42e-07,13;UBERON:0004786,1.42e-07,13;UBERON:0002390,1.74e-07,45;UBERON:0003061,1.74e-07,45;UBERON:0003126,6.87e-07,3;UBERON:0001005,6.87e-07,3;UBERON:0007196,6.87e-07,3;UBERON:0001558,6.87e-07,3 | |||
|phase1_expression=0.640595388419176,0,0,0.60492842261366,2.50447864973174,1.51091344720701,4.43864017131499,2.96983643915625,11.2630977721333,6.31974221069382,18.8339765048055,8.77493748948701,7.53283211697305,2.36035086531293,0,10.1237633694913,10.4934281719222,7.5710919685977,7.12995054749842,13.1560792057389,0,0,10.7091913546964,4.15980299262857,5.73523202667925,0.57423196411502,0.86152399231815,0.861884930743556,3.42042155021473,1.76421090831952,1.33038306393183,3.81018404075779,0,15.8481681015439,2.02196133825892,3.32469290716985,1.02084678131185,0,0,0,0.588231488031014,0.683045484958446,0,0,0,0,0,0,0,0,0,0,8.72469551500229,5.07753499407941,5.37750078627942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0,0,0,0.186399445825301,7.04253597998612,3.85414956544606,5.79728977403356,2.58127163094416,0,0,0,0,0,0,7.53379413348319,9.54016851177919,1.69012103732017,3.84979432242953,2.54805239706646,0,11.2575341325831,11.6545538118545,11.62706223534,0,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,3.59445373517761,5.99902730993408,2.41433431438823,0,0,0,0,0,0.20778804455956,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80885274925294,4.37491442095016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.04747703635634,11.4220193601929,0,0,0,0,0.163934945376675,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18984900995699,1.53946597556024,1.24379976423981,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8773117153292,8.97138566094757,9.23365390002431,0,0,0,0,0,0,0,0,5.32744865265431,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0.409231043169689,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p3@Gm5616,p3@LOC100045968,p3@LOC100505330,p3@Nhp2l1 | |||
}} |
Revision as of 06:12, 5 August 2015
Short description: | p3@Gm5616, p3@LOC100045968, p3@LOC100505330, p3@Nhp2l1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gm5616_5end, CAGE_peak_3_at_LOC100045968_5end, CAGE_peak_3_at_LOC100505330_5end, CAGE_peak_3_at_Nhp2l1_5end |
Coexpression cluster: | MCL_coexpression_mm9:81 |
Association with transcript: | -75bp_to_ENSMUST00000165252_5end |
EntrezGene: | 100045968,100505330,20826,434401 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.56e-26 | 46 |
mucosa | 6.51e-10 | 15 |
hemolymphoid system | 8.51e-09 | 48 |
immune system | 8.51e-09 | 48 |
bone marrow | 7.57e-08 | 16 |
intestinal mucosa | 1.42e-07 | 13 |
wall of intestine | 1.42e-07 | 13 |
gastrointestinal system mucosa | 1.42e-07 | 13 |
hematopoietic system | 1.74e-07 | 45 |
blood island | 1.74e-07 | 45 |
trachea | 6.87e-07 | 3 |
respiratory airway | 6.87e-07 | 3 |
tracheobronchial tree | 6.87e-07 | 3 |
lower respiratory tract | 6.87e-07 | 3 |