FFCP PHASE1:Mm9::chr11:102807325..102807370,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=558 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:102807325..102807370,- | |||
|description=CAGE_peak_at_chr11:102807325..102807370,- | |description=CAGE_peak_at_chr11:102807325..102807370,- | ||
|id=chr11:102807325..102807370,- | |id=chr11:102807325..102807370,- | ||
|ontology_enrichment_celltype=CL:0002319!9.18e-20!43;CL:0000221!3.80e-19!44;CL:0000133!3.80e-19!44;CL:0000055!5.65e-16!50;CL:0000540!1.13e-12!33;CL:0000047!1.13e-12!33;CL:0000031!1.13e-12!33;CL:0000404!1.13e-12!33;CL:0002453!5.47e-11!8;CL:0000393!5.72e-10!39;CL:0000211!5.72e-10!39;CL:0002321!2.03e-09!70;CL:0000220!2.03e-09!70;CL:0000333!1.69e-08!10;CL:0000095!1.69e-08!10;CL:0000243!1.69e-08!10;CL:0000123!1.69e-08!10;CL:0000125!1.69e-08!10;CL:0000030!1.69e-08!10;CL:0000339!1.69e-08!10;CL:0000117!4.00e-08!23;CL:0000337!4.00e-08!23;CL:0000128!1.33e-07!6;CL:0000126!1.33e-07!6;CL:0000127!1.33e-07!6 | |ontology_enrichment_celltype=CL:0002319!9.18e-20!43;CL:0000221!3.80e-19!44;CL:0000133!3.80e-19!44;CL:0000055!5.65e-16!50;CL:0000540!1.13e-12!33;CL:0000047!1.13e-12!33;CL:0000031!1.13e-12!33;CL:0000404!1.13e-12!33;CL:0002453!5.47e-11!8;CL:0000393!5.72e-10!39;CL:0000211!5.72e-10!39;CL:0002321!2.03e-09!70;CL:0000220!2.03e-09!70;CL:0000333!1.69e-08!10;CL:0000095!1.69e-08!10;CL:0000243!1.69e-08!10;CL:0000123!1.69e-08!10;CL:0000125!1.69e-08!10;CL:0000030!1.69e-08!10;CL:0000339!1.69e-08!10;CL:0000117!4.00e-08!23;CL:0000337!4.00e-08!23;CL:0000128!1.33e-07!6;CL:0000126!1.33e-07!6;CL:0000127!1.33e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000878,2.05e-16,2;CL:0000129,2.05e-16,2;CL:0002319,2.71e-16,43;CL:0000221,6.62e-16,44;CL:0000133,6.62e-16,44;CL:0002453,1.31e-15,8;CL:0000333,1.50e-12,10;CL:0000095,1.50e-12,10;CL:0000243,1.50e-12,10;CL:0000123,1.50e-12,10;CL:0000125,1.50e-12,10;CL:0000030,1.50e-12,10;CL:0000339,1.50e-12,10;CL:0002612,2.47e-10,3;CL:0002321,1.13e-09,70;CL:0002194,1.14e-08,4;CL:0000766,1.14e-08,4;CL:0000234,1.14e-08,4;CL:0000576,1.14e-08,4;CL:0000235,1.14e-08,4;CL:0000864,1.14e-08,4;CL:0002009,1.14e-08,4;CL:0000040,1.14e-08,4;CL:0000559,1.14e-08,4;CL:0000540,1.29e-07,33;CL:0000047,1.29e-07,33;CL:0000031,1.29e-07,33;CL:0000404,1.29e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.73e-22!73;UBERON:0005743!2.73e-22!73;UBERON:0004121!9.25e-22!102;UBERON:0000924!9.25e-22!102;UBERON:0006601!9.25e-22!102;UBERON:0000073!1.99e-21!75;UBERON:0001016!1.99e-21!75;UBERON:0002346!4.43e-17!71;UBERON:0003075!4.43e-17!71;UBERON:0007284!4.43e-17!71;UBERON:0001049!5.30e-13!52;UBERON:0005068!5.30e-13!52;UBERON:0006241!5.30e-13!52;UBERON:0007135!5.30e-13!52;UBERON:0002020!1.17e-10!34;UBERON:0003076!2.08e-10!12;UBERON:0003057!2.08e-10!12;UBERON:0002240!4.16e-10!6;UBERON:0005174!4.16e-10!6;UBERON:0001137!4.16e-10!6;UBERON:0000033!6.82e-10!63;UBERON:0000955!1.14e-09!50;UBERON:0006238!1.14e-09!50;UBERON:0001948!4.91e-09!5;UBERON:0002315!4.91e-09!5;UBERON:0002616!7.48e-09!49;UBERON:0003056!2.84e-07!49 | |ontology_enrichment_uberon=UBERON:0001017!2.73e-22!73;UBERON:0005743!2.73e-22!73;UBERON:0004121!9.25e-22!102;UBERON:0000924!9.25e-22!102;UBERON:0006601!9.25e-22!102;UBERON:0000073!1.99e-21!75;UBERON:0001016!1.99e-21!75;UBERON:0002346!4.43e-17!71;UBERON:0003075!4.43e-17!71;UBERON:0007284!4.43e-17!71;UBERON:0001049!5.30e-13!52;UBERON:0005068!5.30e-13!52;UBERON:0006241!5.30e-13!52;UBERON:0007135!5.30e-13!52;UBERON:0002020!1.17e-10!34;UBERON:0003076!2.08e-10!12;UBERON:0003057!2.08e-10!12;UBERON:0002240!4.16e-10!6;UBERON:0005174!4.16e-10!6;UBERON:0001137!4.16e-10!6;UBERON:0000033!6.82e-10!63;UBERON:0000955!1.14e-09!50;UBERON:0006238!1.14e-09!50;UBERON:0001948!4.91e-09!5;UBERON:0002315!4.91e-09!5;UBERON:0002616!7.48e-09!49;UBERON:0003056!2.84e-07!49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.35e-13,73;UBERON:0001948,1.54e-13,5;UBERON:0002315,1.54e-13,5;UBERON:0001016,3.30e-13,75;UBERON:0002240,2.19e-11,6;UBERON:0005174,2.19e-11,6;UBERON:0001137,2.19e-11,6;UBERON:0002257,2.47e-10,3;UBERON:0004121,3.22e-10,95;UBERON:0000924,3.22e-10,95;UBERON:0006601,3.22e-10,95;UBERON:0003076,5.05e-10,12;UBERON:0003057,5.05e-10,12;UBERON:0002346,1.65e-08,64;UBERON:0003075,1.65e-08,64;UBERON:0007284,1.65e-08,64;UBERON:0001049,2.14e-08,52;UBERON:0005068,2.14e-08,52;UBERON:0006241,2.14e-08,52;UBERON:0007135,2.14e-08,52;UBERON:0000073,4.64e-08,54;UBERON:0002020,1.76e-07,34;UBERON:0010371,2.36e-07,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9119567217402,0.65407546914134,0.439372365468944,2.52758868796568,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.69240209984969,10.7581125490035,0,0.135005938331691,0,0.571301968807607,1.54607978666129,0,0,0,0,0.127687338085188,0.614426133024974,0.263772575460388,0.548925861614458,0,0.837548997004143,0,1.22238598221448,1.17851434189467,1.13897344639282,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,1.24672826735736,0,0,0,0,0,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,1.29254038639679,0.238968797952552,0.445597348164788,0.849229592366497,0.404810701674894,1.16902343164525,0,0.321321316421807,0,0.35613120733451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0,1.35096360967266,0,0,0.103787347584177,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9119567217402,0.65407546914134,0.439372365468944,2.52758868796568,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.69240209984969,10.7581125490035,0,0.135005938331691,0,0.571301968807607,1.54607978666129,0,0,0,0,0.127687338085188,0.614426133024974,0.263772575460388,0.548925861614458,0,0.837548997004143,0,1.22238598221448,1.17851434189467,1.13897344639282,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0,0,1.24672826735736,0,0,0,0,0,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,1.29254038639679,0.238968797952552,0.445597348164788,0.849229592366497,0.404810701674894,1.16902343164525,0,0.321321316421807,0,0.35613120733451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0,1.35096360967266,0,0,0.103787347584177,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:102807325..102807370,- | |short_description=p@chr11:102807325..102807370,- | ||
}} | }} |
Latest revision as of 05:55, 5 August 2015
Short description: | p@chr11:102807325..102807370, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:102807325..102807370, - |
Coexpression cluster: | MCL_coexpression_mm9:558 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system macrophage | 2.05e-16 | 2 |
microglial cell | 2.05e-16 | 2 |
neural cell | 2.71e-16 | 43 |
ectodermal cell | 6.62e-16 | 44 |
neurectodermal cell | 6.62e-16 | 44 |
oligodendrocyte precursor cell | 1.31e-15 | 8 |
migratory neural crest cell | 1.50e-12 | 10 |
neuron associated cell | 1.50e-12 | 10 |
glial cell (sensu Vertebrata) | 1.50e-12 | 10 |
neuron associated cell (sensu Vertebrata) | 1.50e-12 | 10 |
glial cell | 1.50e-12 | 10 |
glioblast | 1.50e-12 | 10 |
glioblast (sensu Vertebrata) | 1.50e-12 | 10 |
neuron of the ventral spinal cord | 2.47e-10 | 3 |
embryonic cell | 1.13e-09 | 70 |
monopoietic cell | 1.14e-08 | 4 |
myeloid leukocyte | 1.14e-08 | 4 |
phagocyte | 1.14e-08 | 4 |
monocyte | 1.14e-08 | 4 |
macrophage | 1.14e-08 | 4 |
tissue-resident macrophage | 1.14e-08 | 4 |
macrophage dendritic cell progenitor | 1.14e-08 | 4 |
monoblast | 1.14e-08 | 4 |
promonocyte | 1.14e-08 | 4 |
neuron | 1.29e-07 | 33 |
neuronal stem cell | 1.29e-07 | 33 |
neuroblast | 1.29e-07 | 33 |
electrically signaling cell | 1.29e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.35e-13 | 73 |
regional part of spinal cord | 1.54e-13 | 5 |
gray matter of spinal cord | 1.54e-13 | 5 |
nervous system | 3.30e-13 | 75 |
spinal cord | 2.19e-11 | 6 |
dorsal region element | 2.19e-11 | 6 |
dorsum | 2.19e-11 | 6 |
ventral horn of spinal cord | 2.47e-10 | 3 |
ectoderm-derived structure | 3.22e-10 | 95 |
ectoderm | 3.22e-10 | 95 |
presumptive ectoderm | 3.22e-10 | 95 |
posterior neural tube | 5.05e-10 | 12 |
chordal neural plate | 5.05e-10 | 12 |
neurectoderm | 1.65e-08 | 64 |
neural plate | 1.65e-08 | 64 |
presumptive neural plate | 1.65e-08 | 64 |
neural tube | 2.14e-08 | 52 |
neural rod | 2.14e-08 | 52 |
future spinal cord | 2.14e-08 | 52 |
neural keel | 2.14e-08 | 52 |
regional part of nervous system | 4.64e-08 | 54 |
gray matter | 1.76e-07 | 34 |
ecto-epithelium | 2.36e-07 | 73 |