FFCP PHASE1:Mm9::chr11:102749161..102749174,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=205 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:102749161..102749174,- | |||
|description=CAGE_peak_at_chr11:102749161..102749174,- | |description=CAGE_peak_at_chr11:102749161..102749174,- | ||
|id=chr11:102749161..102749174,- | |id=chr11:102749161..102749174,- | ||
|ontology_enrichment_celltype=CL:0002319!3.05e-12!43;CL:0000221!7.74e-12!44;CL:0000133!7.74e-12!44;CL:0002453!8.07e-12!8;CL:0000333!2.69e-11!10;CL:0000095!2.69e-11!10;CL:0000243!2.69e-11!10;CL:0000123!2.69e-11!10;CL:0000125!2.69e-11!10;CL:0000030!2.69e-11!10;CL:0000339!2.69e-11!10;CL:0000055!9.23e-10!50;CL:0000128!2.67e-08!6;CL:0000126!2.67e-08!6;CL:0000127!2.67e-08!6 | |ontology_enrichment_celltype=CL:0002319!3.05e-12!43;CL:0000221!7.74e-12!44;CL:0000133!7.74e-12!44;CL:0002453!8.07e-12!8;CL:0000333!2.69e-11!10;CL:0000095!2.69e-11!10;CL:0000243!2.69e-11!10;CL:0000123!2.69e-11!10;CL:0000125!2.69e-11!10;CL:0000030!2.69e-11!10;CL:0000339!2.69e-11!10;CL:0000055!9.23e-10!50;CL:0000128!2.67e-08!6;CL:0000126!2.67e-08!6;CL:0000127!2.67e-08!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,2.28e-32,8;CL:0000333,8.73e-26,10;CL:0000095,8.73e-26,10;CL:0000243,8.73e-26,10;CL:0000123,8.73e-26,10;CL:0000125,8.73e-26,10;CL:0000030,8.73e-26,10;CL:0000339,8.73e-26,10;CL:0002319,1.54e-25,43;CL:0000221,6.45e-25,44;CL:0000133,6.45e-25,44;CL:0000128,5.02e-22,6;CL:0000126,5.02e-22,6;CL:0000127,5.02e-22,6;CL:0002614,9.09e-16,3;CL:0002321,6.20e-15,70;CL:0000117,2.02e-13,23;CL:0000337,2.02e-13,23;CL:0000878,2.99e-12,2;CL:0000129,2.99e-12,2;CL:0002605,4.92e-12,2;CL:0002604,4.92e-12,2;CL:0002611,1.03e-11,2;CL:0000540,4.40e-09,33;CL:0000047,4.40e-09,33;CL:0000031,4.40e-09,33;CL:0000404,4.40e-09,33;CL:0002612,8.07e-08,3;CL:0000393,1.52e-07,39;CL:0000211,1.52e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.69e-22!75;UBERON:0001016!1.69e-22!75;UBERON:0001017!4.89e-22!73;UBERON:0005743!4.89e-22!73;UBERON:0004121!4.07e-18!102;UBERON:0000924!4.07e-18!102;UBERON:0006601!4.07e-18!102;UBERON:0001049!1.58e-15!52;UBERON:0005068!1.58e-15!52;UBERON:0006241!1.58e-15!52;UBERON:0007135!1.58e-15!52;UBERON:0000955!4.23e-14!50;UBERON:0006238!4.23e-14!50;UBERON:0002346!1.81e-13!71;UBERON:0003075!1.81e-13!71;UBERON:0007284!1.81e-13!71;UBERON:0002616!4.58e-13!49;UBERON:0000033!6.63e-12!63;UBERON:0003076!1.35e-11!12;UBERON:0003057!1.35e-11!12;UBERON:0002020!1.88e-11!34;UBERON:0002298!9.92e-11!6;UBERON:0002240!2.76e-08!6;UBERON:0005174!2.76e-08!6;UBERON:0001137!2.76e-08!6;UBERON:0002950!9.47e-08!4;UBERON:0001891!9.47e-08!4;UBERON:0009616!9.47e-08!4;UBERON:0007811!1.15e-07!86;UBERON:0002791!1.78e-07!29;UBERON:0003528!1.78e-07!29;UBERON:0001893!1.78e-07!29;UBERON:0003080!2.33e-07!40;UBERON:0003056!6.26e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,5.54e-22,6;UBERON:0005174,5.54e-22,6;UBERON:0001137,5.54e-22,6;UBERON:0003076,1.41e-20,12;UBERON:0003057,1.41e-20,12;UBERON:0001017,1.01e-18,73;UBERON:0001016,3.61e-18,75;UBERON:0001948,4.06e-17,5;UBERON:0002315,4.06e-17,5;UBERON:0002038,9.09e-16,3;UBERON:0009663,9.09e-16,3;UBERON:0009661,9.09e-16,3;UBERON:0000125,9.09e-16,3;UBERON:0002308,9.09e-16,3;UBERON:0004121,6.62e-14,95;UBERON:0000924,6.62e-14,95;UBERON:0006601,6.62e-14,95;UBERON:0001049,8.71e-13,52;UBERON:0005068,8.71e-13,52;UBERON:0006241,8.71e-13,52;UBERON:0007135,8.71e-13,52;UBERON:0000073,3.88e-12,54;UBERON:0002950,5.63e-12,4;UBERON:0001891,5.63e-12,4;UBERON:0009616,5.63e-12,4;UBERON:0010286,5.63e-12,4;UBERON:0002256,1.03e-11,2;UBERON:0002020,2.13e-11,34;UBERON:0002346,4.56e-10,64;UBERON:0003075,4.56e-10,64;UBERON:0007284,4.56e-10,64;UBERON:0010371,1.30e-08,73;UBERON:0002257,8.07e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,14.7189742432096,17.1098311185369,3.77963338388479,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,20.6724076257699,36.5007390055477,0,0,0,2.57085885963423,5.07997644188711,0,0,0,1.10115880999389,0.383062014255563,0.153606533256243,0,0,0,1.3959149950069,1.12552522006336,2.44477196442896,2.35702868378934,1.99320353118744,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0.125666591329675,0,0,0,0,0.220841518460394,0,0,0,0.83778682725382,0,0,0,0,0.449371918214468,0.457500602818626,0,0.347648640384553,0.255715457330331,0.41557608911912,0.324482526135515,0,0,0,0,0,0,0,0,0,0.384341160854549,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.205809224758569,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.393117990226406,0.224862112384854,0.405720242777006,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,1.05490517932983,0,0,0,0,0,0.477937595905104,0,0.283076530788832,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8939313422207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.68741272937475,0,0,0.675022500231806,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0.220591419119515,0.463735671240843 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74420125104357,14.7189742432096,17.1098311185369,3.77963338388479,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,20.6724076257699,36.5007390055477,0,0,0,2.57085885963423,5.07997644188711,0,0,0,1.10115880999389,0.383062014255563,0.153606533256243,0,0,0,1.3959149950069,1.12552522006336,2.44477196442896,2.35702868378934,1.99320353118744,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0.125666591329675,0,0,0,0,0.220841518460394,0,0,0,0.83778682725382,0,0,0,0,0.449371918214468,0.457500602818626,0,0.347648640384553,0.255715457330331,0.41557608911912,0.324482526135515,0,0,0,0,0,0,0,0,0,0.384341160854549,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.205809224758569,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.393117990226406,0.224862112384854,0.405720242777006,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,1.05490517932983,0,0,0,0,0,0.477937595905104,0,0.283076530788832,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.8939313422207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.68741272937475,0,0,0.675022500231806,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0.220591419119515,0.463735671240843 | ||
|short_description=p@chr11:102749161..102749174,- | |short_description=p@chr11:102749161..102749174,- | ||
}} | }} |
Latest revision as of 05:52, 5 August 2015
Short description: | p@chr11:102749161..102749174, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:102749161..102749174, - |
Coexpression cluster: | MCL_coexpression_mm9:205 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 2.28e-32 | 8 |
migratory neural crest cell | 8.73e-26 | 10 |
neuron associated cell | 8.73e-26 | 10 |
glial cell (sensu Vertebrata) | 8.73e-26 | 10 |
neuron associated cell (sensu Vertebrata) | 8.73e-26 | 10 |
glial cell | 8.73e-26 | 10 |
glioblast | 8.73e-26 | 10 |
glioblast (sensu Vertebrata) | 8.73e-26 | 10 |
neural cell | 1.54e-25 | 43 |
ectodermal cell | 6.45e-25 | 44 |
neurectodermal cell | 6.45e-25 | 44 |
oligodendrocyte | 5.02e-22 | 6 |
macroglial cell | 5.02e-22 | 6 |
astrocyte | 5.02e-22 | 6 |
neuron of the substantia nigra | 9.09e-16 | 3 |
embryonic cell | 6.20e-15 | 70 |
CNS neuron (sensu Vertebrata) | 2.02e-13 | 23 |
neuroblast (sensu Vertebrata) | 2.02e-13 | 23 |
central nervous system macrophage | 2.99e-12 | 2 |
microglial cell | 2.99e-12 | 2 |
astrocyte of the cerebral cortex | 4.92e-12 | 2 |
astrocyte of the hippocampus | 4.92e-12 | 2 |
neuron of the dorsal spinal cord | 1.03e-11 | 2 |
neuron | 4.40e-09 | 33 |
neuronal stem cell | 4.40e-09 | 33 |
neuroblast | 4.40e-09 | 33 |
electrically signaling cell | 4.40e-09 | 33 |
neuron of the ventral spinal cord | 8.07e-08 | 3 |
electrically responsive cell | 1.52e-07 | 39 |
electrically active cell | 1.52e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 5.54e-22 | 6 |
dorsal region element | 5.54e-22 | 6 |
dorsum | 5.54e-22 | 6 |
posterior neural tube | 1.41e-20 | 12 |
chordal neural plate | 1.41e-20 | 12 |
central nervous system | 1.01e-18 | 73 |
nervous system | 3.61e-18 | 75 |
regional part of spinal cord | 4.06e-17 | 5 |
gray matter of spinal cord | 4.06e-17 | 5 |
substantia nigra | 9.09e-16 | 3 |
telencephalic nucleus | 9.09e-16 | 3 |
midbrain nucleus | 9.09e-16 | 3 |
neural nucleus | 9.09e-16 | 3 |
nucleus of brain | 9.09e-16 | 3 |
ectoderm-derived structure | 6.62e-14 | 95 |
ectoderm | 6.62e-14 | 95 |
presumptive ectoderm | 6.62e-14 | 95 |
neural tube | 8.71e-13 | 52 |
neural rod | 8.71e-13 | 52 |
future spinal cord | 8.71e-13 | 52 |
neural keel | 8.71e-13 | 52 |
regional part of nervous system | 3.88e-12 | 54 |
regional part of midbrain | 5.63e-12 | 4 |
midbrain | 5.63e-12 | 4 |
presumptive midbrain | 5.63e-12 | 4 |
midbrain neural tube | 5.63e-12 | 4 |
dorsal horn of spinal cord | 1.03e-11 | 2 |
gray matter | 2.13e-11 | 34 |
neurectoderm | 4.56e-10 | 64 |
neural plate | 4.56e-10 | 64 |
presumptive neural plate | 4.56e-10 | 64 |
ecto-epithelium | 1.30e-08 | 73 |
ventral horn of spinal cord | 8.07e-08 | 3 |