FFCP PHASE1:Mm9::chr1:173090439..173090466,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=560 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:173090439..173090466,+ | |||
|description=CAGE_peak_at_chr1:173090439..173090466,+ | |description=CAGE_peak_at_chr1:173090439..173090466,+ | ||
|id=chr1:173090439..173090466,+ | |id=chr1:173090439..173090466,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002611,3.45e-15,2;CL:0002612,3.67e-10,3;CL:0000710,2.16e-08,1;CL:0002077,2.16e-08,1;CL:0005014,2.16e-08,1;CL:0002315,2.16e-08,1;CL:0002490,2.16e-08,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002240!4.91e-08!6;UBERON:0005174!4.91e-08!6;UBERON:0001137!4.91e-08!6;UBERON:0000075!1.67e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,1.29e-28,6;UBERON:0005174,1.29e-28,6;UBERON:0001137,1.29e-28,6;UBERON:0001948,1.09e-22,5;UBERON:0002315,1.09e-22,5;UBERON:0002256,3.45e-15,2;UBERON:0003076,2.38e-14,12;UBERON:0003057,2.38e-14,12;UBERON:0002257,3.67e-10,3;UBERON:0000489,3.47e-08,21;UBERON:0001374,5.62e-08,1;UBERON:0004252,5.62e-08,1;UBERON:0003663,5.62e-08,1;UBERON:0005090,5.62e-08,1;UBERON:0001630,5.62e-08,1;UBERON:0003661,5.62e-08,1;UBERON:0010890,5.62e-08,1;UBERON:0001383,5.62e-08,1 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1403883917483,33.3511496836936,0,0,0,0,0,0,0,0,0,0,0,0,8.2496003932627,10.3931326983345,0,16.9626673066332,0.68014404096107,0,0,0,0,0,0,0.421333260395256,0,0,0,15.6336195952115,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.301445281105245,0.23517741427141,0,0,0,0,1.45590164952668,0.662524555381181,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0.374806898238915,0.776110112217047,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0.117211686592203,0,2.01976741763498,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0,0.329098041204242,0,0,0,0,0.49465875882444,0,0.603129249281559,0.238744688006273,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0.100966449948148,0.304827226619999,0.201652370273681,0,0.0962118416403295,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0.263069711437843,0,0.561142271657738,0,0,0,0,0,0,0.467863216890817,1.28922632428979,1.72159498861959,5.07360263974886,3.94175320554716 | |phase1_expression=0.640595388419176,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1403883917483,33.3511496836936,0,0,0,0,0,0,0,0,0,0,0,0,8.2496003932627,10.3931326983345,0,16.9626673066332,0.68014404096107,0,0,0,0,0,0,0.421333260395256,0,0,0,15.6336195952115,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0.301445281105245,0.23517741427141,0,0,0,0,1.45590164952668,0.662524555381181,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0.374806898238915,0.776110112217047,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0.117211686592203,0,2.01976741763498,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0,0.329098041204242,0,0,0,0,0.49465875882444,0,0.603129249281559,0.238744688006273,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0.100966449948148,0.304827226619999,0.201652370273681,0,0.0962118416403295,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0.263069711437843,0,0.561142271657738,0,0,0,0,0,0,0.467863216890817,1.28922632428979,1.72159498861959,5.07360263974886,3.94175320554716 | ||
|short_description=p@chr1:173090439..173090466,+ | |short_description=p@chr1:173090439..173090466,+ | ||
}} | }} |
Latest revision as of 05:44, 5 August 2015
Short description: | p@chr1:173090439..173090466, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:173090439..173090466, + |
Coexpression cluster: | MCL_coexpression_mm9:560 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the dorsal spinal cord | 3.45e-15 | 2 |
neuron of the ventral spinal cord | 3.67e-10 | 3 |
neurecto-epithelial cell | 2.16e-08 | 1 |
ecto-epithelial cell | 2.16e-08 | 1 |
auditory epithelial support cell | 2.16e-08 | 1 |
supporting cell of cochlea | 2.16e-08 | 1 |
organ of Corti supporting cell | 2.16e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 1.29e-28 | 6 |
dorsal region element | 1.29e-28 | 6 |
dorsum | 1.29e-28 | 6 |
regional part of spinal cord | 1.09e-22 | 5 |
gray matter of spinal cord | 1.09e-22 | 5 |
dorsal horn of spinal cord | 3.45e-15 | 2 |
posterior neural tube | 2.38e-14 | 12 |
chordal neural plate | 2.38e-14 | 12 |
ventral horn of spinal cord | 3.67e-10 | 3 |
cavitated compound organ | 3.47e-08 | 21 |
biceps femoris | 5.62e-08 | 1 |
hindlimb stylopod muscle | 5.62e-08 | 1 |
hindlimb muscle | 5.62e-08 | 1 |
muscle structure | 5.62e-08 | 1 |
muscle organ | 5.62e-08 | 1 |
limb muscle | 5.62e-08 | 1 |
pelvic complex muscle | 5.62e-08 | 1 |
muscle of leg | 5.62e-08 | 1 |