FFCP PHASE1:Mm9::chr1:173090190..173090207,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=560 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:173090190..173090207,+ | |||
|description=CAGE_peak_at_chr1:173090190..173090207,+ | |description=CAGE_peak_at_chr1:173090190..173090207,+ | ||
|id=chr1:173090190..173090207,+ | |id=chr1:173090190..173090207,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002611,1.07e-17,2;CL:0002612,7.41e-12,3;CL:0000710,2.52e-09,1;CL:0002077,2.52e-09,1;CL:0005014,2.52e-09,1;CL:0002315,2.52e-09,1;CL:0002490,2.52e-09,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002240!5.14e-09!6;UBERON:0005174!5.14e-09!6;UBERON:0001137!5.14e-09!6;UBERON:0001948!2.51e-07!5;UBERON:0002315!2.51e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,1.00e-26,5;UBERON:0002315,1.00e-26,5;UBERON:0002240,2.39e-22,6;UBERON:0005174,2.39e-22,6;UBERON:0001137,2.39e-22,6;UBERON:0002256,1.07e-17,2;UBERON:0002257,7.41e-12,3;UBERON:0003076,2.35e-11,12;UBERON:0003057,2.35e-11,12;UBERON:0001374,4.39e-09,1;UBERON:0004252,4.39e-09,1;UBERON:0003663,4.39e-09,1;UBERON:0005090,4.39e-09,1;UBERON:0001630,4.39e-09,1;UBERON:0003661,4.39e-09,1;UBERON:0010890,4.39e-09,1;UBERON:0001383,4.39e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.56952953211411,22.7494597180162,0,0,0,0,0,0,0,0,0,0,0,0,4.71405736757868,8.25755748634797,0,5.37655972665607,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,4.08445917352373,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0.125666591329675,0,0,0,0.161766849947409,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0.12811372028485,0.281105173679186,1.03481348295606,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0.551873492609465,0,0,0,1.76729649043061,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0.49465875882444,0,0.361877549568935,0.238744688006273,0.164140899745061,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240390899039938,0,0,0.15241361331,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,1.98532277207564,1.85494268496337 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.56952953211411,22.7494597180162,0,0,0,0,0,0,0,0,0,0,0,0,4.71405736757868,8.25755748634797,0,5.37655972665607,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,4.08445917352373,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0.125666591329675,0,0,0,0.161766849947409,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0.12811372028485,0.281105173679186,1.03481348295606,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0.551873492609465,0,0,0,1.76729649043061,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0.49465875882444,0,0.361877549568935,0.238744688006273,0.164140899745061,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240390899039938,0,0,0.15241361331,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,1.98532277207564,1.85494268496337 | ||
|short_description=p@chr1:173090190..173090207,+ | |short_description=p@chr1:173090190..173090207,+ | ||
}} | }} |
Latest revision as of 05:44, 5 August 2015
Short description: | p@chr1:173090190..173090207, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:173090190..173090207, + |
Coexpression cluster: | MCL_coexpression_mm9:560 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the dorsal spinal cord | 1.07e-17 | 2 |
neuron of the ventral spinal cord | 7.41e-12 | 3 |
neurecto-epithelial cell | 2.52e-09 | 1 |
ecto-epithelial cell | 2.52e-09 | 1 |
auditory epithelial support cell | 2.52e-09 | 1 |
supporting cell of cochlea | 2.52e-09 | 1 |
organ of Corti supporting cell | 2.52e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 1.00e-26 | 5 |
gray matter of spinal cord | 1.00e-26 | 5 |
spinal cord | 2.39e-22 | 6 |
dorsal region element | 2.39e-22 | 6 |
dorsum | 2.39e-22 | 6 |
dorsal horn of spinal cord | 1.07e-17 | 2 |
ventral horn of spinal cord | 7.41e-12 | 3 |
posterior neural tube | 2.35e-11 | 12 |
chordal neural plate | 2.35e-11 | 12 |
biceps femoris | 4.39e-09 | 1 |
hindlimb stylopod muscle | 4.39e-09 | 1 |
hindlimb muscle | 4.39e-09 | 1 |
muscle structure | 4.39e-09 | 1 |
muscle organ | 4.39e-09 | 1 |
limb muscle | 4.39e-09 | 1 |
pelvic complex muscle | 4.39e-09 | 1 |
muscle of leg | 4.39e-09 | 1 |