FFCP PHASE1:Mm9::chr4:150241198..150241210,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=99|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:150241198..150241210,+|id=chr4:150241198..150241210,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,5.82e-20,5;CL:0000223,1.82e-07,20;CL:0000057,3.20e-07,1;CL:0000632,3.20e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!4.58e-09!22;UBERON:0007499!4.58e-09!22;UBERON:0006925!4.58e-09!22;UBERON:0009497!4.58e-09!22;UBERON:0000015!4.58e-09!22;UBERON:0002423!4.58e-09!22;UBERON:0006235!4.58e-09!22;UBERON:0008835!4.58e-09!22;UBERON:0003894!4.58e-09!22;UBERON:0004161!4.58e-09!22;UBERON:0008836!4.58e-09!22;UBERON:0009854!2.13e-08!23;UBERON:0009856!2.13e-08!23;UBERON:0003914!2.09e-07!47;UBERON:0002365!3.06e-07!25;UBERON:0002330!3.06e-07!25|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.22e-21,22;UBERON:0007499,2.22e-21,22;UBERON:0006925,2.22e-21,22;UBERON:0009497,2.22e-21,22;UBERON:0000015,2.22e-21,22;UBERON:0002423,2.22e-21,22;UBERON:0006235,2.22e-21,22;UBERON:0008835,2.22e-21,22;UBERON:0003894,2.22e-21,22;UBERON:0004161,2.22e-21,22;UBERON:0008836,2.22e-21,22;UBERON:0009854,2.07e-20,23;UBERON:0009856,2.07e-20,23;UBERON:0002365,1.06e-18,25;UBERON:0002330,1.06e-18,25;UBERON:0005256,3.16e-12,45;UBERON:0003914,1.18e-11,47;UBERON:0003929,9.08e-10,55;UBERON:0000490,1.23e-09,66;UBERON:0005172,4.90e-09,49;UBERON:0005173,4.90e-09,49;UBERON:0002417,4.90e-09,49;UBERON:0000916,4.90e-09,49;UBERON:0003104,1.08e-08,61;UBERON:0009142,1.08e-08,61;UBERON:0005911,1.58e-07,69;UBERON:0002368,3.54e-07,60;UBERON:0000949,3.56e-07,72|phase1_expression=0,0,0,0,1.00179145989269,0,0.233612640595526,0,0.140788722151667,0.468129052643987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,0.782391344348039,0,0,0.388859798148567,0.139986421625363,0,0.167782606057736,0,0,0.771778308107841,0.85960031981627,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0.0914876436024097,0.52091337055676,0,0,0,0.294628585473668,0,0.186399445825301,0.075726193333184,0,0,2.58127163094416,27.8788246820178,6.47643829965381,3.24888208723835,4.48026887097336,0.561777680527007,0,0.259786004602869,0,0,0,0,0,0.649473123033642,0.760079596425296,0,2.51204535381932,0,0,0,0,0.230615497256059,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0.83778682725382,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0.378212160335639,0,0.43839146485515,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0.308534225774757,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0.432276099749388,0.199141273254367,0.379335801906163,0.228497025219458,0,0,0,0.420814919341911,0.189709611372772,0.147610147979602,0.156998727841375,0.616985819609003,0.296452627087149,0,0,0.224862112384854,0.202860121388503,0,0,0.287696137450811,8.59316701907687,0.549122826376163,5.75072826109418,1.48856379067401,0.312037673114561,0.505157755894224,0.179397413521912,4.3419916922703,0.554259570499814,0,0,0,0.234690248288502,0.167506257441816,0,0,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0,0,0,0,0.425820255624806,0.178065603667255,0.162886959353576,0.659880491890142,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0.18006109403131,0,0.214337035031592,0.177340233642274,0,0.164549020602121,0,2.11204537257339,0.63549621259146,0.220528398054962,0,0.484393280087717,0.120625849856312,0.119372344003136,0,0.291480836629851,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0,0.388844919875379,0,0.56369293868419,0,0.165458490457098,0,0,0,0,0,0.419437377702843,0,0,0,0.202725215290164,0,0.25984164595559,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0.448569283047378,0.503653849092235,0,0.750729901804728,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0,0.798049746802062,0,0,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0,0,0,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0.214871054048298,0.382576664137687,0,0|short_description=p@chr4:150241198..150241210,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=99 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:150241198..150241210,+ | |||
|description=CAGE_peak_at_chr4:150241198..150241210,+ | |||
|id=chr4:150241198..150241210,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.82e-20,5;CL:0000223,1.82e-07,20;CL:0000057,3.20e-07,1;CL:0000632,3.20e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.58e-09!22;UBERON:0007499!4.58e-09!22;UBERON:0006925!4.58e-09!22;UBERON:0009497!4.58e-09!22;UBERON:0000015!4.58e-09!22;UBERON:0002423!4.58e-09!22;UBERON:0006235!4.58e-09!22;UBERON:0008835!4.58e-09!22;UBERON:0003894!4.58e-09!22;UBERON:0004161!4.58e-09!22;UBERON:0008836!4.58e-09!22;UBERON:0009854!2.13e-08!23;UBERON:0009856!2.13e-08!23;UBERON:0003914!2.09e-07!47;UBERON:0002365!3.06e-07!25;UBERON:0002330!3.06e-07!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.22e-21,22;UBERON:0007499,2.22e-21,22;UBERON:0006925,2.22e-21,22;UBERON:0009497,2.22e-21,22;UBERON:0000015,2.22e-21,22;UBERON:0002423,2.22e-21,22;UBERON:0006235,2.22e-21,22;UBERON:0008835,2.22e-21,22;UBERON:0003894,2.22e-21,22;UBERON:0004161,2.22e-21,22;UBERON:0008836,2.22e-21,22;UBERON:0009854,2.07e-20,23;UBERON:0009856,2.07e-20,23;UBERON:0002365,1.06e-18,25;UBERON:0002330,1.06e-18,25;UBERON:0005256,3.16e-12,45;UBERON:0003914,1.18e-11,47;UBERON:0003929,9.08e-10,55;UBERON:0000490,1.23e-09,66;UBERON:0005172,4.90e-09,49;UBERON:0005173,4.90e-09,49;UBERON:0002417,4.90e-09,49;UBERON:0000916,4.90e-09,49;UBERON:0003104,1.08e-08,61;UBERON:0009142,1.08e-08,61;UBERON:0005911,1.58e-07,69;UBERON:0002368,3.54e-07,60;UBERON:0000949,3.56e-07,72 | |||
|phase1_expression=0,0,0,0,1.00179145989269,0,0.233612640595526,0,0.140788722151667,0.468129052643987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0.367093504323363,0.782391344348039,0,0,0.388859798148567,0.139986421625363,0,0.167782606057736,0,0,0.771778308107841,0.85960031981627,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0.0914876436024097,0.52091337055676,0,0,0,0.294628585473668,0,0.186399445825301,0.075726193333184,0,0,2.58127163094416,27.8788246820178,6.47643829965381,3.24888208723835,4.48026887097336,0.561777680527007,0,0.259786004602869,0,0,0,0,0,0.649473123033642,0.760079596425296,0,2.51204535381932,0,0,0,0,0.230615497256059,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0.83778682725382,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0.378212160335639,0,0.43839146485515,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0.308534225774757,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0.432276099749388,0.199141273254367,0.379335801906163,0.228497025219458,0,0,0,0.420814919341911,0.189709611372772,0.147610147979602,0.156998727841375,0.616985819609003,0.296452627087149,0,0,0.224862112384854,0.202860121388503,0,0,0.287696137450811,8.59316701907687,0.549122826376163,5.75072826109418,1.48856379067401,0.312037673114561,0.505157755894224,0.179397413521912,4.3419916922703,0.554259570499814,0,0,0,0.234690248288502,0.167506257441816,0,0,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0,0,0,0,0.425820255624806,0.178065603667255,0.162886959353576,0.659880491890142,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0.18006109403131,0,0.214337035031592,0.177340233642274,0,0.164549020602121,0,2.11204537257339,0.63549621259146,0.220528398054962,0,0.484393280087717,0.120625849856312,0.119372344003136,0,0.291480836629851,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0.324016022465404,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0,0.388844919875379,0,0.56369293868419,0,0.165458490457098,0,0,0,0,0,0.419437377702843,0,0,0,0.202725215290164,0,0.25984164595559,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0.448569283047378,0.503653849092235,0,0.750729901804728,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0,0.798049746802062,0,0,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0,0,0,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0.214871054048298,0.382576664137687,0,0 | |||
|short_description=p@chr4:150241198..150241210,+ | |||
}} |
Latest revision as of 05:38, 5 August 2015
Short description: | p@chr4:150241198..150241210, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:150241198..150241210, + |
Coexpression cluster: | MCL_coexpression_mm9:99 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.82e-20 | 5 |
endodermal cell | 1.82e-07 | 20 |
fibroblast | 3.20e-07 | 1 |
hepatic stellate cell | 3.20e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
liver | 2.22e-21 | 22 |
epithelial sac | 2.22e-21 | 22 |
digestive gland | 2.22e-21 | 22 |
epithelium of foregut-midgut junction | 2.22e-21 | 22 |
anatomical boundary | 2.22e-21 | 22 |
hepatobiliary system | 2.22e-21 | 22 |
foregut-midgut junction | 2.22e-21 | 22 |
hepatic diverticulum | 2.22e-21 | 22 |
liver primordium | 2.22e-21 | 22 |
septum transversum | 2.22e-21 | 22 |
liver bud | 2.22e-21 | 22 |
digestive tract diverticulum | 2.07e-20 | 23 |
sac | 2.07e-20 | 23 |
exocrine gland | 1.06e-18 | 25 |
exocrine system | 1.06e-18 | 25 |
trunk mesenchyme | 3.16e-12 | 45 |
epithelial tube | 1.18e-11 | 47 |
gut epithelium | 9.08e-10 | 55 |
unilaminar epithelium | 1.23e-09 | 66 |
abdomen element | 4.90e-09 | 49 |
abdominal segment element | 4.90e-09 | 49 |
abdominal segment of trunk | 4.90e-09 | 49 |
abdomen | 4.90e-09 | 49 |
mesenchyme | 1.08e-08 | 61 |
entire embryonic mesenchyme | 1.08e-08 | 61 |
endo-epithelium | 1.58e-07 | 69 |
endocrine gland | 3.54e-07 | 60 |
endocrine system | 3.56e-07 | 72 |