FFCP PHASE1:Mm9::chr7:38971273..38971281,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |MCL_coexpression_id=58 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:38971273..38971281,+ | |||
|description=CAGE_peak_at_chr7:38971273..38971281,+ | |description=CAGE_peak_at_chr7:38971273..38971281,+ | ||
|id=chr7:38971273..38971281,+ | |id=chr7:38971273..38971281,+ | ||
|ontology_enrichment_celltype=CL:0000473!1.80e-14!3;CL:0000627!1.80e-14!3;CL:0000682!1.80e-14!3;CL:0000239!5.68e-12!6;CL:0000677!5.68e-12!6;CL:0000212!5.68e-12!6;CL:0000584!5.68e-12!6;CL:0000075!2.79e-10!7;CL:0000066!5.00e-08!25;CL:0002563!5.10e-08!9;CL:0002251!5.10e-08!9 | |ontology_enrichment_celltype=CL:0000473!1.80e-14!3;CL:0000627!1.80e-14!3;CL:0000682!1.80e-14!3;CL:0000239!5.68e-12!6;CL:0000677!5.68e-12!6;CL:0000212!5.68e-12!6;CL:0000584!5.68e-12!6;CL:0000075!2.79e-10!7;CL:0000066!5.00e-08!25;CL:0002563!5.10e-08!9;CL:0002251!5.10e-08!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,8.04e-22,3;CL:0000239,3.01e-18,6;CL:0000677,3.01e-18,6;CL:0000584,3.01e-18,6;CL:0000075,1.08e-15,7;CL:0000066,5.19e-13,25;CL:0002563,2.83e-12,9;CL:0002251,2.83e-12,9;CL:0000473,1.07e-09,7;CL:0000815,8.96e-08,1;CL:0000792,8.96e-08,1;CL:0002076,1.84e-07,15 | |||
|ontology_enrichment_disease=DOID:0060100!4.22e-13!3;DOID:4045!4.22e-13!3;DOID:0050686!8.59e-07!6 | |ontology_enrichment_disease=DOID:0060100!4.22e-13!3;DOID:4045!4.22e-13!3;DOID:0050686!8.59e-07!6 | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!8.89e-14!15;UBERON:0001962!4.51e-10!2;UBERON:0001961!4.51e-10!2;UBERON:0001744!4.51e-10!2;UBERON:0001242!2.54e-08!13;UBERON:0000060!2.54e-08!13;UBERON:0001262!2.54e-08!13;UBERON:0004786!2.54e-08!13;UBERON:0004923!2.65e-08!24;UBERON:0003350!5.10e-08!9;UBERON:0004808!5.10e-08!9;UBERON:0001277!5.10e-08!9;UBERON:0002465!5.58e-07!3 | |ontology_enrichment_uberon=UBERON:0000344!8.89e-14!15;UBERON:0001962!4.51e-10!2;UBERON:0001961!4.51e-10!2;UBERON:0001744!4.51e-10!2;UBERON:0001242!2.54e-08!13;UBERON:0000060!2.54e-08!13;UBERON:0001262!2.54e-08!13;UBERON:0004786!2.54e-08!13;UBERON:0004923!2.65e-08!24;UBERON:0003350!5.10e-08!9;UBERON:0004808!5.10e-08!9;UBERON:0001277!5.10e-08!9;UBERON:0002465!5.58e-07!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.01e-21,15;UBERON:0001962,6.53e-15,2;UBERON:0001961,6.53e-15,2;UBERON:0001744,6.53e-15,2;UBERON:0004923,2.03e-13,24;UBERON:0001242,5.75e-13,13;UBERON:0001262,5.75e-13,13;UBERON:0004786,5.75e-13,13;UBERON:0003350,2.83e-12,9;UBERON:0004808,2.83e-12,9;UBERON:0001277,2.83e-12,9;UBERON:0002465,2.97e-10,3;UBERON:0000485,4.30e-10,11;UBERON:0003199,1.84e-08,1 | |||
|phase1_expression=0,4.18770489167233,1.81999695755814,0,0,1.17515490338323,3.27057696833736,1.29123323441576,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,3.03985603307473,4.35877634027623,5.16808767703518,3.87685796543167,4.30942465371778,0,0,2.66076612786366,0,0,0,0,0,0,0.418531630736908,1.5626706890476,0.523523743973798,0.588231488031014,1.36609096991689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,4.18770489167233,1.81999695755814,0,0,1.17515490338323,3.27057696833736,1.29123323441576,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,3.03985603307473,4.35877634027623,5.16808767703518,3.87685796543167,4.30942465371778,0,0,2.66076612786366,0,0,0,0,0,0,0.418531630736908,1.5626706890476,0.523523743973798,0.588231488031014,1.36609096991689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:38971273..38971281,+ | |short_description=p@chr7:38971273..38971281,+ | ||
}} | }} |
Latest revision as of 03:51, 5 August 2015
Short description: | p@chr7:38971273..38971281, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:38971273..38971281, + |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 8.04e-22 | 3 |
brush border epithelial cell | 3.01e-18 | 6 |
gut absorptive cell | 3.01e-18 | 6 |
enterocyte | 3.01e-18 | 6 |
columnar/cuboidal epithelial cell | 1.08e-15 | 7 |
epithelial cell | 5.19e-13 | 25 |
intestinal epithelial cell | 2.83e-12 | 9 |
epithelial cell of alimentary canal | 2.83e-12 | 9 |
defensive cell | 1.07e-09 | 7 |
regulatory T cell | 8.96e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 8.96e-08 | 1 |
endo-epithelial cell | 1.84e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.01e-21 | 15 |
gut-associated lymphoid tissue | 6.53e-15 | 2 |
mucosa-associated lymphoid tissue | 6.53e-15 | 2 |
lymphoid tissue | 6.53e-15 | 2 |
organ component layer | 2.03e-13 | 24 |
intestinal mucosa | 5.75e-13 | 13 |
wall of intestine | 5.75e-13 | 13 |
gastrointestinal system mucosa | 5.75e-13 | 13 |
epithelium of mucosa | 2.83e-12 | 9 |
gastrointestinal system epithelium | 2.83e-12 | 9 |
intestinal epithelium | 2.83e-12 | 9 |
lymphoid system | 2.97e-10 | 3 |
simple columnar epithelium | 4.30e-10 | 11 |
egg chamber | 1.84e-08 | 1 |