FFCP PHASE1:Mm9::chr12:59313257..59313273,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:59313257..59313273,+|id=chr12:59313257..59313273,+|ontology_enrichment_celltype=CL:0000117!3.91e-21!23;CL:0000337!3.91e-21!23;CL:0000540!6.13e-15!33;CL:0000047!6.13e-15!33;CL:0000031!6.13e-15!33;CL:0000404!6.13e-15!33;CL:0000393!2.01e-11!39;CL:0000211!2.01e-11!39;CL:0002319!1.17e-09!43;CL:0000221!2.85e-09!44;CL:0000133!2.85e-09!44;CL:0000055!2.63e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,6.19e-23,23;CL:0000337,6.19e-23,23;CL:0000540,5.56e-15,33;CL:0000047,5.56e-15,33;CL:0000031,5.56e-15,33;CL:0000404,5.56e-15,33;CL:0000393,3.57e-12,39;CL:0000211,3.57e-12,39;CL:0002319,9.69e-11,43;CL:0000221,2.01e-10,44;CL:0000133,2.01e-10,44;CL:0002614,6.06e-09,3;CL:0002610,6.44e-09,3;CL:0002612,2.16e-08,3;CL:0000120,7.79e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.59e-34!52;UBERON:0005068!3.59e-34!52;UBERON:0006241!3.59e-34!52;UBERON:0007135!3.59e-34!52;UBERON:0001017!2.07e-33!73;UBERON:0005743!2.07e-33!73;UBERON:0000073!4.81e-32!75;UBERON:0001016!4.81e-32!75;UBERON:0000955!6.96e-32!50;UBERON:0006238!6.96e-32!50;UBERON:0002616!4.96e-31!49;UBERON:0002020!1.93e-28!34;UBERON:0003080!4.84e-28!40;UBERON:0002780!7.12e-27!39;UBERON:0001890!7.12e-27!39;UBERON:0006240!7.12e-27!39;UBERON:0002791!6.94e-23!29;UBERON:0003528!6.94e-23!29;UBERON:0001893!6.94e-23!29;UBERON:0000033!2.55e-22!63;UBERON:0002346!3.79e-22!71;UBERON:0003075!3.79e-22!71;UBERON:0007284!3.79e-22!71;UBERON:0003056!1.21e-20!49;UBERON:0004121!8.82e-20!102;UBERON:0000924!8.82e-20!102;UBERON:0006601!8.82e-20!102;UBERON:0000956!1.68e-17!21;UBERON:0001869!1.68e-17!21;UBERON:0000203!1.68e-17!21;UBERON:0002619!1.69e-14!17;UBERON:0000153!1.55e-13!94;UBERON:0007811!1.81e-13!86;UBERON:0002021!2.16e-12!10;UBERON:0000411!2.16e-12!10;UBERON:0001950!2.16e-12!10;UBERON:0000025!5.69e-08!114;UBERON:0002240!1.40e-07!6;UBERON:0005174!1.40e-07!6;UBERON:0001137!1.40e-07!6;UBERON:0002298!1.91e-07!6;UBERON:0001948!9.09e-07!5;UBERON:0002315!9.09e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.31e-40,54;UBERON:0002020,1.13e-37,34;UBERON:0001017,1.75e-34,73;UBERON:0001016,2.11e-33,75;UBERON:0001049,9.23e-33,52;UBERON:0005068,9.23e-33,52;UBERON:0006241,9.23e-33,52;UBERON:0007135,9.23e-33,52;UBERON:0003080,2.67e-28,40;UBERON:0003528,1.03e-26,29;UBERON:0002791,1.03e-26,29;UBERON:0001893,1.03e-26,29;UBERON:0002780,3.05e-26,39;UBERON:0001890,3.05e-26,39;UBERON:0006240,3.05e-26,39;UBERON:0002021,4.79e-26,10;UBERON:0000411,4.79e-26,10;UBERON:0001950,4.79e-26,10;UBERON:0002346,1.49e-25,64;UBERON:0003075,1.49e-25,64;UBERON:0007284,1.49e-25,64;UBERON:0004121,4.46e-25,95;UBERON:0000924,4.46e-25,95;UBERON:0006601,4.46e-25,95;UBERON:0002619,1.02e-24,17;UBERON:0002616,5.77e-24,46;UBERON:0000955,2.37e-23,47;UBERON:0006238,2.37e-23,47;UBERON:0000956,1.09e-22,21;UBERON:0001869,1.09e-22,21;UBERON:0000203,1.09e-22,21;UBERON:0003056,3.39e-22,49;UBERON:0010371,1.07e-21,73;UBERON:0010314,4.99e-16,92;UBERON:0001948,2.45e-13,5;UBERON:0002315,2.45e-13,5;UBERON:0000025,8.05e-12,114;UBERON:0002950,1.91e-11,4;UBERON:0001891,1.91e-11,4;UBERON:0009616,1.91e-11,4;UBERON:0010286,1.91e-11,4;UBERON:0002240,4.58e-11,6;UBERON:0005174,4.58e-11,6;UBERON:0001137,4.58e-11,6;UBERON:0004111,1.15e-10,122;UBERON:0011216,4.96e-09,194;UBERON:0002038,6.06e-09,3;UBERON:0009663,6.06e-09,3;UBERON:0009661,6.06e-09,3;UBERON:0000125,6.06e-09,3;UBERON:0002308,6.06e-09,3;UBERON:0004684,6.44e-09,3;UBERON:0002275,6.44e-09,3;UBERON:0002257,2.16e-08,3|phase1_expression=0,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,0.207379224616955,0.540023753326763,0.210324961351382,1.99955689082663,2.87129103237098,0.734944795289724,0.383381884072945,1.83843757322004,4.40463523997555,1.78762273319263,1.38245879930619,0.923204014111357,0.548925861614458,0,2.23346399201105,1.68828783009504,3.20876320331301,3.83017161115768,1.28134512719193,1.3047961207771,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,2.54644086988199,1.37250180845588,0.125654352112864,1.73824320192276,2.81287003063364,2.0778804455956,1.29793010454206,0,0,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0.189106080167819,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36463917702604,1.23485534855141,0,0,0,0,0,0,0.22237804384487,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.820481806145422,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,1.70219802876894,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0.119372344003136,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,5.9842280745933,4.01026859407578,6.35856774671644,1.37016503954128,2.2661816921691,1.35004500046361,1.35096360967266,3.17199686288943,1.03552062350364,0,0,0,0,0,0.367687016900028,0,0.206035057238894,0,0,0.25347929989024,0,0.280924522409647,0.192075457214608,0.287177344778066,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.169229215783353,0,0.263069711437843,0.271608227691724,0,0,0,0.409231043169689,0.154936841185966,0,0,0,0.214871054048298,0.382576664137687,0.220591419119515,0|short_description=p@chr12:59313257..59313273,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:59313257..59313273,+ | |||
|description=CAGE_peak_at_chr12:59313257..59313273,+ | |||
|id=chr12:59313257..59313273,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.91e-21!23;CL:0000337!3.91e-21!23;CL:0000540!6.13e-15!33;CL:0000047!6.13e-15!33;CL:0000031!6.13e-15!33;CL:0000404!6.13e-15!33;CL:0000393!2.01e-11!39;CL:0000211!2.01e-11!39;CL:0002319!1.17e-09!43;CL:0000221!2.85e-09!44;CL:0000133!2.85e-09!44;CL:0000055!2.63e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.19e-23,23;CL:0000337,6.19e-23,23;CL:0000540,5.56e-15,33;CL:0000047,5.56e-15,33;CL:0000031,5.56e-15,33;CL:0000404,5.56e-15,33;CL:0000393,3.57e-12,39;CL:0000211,3.57e-12,39;CL:0002319,9.69e-11,43;CL:0000221,2.01e-10,44;CL:0000133,2.01e-10,44;CL:0002614,6.06e-09,3;CL:0002610,6.44e-09,3;CL:0002612,2.16e-08,3;CL:0000120,7.79e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.59e-34!52;UBERON:0005068!3.59e-34!52;UBERON:0006241!3.59e-34!52;UBERON:0007135!3.59e-34!52;UBERON:0001017!2.07e-33!73;UBERON:0005743!2.07e-33!73;UBERON:0000073!4.81e-32!75;UBERON:0001016!4.81e-32!75;UBERON:0000955!6.96e-32!50;UBERON:0006238!6.96e-32!50;UBERON:0002616!4.96e-31!49;UBERON:0002020!1.93e-28!34;UBERON:0003080!4.84e-28!40;UBERON:0002780!7.12e-27!39;UBERON:0001890!7.12e-27!39;UBERON:0006240!7.12e-27!39;UBERON:0002791!6.94e-23!29;UBERON:0003528!6.94e-23!29;UBERON:0001893!6.94e-23!29;UBERON:0000033!2.55e-22!63;UBERON:0002346!3.79e-22!71;UBERON:0003075!3.79e-22!71;UBERON:0007284!3.79e-22!71;UBERON:0003056!1.21e-20!49;UBERON:0004121!8.82e-20!102;UBERON:0000924!8.82e-20!102;UBERON:0006601!8.82e-20!102;UBERON:0000956!1.68e-17!21;UBERON:0001869!1.68e-17!21;UBERON:0000203!1.68e-17!21;UBERON:0002619!1.69e-14!17;UBERON:0000153!1.55e-13!94;UBERON:0007811!1.81e-13!86;UBERON:0002021!2.16e-12!10;UBERON:0000411!2.16e-12!10;UBERON:0001950!2.16e-12!10;UBERON:0000025!5.69e-08!114;UBERON:0002240!1.40e-07!6;UBERON:0005174!1.40e-07!6;UBERON:0001137!1.40e-07!6;UBERON:0002298!1.91e-07!6;UBERON:0001948!9.09e-07!5;UBERON:0002315!9.09e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.31e-40,54;UBERON:0002020,1.13e-37,34;UBERON:0001017,1.75e-34,73;UBERON:0001016,2.11e-33,75;UBERON:0001049,9.23e-33,52;UBERON:0005068,9.23e-33,52;UBERON:0006241,9.23e-33,52;UBERON:0007135,9.23e-33,52;UBERON:0003080,2.67e-28,40;UBERON:0003528,1.03e-26,29;UBERON:0002791,1.03e-26,29;UBERON:0001893,1.03e-26,29;UBERON:0002780,3.05e-26,39;UBERON:0001890,3.05e-26,39;UBERON:0006240,3.05e-26,39;UBERON:0002021,4.79e-26,10;UBERON:0000411,4.79e-26,10;UBERON:0001950,4.79e-26,10;UBERON:0002346,1.49e-25,64;UBERON:0003075,1.49e-25,64;UBERON:0007284,1.49e-25,64;UBERON:0004121,4.46e-25,95;UBERON:0000924,4.46e-25,95;UBERON:0006601,4.46e-25,95;UBERON:0002619,1.02e-24,17;UBERON:0002616,5.77e-24,46;UBERON:0000955,2.37e-23,47;UBERON:0006238,2.37e-23,47;UBERON:0000956,1.09e-22,21;UBERON:0001869,1.09e-22,21;UBERON:0000203,1.09e-22,21;UBERON:0003056,3.39e-22,49;UBERON:0010371,1.07e-21,73;UBERON:0010314,4.99e-16,92;UBERON:0001948,2.45e-13,5;UBERON:0002315,2.45e-13,5;UBERON:0000025,8.05e-12,114;UBERON:0002950,1.91e-11,4;UBERON:0001891,1.91e-11,4;UBERON:0009616,1.91e-11,4;UBERON:0010286,1.91e-11,4;UBERON:0002240,4.58e-11,6;UBERON:0005174,4.58e-11,6;UBERON:0001137,4.58e-11,6;UBERON:0004111,1.15e-10,122;UBERON:0011216,4.96e-09,194;UBERON:0002038,6.06e-09,3;UBERON:0009663,6.06e-09,3;UBERON:0009661,6.06e-09,3;UBERON:0000125,6.06e-09,3;UBERON:0002308,6.06e-09,3;UBERON:0004684,6.44e-09,3;UBERON:0002275,6.44e-09,3;UBERON:0002257,2.16e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41621522601718,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,0.207379224616955,0.540023753326763,0.210324961351382,1.99955689082663,2.87129103237098,0.734944795289724,0.383381884072945,1.83843757322004,4.40463523997555,1.78762273319263,1.38245879930619,0.923204014111357,0.548925861614458,0,2.23346399201105,1.68828783009504,3.20876320331301,3.83017161115768,1.28134512719193,1.3047961207771,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,2.54644086988199,1.37250180845588,0.125654352112864,1.73824320192276,2.81287003063364,2.0778804455956,1.29793010454206,0,0,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0.189106080167819,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36463917702604,1.23485534855141,0,0,0,0,0,0,0.22237804384487,0,0.474529061544512,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.820481806145422,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,1.70219802876894,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0.119372344003136,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,5.9842280745933,4.01026859407578,6.35856774671644,1.37016503954128,2.2661816921691,1.35004500046361,1.35096360967266,3.17199686288943,1.03552062350364,0,0,0,0,0,0.367687016900028,0,0.206035057238894,0,0,0.25347929989024,0,0.280924522409647,0.192075457214608,0.287177344778066,0,0.115884325944855,0.192909220463705,0,0,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.169229215783353,0,0.263069711437843,0.271608227691724,0,0,0,0.409231043169689,0.154936841185966,0,0,0,0.214871054048298,0.382576664137687,0.220591419119515,0 | |||
|short_description=p@chr12:59313257..59313273,+ | |||
}} |
Latest revision as of 03:27, 5 August 2015
Short description: | p@chr12:59313257..59313273, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:59313257..59313273, + |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.19e-23 | 23 |
neuroblast (sensu Vertebrata) | 6.19e-23 | 23 |
neuron | 5.56e-15 | 33 |
neuronal stem cell | 5.56e-15 | 33 |
neuroblast | 5.56e-15 | 33 |
electrically signaling cell | 5.56e-15 | 33 |
electrically responsive cell | 3.57e-12 | 39 |
electrically active cell | 3.57e-12 | 39 |
neural cell | 9.69e-11 | 43 |
ectodermal cell | 2.01e-10 | 44 |
neurectodermal cell | 2.01e-10 | 44 |
neuron of the substantia nigra | 6.06e-09 | 3 |
raphe nuclei neuron | 6.44e-09 | 3 |
neuron of the ventral spinal cord | 2.16e-08 | 3 |
granule cell | 7.79e-08 | 3 |