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FFCP PHASE1:Mm9::chr9:40263366..40263397,-: Difference between revisions

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{{FFCP|EntrezGene=235283|HGNC=|MCL_coexpression_id=3|UniProt=Q80TI0|association_with_transcript=-17bp_to_ENSMUST00000045682,NM_172768,uc009ozq.1_5end|description=CAGE_peak_2_at_Gramd1b_5end|id=chr9:40263366..40263397,-|ontology_enrichment_celltype=CL:0000084!2.68e-08!11;CL:0000827!2.68e-08!11;CL:0000988!8.94e-08!32;CL:0002032!8.94e-08!32;CL:0000037!8.94e-08!32;CL:0000566!8.94e-08!32;CL:0000837!8.94e-08!32;CL:0000738!1.25e-07!17;CL:0002087!1.25e-07!17;CL:0000838!1.34e-07!12;CL:0000791!4.49e-07!9;CL:0000789!4.49e-07!9;CL:0002420!4.49e-07!9;CL:0002419!4.49e-07!9;CL:0000790!4.49e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,1.05e-10,32;CL:0002032,1.05e-10,32;CL:0000037,1.05e-10,32;CL:0000837,1.05e-10,32;CL:0000084,1.16e-09,11;CL:0000827,1.16e-09,11;CL:0000738,5.39e-09,17;CL:0002087,5.39e-09,17;CL:0000838,2.12e-08,12;CL:0000791,3.40e-08,9;CL:0000789,3.40e-08,9;CL:0002420,3.40e-08,9;CL:0002419,3.40e-08,9;CL:0000790,3.40e-08,9;CL:0002031,3.69e-08,25;CL:0002320,3.75e-08,46;CL:0000134,3.75e-08,46;CL:0000624,1.69e-07,8;CL:0000542,2.38e-07,13;CL:0000051,2.38e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.99e-12!48;UBERON:0002390!1.32e-11!45;UBERON:0003061!1.32e-11!45;UBERON:0002405!1.22e-09!70;UBERON:0003081!4.87e-07!88;UBERON:0004177!7.52e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.40e-15,48;UBERON:0002405,1.40e-15,48;UBERON:0002390,8.41e-15,45;UBERON:0003061,8.41e-15,45;UBERON:0000926,1.51e-10,120;UBERON:0004120,1.51e-10,120;UBERON:0006603,1.51e-10,120;UBERON:0000077,1.01e-08,35;UBERON:0004177,1.34e-08,29;UBERON:0005057,1.34e-08,29;UBERON:0002384,3.75e-08,46;UBERON:0002371,2.84e-07,16;UBERON:0003408,4.24e-07,24;UBERON:0001474,4.50e-07,22;UBERON:0004765,4.50e-07,22;UBERON:0001434,4.50e-07,22;UBERON:0003081,4.84e-07,87;UBERON:0002204,7.20e-07,32|phase1_expression=0.160148847104794,4.18770489167233,5.45999087267443,9.0739263392049,7.51343594919521,2.18243053485457,1.63528848416868,14.9783055192228,18.3025338797167,44.0041309485348,27.7373108525318,32.2279522341159,10.785645985666,14.5117868015536,2.6648780945253,1.41732687172878,0,2.68142840554502,2.87940310572051,4.66828616977833,1.78590909317247,12.4113689001107,13.5823890352246,1.11994695955385,1.60586496747019,1.72269589234506,3.01533397311352,3.23206849028834,1.14014051673824,1.76421090831952,2.43903561720835,0,0,0,0.577703239502549,0.498703936075477,0.816677425049476,62.7797446105362,34.3787551590472,48.6877081895632,68.2348526115977,58.7419117064263,62.6308355410188,0.377690453926732,0.405507724878058,0.367093504323363,1.56478268869608,0.218025156380447,0.219686182734472,0,0.419959264876088,0,0.671130424230945,10.8804321301702,11.7632829699862,0.257259436035947,1.43266719969378,1.54701627683233,0.202316460859598,0,0.633831403506179,0,0.889294796111139,11.2487464660175,14.8329954385046,7.8152812644071,3.29560121570245,2.68952813725088,0.518448061542388,0.405017814995072,0.420649922702764,0,0.220868540951614,0.244981598429908,0.0958454710182364,0,2.20231761998777,0,0,0.263772575460388,0,1.04182674111352,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0.372798891650601,0.530083353332288,0.529000920747499,4.92769630792852,1.72084775396277,0,0,0.649776417447669,0,1.96622188184453,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0.760079596425296,0,1.1418387971906,12.1700805314171,5.19547486726887,1.21439728736295,3.65358573974569,5.99600292865752,4.97384713823654,6.58496759959947,3.89566433121994,0,1.01219549843938,12.3845477272982,1.13236794963186,4.19598885074748,1.93950101254089,1.86391761218122,0.292780797011547,0.209446706813455,4.34276993854605,8.8663192134381,5.39912457894067,5.46401976414178,0.449371918214468,0.457500602818626,0,0.173824320192276,0,0.41557608911912,0.486723789203273,0.81471491080253,6.59356944233493,1.26361379216837,1.05220927943237,0.130120442962704,0,0,1.05493372485001,0.272145996605311,0.512454881139399,0.187403449119458,1.55222022443409,0,0,0.175951124163949,0.43839146485515,0.278047249225598,1.0447564995665,0.823128545631774,0,5.61770549850588,5.91900186363845,5.96743348730745,0.207125772535502,0.469052119962192,0.900310307305074,0.710234206755631,0.590292695242212,0.462801338662135,0.697601834251224,0,1.05088808130453,0.493679549740441,0.985004784474571,1.4592385718254,0.584799949701329,0.878200461164203,0.805238512562231,0.210289948564127,0.823236899034275,9.58214470653014,2.64450566663544,0,0,0.515469845288373,0.80673409849337,0.667134131534611,0.951128130562796,1.89811624617805,0.988193728344065,1.75934646160189,0.795825888164603,0.58489226135736,3.59527763461689,2.80979464837102,1.1948476395262,0,0.456994050438915,0,0.407302655690628,0.775809948670503,0.140271639780637,0.252946148497029,0.442830443938806,0.470996183524124,0.246794327843601,0.592905254174298,0.500535317148282,0.589676985339609,0.449724224769707,0.811440485554012,0.72353147925725,0.763877555344259,3.45235364940973,2.43202840162553,1.64736847912849,1.43768206527355,1.86070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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:235283
|HGNC=
|MCL_coexpression_id=3
|TSSclassifier=NA
|UniProt=uniprot:Q80TI0
|association_with_transcript=-17bp_to_ENSMUST00000045682,NM_172768,uc009ozq.1_5end
|cluster_id=chr9:40263366..40263397,-
|description=CAGE_peak_2_at_Gramd1b_5end
|id=chr9:40263366..40263397,-
|ontology_enrichment_celltype=CL:0000084!2.68e-08!11;CL:0000827!2.68e-08!11;CL:0000988!8.94e-08!32;CL:0002032!8.94e-08!32;CL:0000037!8.94e-08!32;CL:0000566!8.94e-08!32;CL:0000837!8.94e-08!32;CL:0000738!1.25e-07!17;CL:0002087!1.25e-07!17;CL:0000838!1.34e-07!12;CL:0000791!4.49e-07!9;CL:0000789!4.49e-07!9;CL:0002420!4.49e-07!9;CL:0002419!4.49e-07!9;CL:0000790!4.49e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000988,1.05e-10,32;CL:0002032,1.05e-10,32;CL:0000037,1.05e-10,32;CL:0000837,1.05e-10,32;CL:0000084,1.16e-09,11;CL:0000827,1.16e-09,11;CL:0000738,5.39e-09,17;CL:0002087,5.39e-09,17;CL:0000838,2.12e-08,12;CL:0000791,3.40e-08,9;CL:0000789,3.40e-08,9;CL:0002420,3.40e-08,9;CL:0002419,3.40e-08,9;CL:0000790,3.40e-08,9;CL:0002031,3.69e-08,25;CL:0002320,3.75e-08,46;CL:0000134,3.75e-08,46;CL:0000624,1.69e-07,8;CL:0000542,2.38e-07,13;CL:0000051,2.38e-07,13
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.40e-15,48;UBERON:0002405,1.40e-15,48;UBERON:0002390,8.41e-15,45;UBERON:0003061,8.41e-15,45;UBERON:0000926,1.51e-10,120;UBERON:0004120,1.51e-10,120;UBERON:0006603,1.51e-10,120;UBERON:0000077,1.01e-08,35;UBERON:0004177,1.34e-08,29;UBERON:0005057,1.34e-08,29;UBERON:0002384,3.75e-08,46;UBERON:0002371,2.84e-07,16;UBERON:0003408,4.24e-07,24;UBERON:0001474,4.50e-07,22;UBERON:0004765,4.50e-07,22;UBERON:0001434,4.50e-07,22;UBERON:0003081,4.84e-07,87;UBERON:0002204,7.20e-07,32
|phase1_expression=0.160148847104794,4.18770489167233,5.45999087267443,9.0739263392049,7.51343594919521,2.18243053485457,1.63528848416868,14.9783055192228,18.3025338797167,44.0041309485348,27.7373108525318,32.2279522341159,10.785645985666,14.5117868015536,2.6648780945253,1.41732687172878,0,2.68142840554502,2.87940310572051,4.66828616977833,1.78590909317247,12.4113689001107,13.5823890352246,1.11994695955385,1.60586496747019,1.72269589234506,3.01533397311352,3.23206849028834,1.14014051673824,1.76421090831952,2.43903561720835,0,0,0,0.577703239502549,0.498703936075477,0.816677425049476,62.7797446105362,34.3787551590472,48.6877081895632,68.2348526115977,58.7419117064263,62.6308355410188,0.377690453926732,0.405507724878058,0.367093504323363,1.56478268869608,0.218025156380447,0.219686182734472,0,0.419959264876088,0,0.671130424230945,10.8804321301702,11.7632829699862,0.257259436035947,1.43266719969378,1.54701627683233,0.202316460859598,0,0.633831403506179,0,0.889294796111139,11.2487464660175,14.8329954385046,7.8152812644071,3.29560121570245,2.68952813725088,0.518448061542388,0.405017814995072,0.420649922702764,0,0.220868540951614,0.244981598429908,0.0958454710182364,0,2.20231761998777,0,0,0.263772575460388,0,1.04182674111352,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0.372798891650601,0.530083353332288,0.529000920747499,4.92769630792852,1.72084775396277,0,0,0.649776417447669,0,1.96622188184453,0,0,0,0.422530259330042,0,0,0,0.216491041011214,0.760079596425296,0,1.1418387971906,12.1700805314171,5.19547486726887,1.21439728736295,3.65358573974569,5.99600292865752,4.97384713823654,6.58496759959947,3.89566433121994,0,1.01219549843938,12.3845477272982,1.13236794963186,4.19598885074748,1.93950101254089,1.86391761218122,0.292780797011547,0.209446706813455,4.34276993854605,8.8663192134381,5.39912457894067,5.46401976414178,0.449371918214468,0.457500602818626,0,0.173824320192276,0,0.41557608911912,0.486723789203273,0.81471491080253,6.59356944233493,1.26361379216837,1.05220927943237,0.130120442962704,0,0,1.05493372485001,0.272145996605311,0.512454881139399,0.187403449119458,1.55222022443409,0,0,0.175951124163949,0.43839146485515,0.278047249225598,1.0447564995665,0.823128545631774,0,5.61770549850588,5.91900186363845,5.96743348730745,0.207125772535502,0.469052119962192,0.900310307305074,0.710234206755631,0.590292695242212,0.462801338662135,0.697601834251224,0,1.05088808130453,0.493679549740441,0.985004784474571,1.4592385718254,0.584799949701329,0.878200461164203,0.805238512562231,0.210289948564127,0.823236899034275,9.58214470653014,2.64450566663544,0,0,0.515469845288373,0.80673409849337,0.667134131534611,0.951128130562796,1.89811624617805,0.988193728344065,1.75934646160189,0.795825888164603,0.58489226135736,3.59527763461689,2.80979464837102,1.1948476395262,0,0.456994050438915,0,0.407302655690628,0.775809948670503,0.140271639780637,0.252946148497029,0.442830443938806,0.470996183524124,0.246794327843601,0.592905254174298,0.500535317148282,0.589676985339609,0.449724224769707,0.811440485554012,0.72353147925725,0.763877555344259,3.45235364940973,2.43202840162553,1.64736847912849,1.43768206527355,1.86070473834252,1.5601883655728,1.26289438973556,1.4351793081753,0.482443521363367,4.80358294433172,0.189491411770485,0.162964976442026,0.509235257325564,1.17345124144251,1.34005005953453,1.42826184531608,1.75620283072019,1.57635144106191,2.21464689648775,0.956728611944923,1.14704320301017,3.45369963731791,1.88043776155965,12.0633027151418,2.17562273527484,8.85175691434265,1.37968373152366,0,0.234423373184406,0,1.00988370881749,0.315508219416257,0,0.215423397732799,0.477937595905104,0.222798674082394,0.283076530788832,0.809621403349789,0,1.18586333383957,0.963963949265421,6.81312408999689,0,0.651547837414304,3.62934270539578,0,0,0,0,0.295301892880773,0,0.775284879504663,2.18120237686503,1.06949213515416,0,1.05418608574999,0,0.340439605753788,0.540183282093931,0.129358683782755,0.857348140126369,0.532020700926821,0.356737635204141,0.493647061806363,0.608929898229199,2.81606049676452,0.847328283455281,3.96951116498931,2.14352128823924,0.968786560175433,0.663442174209714,0.477489376012546,0.164140899745061,1.7488850197791,0.370850604021019,4.44264290074417,2.06386867963222,2.96311243791539,3.01389531207506,2.05041341581538,2.97411625168479,9.85874893964361,5.59805809294632,7.04819866402561,1.90934123603023,0.316335993581135,0.203319467126849,0.648032044930808,0.418176592028937,0.218362563746178,1.21377911746339,0.578574190077352,1.57053565190418,2.07383957266869,9.32008969630389,0.56369293868419,0.897099276263873,1.48912641411388,1.36115831840833,1.29159823477731,1.85851738039856,2.22978753426933,1.3020438484395,0.734015410979976,0.241584120826006,0.576060012515731,4.4241556887945,1.62180172232131,0.924398614483445,1.94881234466693,1.9692936523423,1.78813219303138,3.00488623799922,1.62458479892035,3.12995994839258,2.28620419965,3.42809029465258,2.82627854145282,2.69393156592922,3.15567635890236,0.453460767230423,0,0.0897138566094757,0,0.579568782096571,3.00291960721891,2.74727436400898,1.2862102744744,6.01886524842436,1.6942555278512,0.460325236507177,0.572895513439397,0.343706364687375,0.685082519770642,0.755393897389701,0,1.35096360967266,0.906284817968409,1.55328093525546,0,0.399024873401031,0,0.729320151204882,0.209613162627982,0.367687016900028,0.222246727801615,1.44224540067226,0.64183841918363,0.758091635291392,1.01391719956096,1.13175804831646,0.842773567228942,1.28050304809739,1.09127391015665,0.952587382566147,1.0429589335037,0.77163688185482,1.23625770240992,1.17759136107518,0.342869252385415,1.24233064311536,0.715308569841963,1.30811774969096,0.658765662907314,0.930760686808441,0.914639864363863,0.526139422875686,0.950628796921032,1.68342681497322,0.711810108745045,0.985044823755635,0.409231043169689,1.08455788830176,0.964533054905707,0.999242311751784,0.935726433781634,0.859484216193193,0.382576664137687,0,0.695603506861264
|short_description=p2@Gramd1b
}}

Revision as of 02:08, 5 August 2015

Short description:p2@Gramd1b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Gramd1b_5end
Coexpression cluster:MCL_coexpression_mm9:3
Association with transcript: -17bp_to_ENSMUST00000045682, NM_172768, uc009ozq.1_5end
EntrezGene:235283
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Gramd1b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.07
CD326+ enterocyte, pool2.CNhs13197.11849-124I47.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E914.98
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E718.30
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F244.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E627.74
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F132.23
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E410.79
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E814.51
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.42
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.68
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.88
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.67
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H212.41
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I913.58
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I23.23
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G862.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H134.38
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H348.69
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G968.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H258.74
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H462.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.88
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A111.76
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C711.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E714.83
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.82
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H912.17
adrenal gland, adult.CNhs10508.49-24D75.20
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D63.65
adrenal gland, embryo E17.CNhs11043.1263-45I16.00
adrenal gland, embryo E18.CNhs11026.1262-18F54.97
adrenal gland, neonate N00.CNhs11191.1311-23C16.58
adrenal gland, neonate N25.CNhs11223.1377-27I33.90
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G212.38
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A64.20
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H74.34
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C78.87
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D15.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.46
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.59
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C85.62
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.92
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.97
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G11.46
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.82
intestinal mucosa, adult.CNhs10506.860-29I39.58
intestine, adult.CNhs10496.178-9A32.64
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E32.81
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F42.43
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B14.80
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C61.76
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C73.45
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A112.06
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B68.85
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I76.81
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G63.63
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I72.82
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F83.97
skin, adult.CNhs10492.30-1C32.14
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.66
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G24.44
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F22.96
spleen, neonate N10.CNhs11116.752-24D13.01
spleen, neonate N20.CNhs11112.824-19H12.05
spleen, neonate N25.CNhs11099.1354-25G32.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C69.86
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D37.05
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I12.07
submandibular gland, adult.CNhs10469.59-29C19.32
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G51.86
testis, neonate N00.CNhs11189.1300-22B72.23
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B54.42
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C51.95
thymus, embryo E17.CNhs10581.478-18C11.97
thymus, embryo E18.CNhs10595.1273-19G41.79
thymus, neonate N02.CNhs11181.1541-43F83.00
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C43.13
thymus, neonate N07.CNhs11211.713-19D32.29
thymus, neonate N10.CNhs11194.748-24E43.43
thymus, neonate N20.CNhs11186.820-7A22.83
thymus, neonate N25.CNhs11125.1362-25G72.69
thymus, neonate N30.CNhs11132.1393-42G23.16
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F53.00
uterus, adult.CNhs10509.92-27E52.75
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F86.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.70





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemolymphoid system1.40e-1548
immune system1.40e-1548
hematopoietic system8.41e-1545
blood island8.41e-1545
mesoderm1.51e-10120
mesoderm-derived structure1.51e-10120
presumptive mesoderm1.51e-10120
mixed endoderm/mesoderm-derived structure1.01e-0835
hemopoietic organ1.34e-0829
immune organ1.34e-0829
connective tissue3.75e-0846
bone marrow2.84e-0716
gland of gut4.24e-0724
bone element4.50e-0722
skeletal element4.50e-0722
skeletal system4.50e-0722
lateral plate mesoderm4.84e-0787
musculoskeletal system7.20e-0732
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