FFCP PHASE1:Mm9::chr12:52235977..52235978,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:52235977..52235978,- | |||
|description=CAGE_peak_at_chr12:52235977..52235978,- | |description=CAGE_peak_at_chr12:52235977..52235978,- | ||
|id=chr12:52235977..52235978,- | |id=chr12:52235977..52235978,- | ||
|ontology_enrichment_celltype=CL:0000117!7.40e-12!23;CL:0000337!7.40e-12!23;CL:0000221!4.49e-10!44;CL:0000133!4.49e-10!44;CL:0002319!5.87e-10!43;CL:0000540!3.35e-09!33;CL:0000047!3.35e-09!33;CL:0000031!3.35e-09!33;CL:0000404!3.35e-09!33;CL:0000055!3.42e-09!50;CL:0000393!9.86e-09!39;CL:0000211!9.86e-09!39 | |ontology_enrichment_celltype=CL:0000117!7.40e-12!23;CL:0000337!7.40e-12!23;CL:0000221!4.49e-10!44;CL:0000133!4.49e-10!44;CL:0002319!5.87e-10!43;CL:0000540!3.35e-09!33;CL:0000047!3.35e-09!33;CL:0000031!3.35e-09!33;CL:0000404!3.35e-09!33;CL:0000055!3.42e-09!50;CL:0000393!9.86e-09!39;CL:0000211!9.86e-09!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.08e-18,23;CL:0000337,1.08e-18,23;CL:0000120,4.88e-18,3;CL:0000540,1.04e-12,33;CL:0000047,1.04e-12,33;CL:0000031,1.04e-12,33;CL:0000404,1.04e-12,33;CL:0000393,1.38e-10,39;CL:0000211,1.38e-10,39;CL:0002319,1.69e-09,43;CL:0000221,2.95e-09,44;CL:0000133,2.95e-09,44;CL:0002613,1.69e-08,3;CL:0002612,5.92e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.10e-16!102;UBERON:0000924!4.10e-16!102;UBERON:0006601!4.10e-16!102;UBERON:0000073!2.50e-15!75;UBERON:0001016!2.50e-15!75;UBERON:0001017!7.21e-15!73;UBERON:0005743!7.21e-15!73;UBERON:0002020!1.80e-14!34;UBERON:0002346!3.24e-14!71;UBERON:0003075!3.24e-14!71;UBERON:0007284!3.24e-14!71;UBERON:0001049!4.76e-13!52;UBERON:0005068!4.76e-13!52;UBERON:0006241!4.76e-13!52;UBERON:0007135!4.76e-13!52;UBERON:0003056!2.72e-12!49;UBERON:0000033!3.14e-11!63;UBERON:0002791!7.46e-11!29;UBERON:0003528!7.46e-11!29;UBERON:0001893!7.46e-11!29;UBERON:0003080!8.74e-11!40;UBERON:0002780!1.13e-10!39;UBERON:0001890!1.13e-10!39;UBERON:0006240!1.13e-10!39;UBERON:0000956!6.97e-10!21;UBERON:0001869!6.97e-10!21;UBERON:0000203!6.97e-10!21;UBERON:0000955!7.80e-10!50;UBERON:0006238!7.80e-10!50;UBERON:0002616!1.82e-09!49;UBERON:0002619!1.87e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.53e-12,34;UBERON:0001017,4.20e-11,73;UBERON:0001016,9.24e-11,75;UBERON:0001948,2.16e-10,5;UBERON:0002315,2.16e-10,5;UBERON:0001049,3.36e-09,52;UBERON:0005068,3.36e-09,52;UBERON:0006241,3.36e-09,52;UBERON:0007135,3.36e-09,52;UBERON:0000073,8.22e-09,54;UBERON:0002240,9.52e-09,6;UBERON:0005174,9.52e-09,6;UBERON:0001137,9.52e-09,6;UBERON:0004121,4.06e-08,95;UBERON:0000924,4.06e-08,95;UBERON:0006601,4.06e-08,95;UBERON:0002257,5.92e-08,3;UBERON:0002346,3.14e-07,64;UBERON:0003075,3.14e-07,64;UBERON:0007284,3.14e-07,64;UBERON:0001153,3.59e-07,1;UBERON:0001045,3.59e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0.0874204024189974,0,0.202475267389826,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.405507724878058,0.734187008646726,0,0.436050312760893,0,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,1.41621522601718,4.7609188134483,2.53532561402472,0,0,0,0,0,0.299600110518405,0.768436610643109,0.725827286159344,0.810035629990144,0.841299845405528,0.571301968807607,1.76694832761291,1.22490799214954,0.958454710182364,0.919218786610021,0,0.127687338085188,0.153606533256243,1.71452174049252,1.64677758484337,0.52091337055676,0,0.56276261003168,0,1.17851434189467,0.996601765593721,1.1183966749518,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0,0.681721290312231,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0,0,0,0.520455980298408,0.608930956624282,0.230615497256059,0,0.117588707135705,0,0,0.289198713839823,0,0,0.220841518460394,0.484875253135222,1.86391761218122,0,0,0,0.11981512450592,0,0,0.149790639404823,0,0.502617408451458,0.347648640384553,0,0.20778804455956,0.324482526135515,0,0,0,0,0.390361328888111,0.229902104433473,0.180062129805349,0.150704817835715,0.272145996605311,0.12811372028485,0.0937017245597288,0.517406741478031,0,0.189106080167819,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0.938104239924385,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,1.02904612379284,0,0,0,0,0.257734922644187,0,0,0.190225626112559,0,0.329397909448022,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0.238043640886014,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,0,0.468846746368813,0,0,0,0.390438744296638,0,0.238968797952552,0.222798674082394,0,0,0.584511715822624,0,0.321321316421807,0,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0,0.356737635204141,0.164549020602121,1.2178597964584,0,0.21183207086382,0,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,0.18542530201051,0,0,0,0,0.136694227721025,0,0,0,0.276399947608848,0,0,0,0.108005340821801,0,0,0.134864346384821,0.330613822901344,0,0,0.621339313086926,0.56369293868419,0,0.165458490457098,0,0,0.168956125490778,0,0,0,0,0.288030006257865,0.316011120628178,0,0,0,0,0,0.240390899039938,0,0,0,0,0,0,0,0,0,0,0,0,0.375364950902364,0,0,0,1.12950368523413,0.460325236507177,0.572895513439397,0.515559547031063,1.37016503954128,0.755393897389701,0,0.45032120322422,0.453142408984205,0,0.726511433089237,0,0.341467211508268,0,0.628839487883947,0.367687016900028,0,0.412070114477788,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0.0936415074698824,0.192075457214608,0.17230640686684,0,0.115884325944855,0,0.412085900803307,0.441596760403192,1.71434626192708,0.70990322463735,0,0.436039249896986,0.282328141245992,0.0846146078916765,0,0.789209134313529,0,1.68342681497322,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.192906610981141,0.249810577937946,0,0.429742108096597,0.191288332068843,0.441182838239031,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0.0874204024189974,0,0.202475267389826,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.405507724878058,0.734187008646726,0,0.436050312760893,0,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,1.41621522601718,4.7609188134483,2.53532561402472,0,0,0,0,0,0.299600110518405,0.768436610643109,0.725827286159344,0.810035629990144,0.841299845405528,0.571301968807607,1.76694832761291,1.22490799214954,0.958454710182364,0.919218786610021,0,0.127687338085188,0.153606533256243,1.71452174049252,1.64677758484337,0.52091337055676,0,0.56276261003168,0,1.17851434189467,0.996601765593721,1.1183966749518,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0,0.681721290312231,0,0.35333957451034,0.14084341977668,0,0,0,0,0,0,0,0,0,0.520455980298408,0.608930956624282,0.230615497256059,0,0.117588707135705,0,0,0.289198713839823,0,0,0.220841518460394,0.484875253135222,1.86391761218122,0,0,0,0.11981512450592,0,0,0.149790639404823,0,0.502617408451458,0.347648640384553,0,0.20778804455956,0.324482526135515,0,0,0,0,0.390361328888111,0.229902104433473,0.180062129805349,0.150704817835715,0.272145996605311,0.12811372028485,0.0937017245597288,0.517406741478031,0,0.189106080167819,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0.938104239924385,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,1.02904612379284,0,0,0,0,0.257734922644187,0,0,0.190225626112559,0,0.329397909448022,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0.238043640886014,0,0.157635144106191,0.221464689648775,0,0,0,0,0,0,0,0,0,0.468846746368813,0,0,0,0.390438744296638,0,0.238968797952552,0.222798674082394,0,0,0.584511715822624,0,0.321321316421807,0,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0,0.356737635204141,0.164549020602121,1.2178597964584,0,0.21183207086382,0,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,0.18542530201051,0,0,0,0,0.136694227721025,0,0,0,0.276399947608848,0,0,0,0.108005340821801,0,0,0.134864346384821,0.330613822901344,0,0,0.621339313086926,0.56369293868419,0,0.165458490457098,0,0,0.168956125490778,0,0,0,0,0.288030006257865,0.316011120628178,0,0,0,0,0,0.240390899039938,0,0,0,0,0,0,0,0,0,0,0,0,0.375364950902364,0,0,0,1.12950368523413,0.460325236507177,0.572895513439397,0.515559547031063,1.37016503954128,0.755393897389701,0,0.45032120322422,0.453142408984205,0,0.726511433089237,0,0.341467211508268,0,0.628839487883947,0.367687016900028,0,0.412070114477788,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0.0936415074698824,0.192075457214608,0.17230640686684,0,0.115884325944855,0,0.412085900803307,0.441596760403192,1.71434626192708,0.70990322463735,0,0.436039249896986,0.282328141245992,0.0846146078916765,0,0.789209134313529,0,1.68342681497322,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.192906610981141,0.249810577937946,0,0.429742108096597,0.191288332068843,0.441182838239031,0 | ||
|short_description=p@chr12:52235977..52235978,- | |short_description=p@chr12:52235977..52235978,- | ||
}} | }} |
Latest revision as of 02:06, 5 August 2015
Short description: | p@chr12:52235977..52235978, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:52235977..52235978, - |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.08e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.08e-18 | 23 |
granule cell | 4.88e-18 | 3 |
neuron | 1.04e-12 | 33 |
neuronal stem cell | 1.04e-12 | 33 |
neuroblast | 1.04e-12 | 33 |
electrically signaling cell | 1.04e-12 | 33 |
electrically responsive cell | 1.38e-10 | 39 |
electrically active cell | 1.38e-10 | 39 |
neural cell | 1.69e-09 | 43 |
ectodermal cell | 2.95e-09 | 44 |
neurectodermal cell | 2.95e-09 | 44 |
striatum neuron | 1.69e-08 | 3 |
neuron of the ventral spinal cord | 5.92e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
gray matter | 6.53e-12 | 34 |
central nervous system | 4.20e-11 | 73 |
nervous system | 9.24e-11 | 75 |
regional part of spinal cord | 2.16e-10 | 5 |
gray matter of spinal cord | 2.16e-10 | 5 |
neural tube | 3.36e-09 | 52 |
neural rod | 3.36e-09 | 52 |
future spinal cord | 3.36e-09 | 52 |
neural keel | 3.36e-09 | 52 |
regional part of nervous system | 8.22e-09 | 54 |
spinal cord | 9.52e-09 | 6 |
dorsal region element | 9.52e-09 | 6 |
dorsum | 9.52e-09 | 6 |
ectoderm-derived structure | 4.06e-08 | 95 |
ectoderm | 4.06e-08 | 95 |
presumptive ectoderm | 4.06e-08 | 95 |
ventral horn of spinal cord | 5.92e-08 | 3 |
neurectoderm | 3.14e-07 | 64 |
neural plate | 3.14e-07 | 64 |
presumptive neural plate | 3.14e-07 | 64 |
caecum | 3.59e-07 | 1 |
midgut | 3.59e-07 | 1 |