FFCP PHASE1:Mm9::chr9:40200008..40200018,-: Difference between revisions
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{{FFCP|EntrezGene=235283|HGNC=|MCL_coexpression_id=20|UniProt=|association_with_transcript=2bp_to_ENSMUST00000153029_5end|description=CAGE_peak_22_at_Gramd1b_5end|id=chr9:40200008..40200018,-|ontology_enrichment_celltype=CL:0002319!9.82e-11!43;CL:0000221!2.93e-10!44;CL:0000133!2.93e-10!44;CL:0000117!2.09e-08!23;CL:0000337!2.09e-08!23;CL:0000055!7.23e-08!50;CL:0000540!7.90e-08!33;CL:0000047!7.90e-08!33;CL:0000031!7.90e-08!33;CL:0000404!7.90e-08!33|ontology_enrichment_celltype_v019_2=CL:0002614,1.84e-11,3;CL:0002610,3.19e-11,3;CL:0000117,1.54e-08,23;CL:0000337,1.54e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.92e-29!75;UBERON:0001016!1.92e-29!75;UBERON:0001017!5.23e-28!73;UBERON:0005743!5.23e-28!73;UBERON:0004121!6.23e-25!102;UBERON:0000924!6.23e-25!102;UBERON:0006601!6.23e-25!102;UBERON:0001049!1.18e-21!52;UBERON:0005068!1.18e-21!52;UBERON:0006241!1.18e-21!52;UBERON:0007135!1.18e-21!52;UBERON:0000955!1.27e-20!50;UBERON:0006238!1.27e-20!50;UBERON:0000033!3.81e-20!63;UBERON:0002616!7.70e-20!49;UBERON:0002346!9.08e-20!71;UBERON:0003075!9.08e-20!71;UBERON:0007284!9.08e-20!71;UBERON:0003056!4.19e-15!49;UBERON:0003080!5.71e-14!40;UBERON:0002020!6.98e-14!34;UBERON:0002780!3.69e-13!39;UBERON:0001890!3.69e-13!39;UBERON:0006240!3.69e-13!39;UBERON:0007811!3.98e-11!86;UBERON:0002791!1.31e-10!29;UBERON:0003528!1.31e-10!29;UBERON:0001893!1.31e-10!29;UBERON:0000153!3.32e-10!94;UBERON:0003076!8.93e-09!12;UBERON:0003057!8.93e-09!12;UBERON:0002021!7.15e-08!10;UBERON:0000411!7.15e-08!10;UBERON:0001950!7.15e-08!10;UBERON:0002619!7.18e-08!17;UBERON:0002298!2.47e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.28e-29,54;UBERON:0001017,1.03e-24,73;UBERON:0001049,1.10e-24,52;UBERON:0005068,1.10e-24,52;UBERON:0006241,1.10e-24,52;UBERON:0007135,1.10e-24,52;UBERON:0001016,6.17e-24,75;UBERON:0002346,1.82e-21,64;UBERON:0003075,1.82e-21,64;UBERON:0007284,1.82e-21,64;UBERON:0002616,3.23e-20,46;UBERON:0004121,9.25e-20,95;UBERON:0000924,9.25e-20,95;UBERON:0006601,9.25e-20,95;UBERON:0000955,1.03e-19,47;UBERON:0006238,1.03e-19,47;UBERON:0002021,1.07e-19,10;UBERON:0000411,1.07e-19,10;UBERON:0001950,1.07e-19,10;UBERON:0002020,4.39e-19,34;UBERON:0010371,2.62e-18,73;UBERON:0003528,5.48e-17,29;UBERON:0002791,5.48e-17,29;UBERON:0001893,5.48e-17,29;UBERON:0003080,7.76e-16,40;UBERON:0002950,1.43e-14,4;UBERON:0001891,1.43e-14,4;UBERON:0009616,1.43e-14,4;UBERON:0010286,1.43e-14,4;UBERON:0003056,2.67e-14,49;UBERON:0002619,4.76e-14,17;UBERON:0002780,5.20e-14,39;UBERON:0001890,5.20e-14,39;UBERON:0006240,5.20e-14,39;UBERON:0010314,1.17e-13,92;UBERON:0002038,1.84e-11,3;UBERON:0009663,1.84e-11,3;UBERON:0009661,1.84e-11,3;UBERON:0000125,1.84e-11,3;UBERON:0002308,1.84e-11,3;UBERON:0004684,3.19e-11,3;UBERON:0002275,3.19e-11,3;UBERON:0000956,4.23e-11,21;UBERON:0001869,4.23e-11,21;UBERON:0000203,4.23e-11,21;UBERON:0003076,7.40e-10,12;UBERON:0003057,7.40e-10,12;UBERON:0000025,4.84e-09,114;UBERON:0001896,2.03e-08,2;UBERON:0002298,2.03e-08,2;UBERON:0005290,2.03e-08,2;UBERON:0010096,2.03e-08,2;UBERON:0004111,3.54e-08,122;UBERON:0002420,2.74e-07,8;UBERON:0007245,2.74e-07,8;UBERON:0010009,2.74e-07,8;UBERON:0010011,2.74e-07,8;UBERON:0000454,2.74e-07,8|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0.633831403506179,0,0,0,0,0,0.599200221036809,1.15265491596466,0,0,0,1.42825492201902,0.220868540951614,0.122490799214954,0,0,3.30347642998166,1.65993539510744,3.68655679814984,0.791317726381163,0.274462930807229,0,5.30447698102624,2.8138130501584,2.59757021220577,1.17851434189467,0.711858403995515,0.745597783301202,0.605809546665472,0.377857800533928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0.173485326766136,0,0,0,0.117588707135705,0,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,1.17112318804619,0.83778682725382,0,0,0,0.127070227073065,2.39665023047716,1.83000241127451,0.251308704225729,0.869121600961382,1.02286182932132,1.24672826735736,0.811206315338788,0.101839363850316,0,0,0.210441855886474,0,0,0.180062129805349,0.30140963567143,0,0.2562274405697,0.374806898238915,1.55222022443409,0,0,0.351902248327898,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.205809224758569,0,0,0.213288250535234,0.464473343720877,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0.140271639780637,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.77982123956051,3.7507739709505,0,0,0,0,0,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0.963963949265421,0.141940085208269,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.680879211507576,0.36012218806262,0.1293586837827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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:235283 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=2bp_to_ENSMUST00000153029_5end | |||
|cluster_id=chr9:40200008..40200018,- | |||
|description=CAGE_peak_22_at_Gramd1b_5end | |||
|id=chr9:40200008..40200018,- | |||
|ontology_enrichment_celltype=CL:0002319!9.82e-11!43;CL:0000221!2.93e-10!44;CL:0000133!2.93e-10!44;CL:0000117!2.09e-08!23;CL:0000337!2.09e-08!23;CL:0000055!7.23e-08!50;CL:0000540!7.90e-08!33;CL:0000047!7.90e-08!33;CL:0000031!7.90e-08!33;CL:0000404!7.90e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,1.84e-11,3;CL:0002610,3.19e-11,3;CL:0000117,1.54e-08,23;CL:0000337,1.54e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.92e-29!75;UBERON:0001016!1.92e-29!75;UBERON:0001017!5.23e-28!73;UBERON:0005743!5.23e-28!73;UBERON:0004121!6.23e-25!102;UBERON:0000924!6.23e-25!102;UBERON:0006601!6.23e-25!102;UBERON:0001049!1.18e-21!52;UBERON:0005068!1.18e-21!52;UBERON:0006241!1.18e-21!52;UBERON:0007135!1.18e-21!52;UBERON:0000955!1.27e-20!50;UBERON:0006238!1.27e-20!50;UBERON:0000033!3.81e-20!63;UBERON:0002616!7.70e-20!49;UBERON:0002346!9.08e-20!71;UBERON:0003075!9.08e-20!71;UBERON:0007284!9.08e-20!71;UBERON:0003056!4.19e-15!49;UBERON:0003080!5.71e-14!40;UBERON:0002020!6.98e-14!34;UBERON:0002780!3.69e-13!39;UBERON:0001890!3.69e-13!39;UBERON:0006240!3.69e-13!39;UBERON:0007811!3.98e-11!86;UBERON:0002791!1.31e-10!29;UBERON:0003528!1.31e-10!29;UBERON:0001893!1.31e-10!29;UBERON:0000153!3.32e-10!94;UBERON:0003076!8.93e-09!12;UBERON:0003057!8.93e-09!12;UBERON:0002021!7.15e-08!10;UBERON:0000411!7.15e-08!10;UBERON:0001950!7.15e-08!10;UBERON:0002619!7.18e-08!17;UBERON:0002298!2.47e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.28e-29,54;UBERON:0001017,1.03e-24,73;UBERON:0001049,1.10e-24,52;UBERON:0005068,1.10e-24,52;UBERON:0006241,1.10e-24,52;UBERON:0007135,1.10e-24,52;UBERON:0001016,6.17e-24,75;UBERON:0002346,1.82e-21,64;UBERON:0003075,1.82e-21,64;UBERON:0007284,1.82e-21,64;UBERON:0002616,3.23e-20,46;UBERON:0004121,9.25e-20,95;UBERON:0000924,9.25e-20,95;UBERON:0006601,9.25e-20,95;UBERON:0000955,1.03e-19,47;UBERON:0006238,1.03e-19,47;UBERON:0002021,1.07e-19,10;UBERON:0000411,1.07e-19,10;UBERON:0001950,1.07e-19,10;UBERON:0002020,4.39e-19,34;UBERON:0010371,2.62e-18,73;UBERON:0003528,5.48e-17,29;UBERON:0002791,5.48e-17,29;UBERON:0001893,5.48e-17,29;UBERON:0003080,7.76e-16,40;UBERON:0002950,1.43e-14,4;UBERON:0001891,1.43e-14,4;UBERON:0009616,1.43e-14,4;UBERON:0010286,1.43e-14,4;UBERON:0003056,2.67e-14,49;UBERON:0002619,4.76e-14,17;UBERON:0002780,5.20e-14,39;UBERON:0001890,5.20e-14,39;UBERON:0006240,5.20e-14,39;UBERON:0010314,1.17e-13,92;UBERON:0002038,1.84e-11,3;UBERON:0009663,1.84e-11,3;UBERON:0009661,1.84e-11,3;UBERON:0000125,1.84e-11,3;UBERON:0002308,1.84e-11,3;UBERON:0004684,3.19e-11,3;UBERON:0002275,3.19e-11,3;UBERON:0000956,4.23e-11,21;UBERON:0001869,4.23e-11,21;UBERON:0000203,4.23e-11,21;UBERON:0003076,7.40e-10,12;UBERON:0003057,7.40e-10,12;UBERON:0000025,4.84e-09,114;UBERON:0001896,2.03e-08,2;UBERON:0002298,2.03e-08,2;UBERON:0005290,2.03e-08,2;UBERON:0010096,2.03e-08,2;UBERON:0004111,3.54e-08,122;UBERON:0002420,2.74e-07,8;UBERON:0007245,2.74e-07,8;UBERON:0010009,2.74e-07,8;UBERON:0010011,2.74e-07,8;UBERON:0000454,2.74e-07,8 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0.219686182734472,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0.633831403506179,0,0,0,0,0,0.599200221036809,1.15265491596466,0,0,0,1.42825492201902,0.220868540951614,0.122490799214954,0,0,3.30347642998166,1.65993539510744,3.68655679814984,0.791317726381163,0.274462930807229,0,5.30447698102624,2.8138130501584,2.59757021220577,1.17851434189467,0.711858403995515,0.745597783301202,0.605809546665472,0.377857800533928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0.173485326766136,0,0,0,0.117588707135705,0,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,1.17112318804619,0.83778682725382,0,0,0,0.127070227073065,2.39665023047716,1.83000241127451,0.251308704225729,0.869121600961382,1.02286182932132,1.24672826735736,0.811206315338788,0.101839363850316,0,0,0.210441855886474,0,0,0.180062129805349,0.30140963567143,0,0.2562274405697,0.374806898238915,1.55222022443409,0,0,0.351902248327898,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.205809224758569,0,0,0.213288250535234,0.464473343720877,0.128867461322093,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0.140271639780637,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.77982123956051,3.7507739709505,0,0,0,0,0,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0.963963949265421,0.141940085208269,0,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.680879211507576,0.36012218806262,0.129358683782755,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0.23467170806371,0,0.220528398054962,0,0,0,0,0,0.291480836629851,4.07935664423121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0.187682475451182,0.183151624267265,0,0.501572104035363,1.12950368523413,0.920650473014354,1.14579102687879,1.03111909406213,1.37016503954128,0,1.35004500046361,4.05289082901798,1.35942722695261,2.5888015587591,0.207574695168353,0,0,0,0,0.367687016900028,0,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.256100609619477,0.34461281373368,0.952587382566147,0.115884325944855,0.192909220463705,0.412085900803307,0.294397840268795,0,0.532427418478012,0,0.145346416632329,0.282328141245992,0.0846146078916765,0.365855945745545,0,0,0,0,0,0,0.464810523557898,0,0,0,0.214871054048298,0,0.220591419119515,0.231867835620421 | |||
|short_description=p22@Gramd1b | |||
}} |
Revision as of 01:59, 5 August 2015
Short description: | p22@Gramd1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_22_at_Gramd1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 2bp_to_ENSMUST00000153029_5end |
EntrezGene: | 235283 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 1.84e-11 | 3 |
raphe nuclei neuron | 3.19e-11 | 3 |
CNS neuron (sensu Vertebrata) | 1.54e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.54e-08 | 23 |