FFCP PHASE1:Mm9::chr4:136512699..136512786,-: Difference between revisions
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{{FFCP|EntrezGene=13842|HGNC=|MCL_coexpression_id=2926|UniProt=O09127|association_with_transcript=0bp_to_ENSMUST00000030420,NM_007939,uc008vis.1_5end|description=CAGE_peak_1_at_Epha8_5end|id=chr4:136512699..136512786,-|ontology_enrichment_celltype=CL:0000540!4.98e-15!33;CL:0000047!4.98e-15!33;CL:0000031!4.98e-15!33;CL:0000404!4.98e-15!33;CL:0000117!2.49e-14!23;CL:0000337!2.49e-14!23;CL:0000393!2.16e-10!39;CL:0000211!2.16e-10!39;CL:0002319!3.74e-08!43;CL:0000221!3.75e-08!44;CL:0000133!3.75e-08!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.82e-16,23;CL:0000337,1.82e-16,23;CL:0000540,2.36e-16,33;CL:0000047,2.36e-16,33;CL:0000031,2.36e-16,33;CL:0000404,2.36e-16,33;CL:0000393,2.10e-12,39;CL:0000211,2.10e-12,39;CL:0002319,2.00e-10,43;CL:0000221,5.42e-10,44;CL:0000133,5.42e-10,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!4.37e-23!71;UBERON:0003075!4.37e-23!71;UBERON:0007284!4.37e-23!71;UBERON:0001017!3.35e-21!73;UBERON:0005743!3.35e-21!73;UBERON:0000073!7.57e-20!75;UBERON:0001016!7.57e-20!75;UBERON:0000033!8.12e-20!63;UBERON:0003056!1.82e-19!49;UBERON:0001049!6.39e-19!52;UBERON:0005068!6.39e-19!52;UBERON:0006241!6.39e-19!52;UBERON:0007135!6.39e-19!52;UBERON:0004121!2.18e-18!102;UBERON:0000924!2.18e-18!102;UBERON:0006601!2.18e-18!102;UBERON:0002616!7.61e-17!49;UBERON:0000955!4.36e-16!50;UBERON:0006238!4.36e-16!50;UBERON:0002020!3.44e-15!34;UBERON:0003080!5.24e-14!40;UBERON:0002780!2.28e-13!39;UBERON:0001890!2.28e-13!39;UBERON:0006240!2.28e-13!39;UBERON:0002791!8.76e-12!29;UBERON:0003528!8.76e-12!29;UBERON:0001893!8.76e-12!29;UBERON:0000153!7.50e-10!94;UBERON:0007811!1.31e-09!86;UBERON:0000956!6.75e-07!21;UBERON:0001869!6.75e-07!21;UBERON:0000203!6.75e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.16e-30,64;UBERON:0003075,1.16e-30,64;UBERON:0007284,1.16e-30,64;UBERON:0001017,6.51e-26,73;UBERON:0004121,1.09e-25,95;UBERON:0000924,1.09e-25,95;UBERON:0006601,1.09e-25,95;UBERON:0001016,9.82e-25,75;UBERON:0010371,1.22e-24,73;UBERON:0000073,3.87e-24,54;UBERON:0001049,3.55e-22,52;UBERON:0005068,3.55e-22,52;UBERON:0006241,3.55e-22,52;UBERON:0007135,3.55e-22,52;UBERON:0003056,3.45e-21,49;UBERON:0002020,7.99e-18,34;UBERON:0002616,8.07e-17,46;UBERON:0000955,3.26e-16,47;UBERON:0006238,3.26e-16,47;UBERON:0010314,5.87e-16,92;UBERON:0003080,8.44e-15,40;UBERON:0002780,5.78e-14,39;UBERON:0001890,5.78e-14,39;UBERON:0006240,5.78e-14,39;UBERON:0003528,3.44e-13,29;UBERON:0002791,3.44e-13,29;UBERON:0001893,3.44e-13,29;UBERON:0002420,5.70e-09,8;UBERON:0007245,5.70e-09,8;UBERON:0010009,5.70e-09,8;UBERON:0010011,5.70e-09,8;UBERON:0000454,5.70e-09,8;UBERON:0003076,2.68e-08,12;UBERON:0003057,2.68e-08,12;UBERON:0002619,5.28e-08,17;UBERON:0000970,1.06e-07,9;UBERON:0000019,1.06e-07,9;UBERON:0000047,1.06e-07,9;UBERON:0010312,1.06e-07,9;UBERON:0004088,1.06e-07,9;UBERON:0002104,1.06e-07,9;UBERON:0001456,1.06e-07,9;UBERON:0003072,1.06e-07,9;UBERON:0004128,1.06e-07,9;UBERON:0003071,1.06e-07,9;UBERON:0002021,1.42e-07,10;UBERON:0000411,1.42e-07,10;UBERON:0001950,1.42e-07,10;UBERON:0002240,4.11e-07,6;UBERON:0005174,4.11e-07,6;UBERON:0001137,4.11e-07,6;UBERON:0000956,9.64e-07,21;UBERON:0001869,9.64e-07,21;UBERON:0000203,9.64e-07,21|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1621522601718,16.9277113367051,20.2826049121977,0,0,0,0,0,0,0,0.622137673850866,0.675029691658453,0.841299845405528,9.99778445413313,9.93908434282261,3.06226998037385,3.35459148563827,3.67687514644008,4.40463523997555,10.214987046815,6.14426133024974,13.3205150607496,11.7104183811084,9.37644067002168,5.30447698102624,5.06486349028512,3.66715794664344,11.1958862479994,10.2507610175354,10.8111678578674,0,0,0,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.45673551887624,0,0.29688427812965,0.346970653532272,0,0,0,0.23517741427141,0.251333182659351,0.247194967734374,0,0,0.161766849947409,0,0.484875253135222,0,16.1029438356351,18.2218634927706,0,0,0,0,8.23848516726525,6.8625090422794,23.9999812535571,2.25971616249959,1.79000820131231,6.02585329222724,7.46309810111685,2.24046600470696,0.124406970610093,0,2.73574412652416,0.780722657776222,2.75882525320168,6.12211241338187,13.2620239695429,27.6908551545904,35.6156142391882,59.9691037182264,6.46758426847539,0.215567992932842,0,0.175951124163949,1.53437012699302,1.66828349535359,1.0447564995665,0.823128545631774,0.796137067273973,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.841159794256509,4.83651678182637,0,0,0.213288250535234,0.464473343720877,0.257734922644187,0.201683524623343,0.22237804384487,0,0.474529061544512,0.164698954724011,0.251335208800269,0,0.38992817423824,0.898819408654221,0,0,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0.49095073923223,0.0632365371242573,0,0,0,0,0,0.589676985339609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.977789858652155,0.509235257325564,0,0,0,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13842 | |||
|HGNC= | |||
|MCL_coexpression_id=2926 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O09127 | |||
|association_with_transcript=0bp_to_ENSMUST00000030420,NM_007939,uc008vis.1_5end | |||
|cluster_id=chr4:136512699..136512786,- | |||
|description=CAGE_peak_1_at_Epha8_5end | |||
|id=chr4:136512699..136512786,- | |||
|ontology_enrichment_celltype=CL:0000540!4.98e-15!33;CL:0000047!4.98e-15!33;CL:0000031!4.98e-15!33;CL:0000404!4.98e-15!33;CL:0000117!2.49e-14!23;CL:0000337!2.49e-14!23;CL:0000393!2.16e-10!39;CL:0000211!2.16e-10!39;CL:0002319!3.74e-08!43;CL:0000221!3.75e-08!44;CL:0000133!3.75e-08!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.82e-16,23;CL:0000337,1.82e-16,23;CL:0000540,2.36e-16,33;CL:0000047,2.36e-16,33;CL:0000031,2.36e-16,33;CL:0000404,2.36e-16,33;CL:0000393,2.10e-12,39;CL:0000211,2.10e-12,39;CL:0002319,2.00e-10,43;CL:0000221,5.42e-10,44;CL:0000133,5.42e-10,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.37e-23!71;UBERON:0003075!4.37e-23!71;UBERON:0007284!4.37e-23!71;UBERON:0001017!3.35e-21!73;UBERON:0005743!3.35e-21!73;UBERON:0000073!7.57e-20!75;UBERON:0001016!7.57e-20!75;UBERON:0000033!8.12e-20!63;UBERON:0003056!1.82e-19!49;UBERON:0001049!6.39e-19!52;UBERON:0005068!6.39e-19!52;UBERON:0006241!6.39e-19!52;UBERON:0007135!6.39e-19!52;UBERON:0004121!2.18e-18!102;UBERON:0000924!2.18e-18!102;UBERON:0006601!2.18e-18!102;UBERON:0002616!7.61e-17!49;UBERON:0000955!4.36e-16!50;UBERON:0006238!4.36e-16!50;UBERON:0002020!3.44e-15!34;UBERON:0003080!5.24e-14!40;UBERON:0002780!2.28e-13!39;UBERON:0001890!2.28e-13!39;UBERON:0006240!2.28e-13!39;UBERON:0002791!8.76e-12!29;UBERON:0003528!8.76e-12!29;UBERON:0001893!8.76e-12!29;UBERON:0000153!7.50e-10!94;UBERON:0007811!1.31e-09!86;UBERON:0000956!6.75e-07!21;UBERON:0001869!6.75e-07!21;UBERON:0000203!6.75e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.16e-30,64;UBERON:0003075,1.16e-30,64;UBERON:0007284,1.16e-30,64;UBERON:0001017,6.51e-26,73;UBERON:0004121,1.09e-25,95;UBERON:0000924,1.09e-25,95;UBERON:0006601,1.09e-25,95;UBERON:0001016,9.82e-25,75;UBERON:0010371,1.22e-24,73;UBERON:0000073,3.87e-24,54;UBERON:0001049,3.55e-22,52;UBERON:0005068,3.55e-22,52;UBERON:0006241,3.55e-22,52;UBERON:0007135,3.55e-22,52;UBERON:0003056,3.45e-21,49;UBERON:0002020,7.99e-18,34;UBERON:0002616,8.07e-17,46;UBERON:0000955,3.26e-16,47;UBERON:0006238,3.26e-16,47;UBERON:0010314,5.87e-16,92;UBERON:0003080,8.44e-15,40;UBERON:0002780,5.78e-14,39;UBERON:0001890,5.78e-14,39;UBERON:0006240,5.78e-14,39;UBERON:0003528,3.44e-13,29;UBERON:0002791,3.44e-13,29;UBERON:0001893,3.44e-13,29;UBERON:0002420,5.70e-09,8;UBERON:0007245,5.70e-09,8;UBERON:0010009,5.70e-09,8;UBERON:0010011,5.70e-09,8;UBERON:0000454,5.70e-09,8;UBERON:0003076,2.68e-08,12;UBERON:0003057,2.68e-08,12;UBERON:0002619,5.28e-08,17;UBERON:0000970,1.06e-07,9;UBERON:0000019,1.06e-07,9;UBERON:0000047,1.06e-07,9;UBERON:0010312,1.06e-07,9;UBERON:0004088,1.06e-07,9;UBERON:0002104,1.06e-07,9;UBERON:0001456,1.06e-07,9;UBERON:0003072,1.06e-07,9;UBERON:0004128,1.06e-07,9;UBERON:0003071,1.06e-07,9;UBERON:0002021,1.42e-07,10;UBERON:0000411,1.42e-07,10;UBERON:0001950,1.42e-07,10;UBERON:0002240,4.11e-07,6;UBERON:0005174,4.11e-07,6;UBERON:0001137,4.11e-07,6;UBERON:0000956,9.64e-07,21;UBERON:0001869,9.64e-07,21;UBERON:0000203,9.64e-07,21 | |||
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|short_description=p1@Epha8 | |||
}} |
Revision as of 00:02, 5 August 2015
Short description: | p1@Epha8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Epha8_5end |
Coexpression cluster: | MCL_coexpression_mm9:2926 |
Association with transcript: | 0bp_to_ENSMUST00000030420, NM_007939, uc008vis.1_5end |
EntrezGene: | 13842 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.82e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.82e-16 | 23 |
neuron | 2.36e-16 | 33 |
neuronal stem cell | 2.36e-16 | 33 |
neuroblast | 2.36e-16 | 33 |
electrically signaling cell | 2.36e-16 | 33 |
electrically responsive cell | 2.10e-12 | 39 |
electrically active cell | 2.10e-12 | 39 |
neural cell | 2.00e-10 | 43 |
ectodermal cell | 5.42e-10 | 44 |
neurectodermal cell | 5.42e-10 | 44 |