FFCP PHASE1:Mm9::chr2:29659170..29659180,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=493|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:29659170..29659180,+|id=chr2:29659170..29659180,+|ontology_enrichment_celltype=CL:0000473!6.14e-11!3;CL:0000627!6.14e-11!3;CL:0000682!6.14e-11!3;CL:0000239!3.50e-10!6;CL:0000677!3.50e-10!6;CL:0000212!3.50e-10!6;CL:0000584!3.50e-10!6;CL:0000075!9.87e-09!7;CL:0002563!8.58e-07!9;CL:0002251!8.58e-07!9|ontology_enrichment_celltype_v019_2=CL:0000682,2.81e-16,3;CL:0000239,1.85e-15,6;CL:0000677,1.85e-15,6;CL:0000584,1.85e-15,6;CL:0000075,2.76e-13,7;CL:0002563,2.23e-10,9;CL:0002251,2.23e-10,9;CL:0000066,3.66e-10,25;CL:0000473,2.68e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!5.23e-18!43;UBERON:0000344!8.53e-18!15;UBERON:0001242!1.63e-16!13;UBERON:0000060!1.63e-16!13;UBERON:0001262!1.63e-16!13;UBERON:0004786!1.63e-16!13;UBERON:0005409!2.86e-12!59;UBERON:0004923!1.44e-10!24;UBERON:0000331!2.12e-10!3;UBERON:0002116!2.12e-10!3;UBERON:0001204!2.12e-10!3;UBERON:0001168!2.12e-10!3;UBERON:0003350!8.58e-07!9;UBERON:0004808!8.58e-07!9;UBERON:0001277!8.58e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.20e-20,31;UBERON:0005409,5.75e-13,47;UBERON:0001242,5.61e-11,13;UBERON:0001262,5.61e-11,13;UBERON:0004786,5.61e-11,13;UBERON:0003350,2.23e-10,9;UBERON:0004808,2.23e-10,9;UBERON:0001277,2.23e-10,9;UBERON:0000344,1.70e-09,15;UBERON:0000485,1.60e-08,11|phase1_expression=0,3.14077866875425,3.63999391511629,3.0246421130683,2.00358291978539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799962113967033,0,1.14846392823004,1.7230479846363,1.29282739611533,0.760093677825496,0.756090389279792,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,9.6803253707778,0,0,0,0,0,0,0,4.13925393182425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27795687669216,2.64450566663544,0,0,0,0,0,0,1.42358718463353,0.329397909448022,0,0,0.38992817423824,1.79763881730844,1.72910439899755,1.99141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p@chr2:29659170..29659180,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=493 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:29659170..29659180,+ | |||
|description=CAGE_peak_at_chr2:29659170..29659180,+ | |||
|id=chr2:29659170..29659180,+ | |||
|ontology_enrichment_celltype=CL:0000473!6.14e-11!3;CL:0000627!6.14e-11!3;CL:0000682!6.14e-11!3;CL:0000239!3.50e-10!6;CL:0000677!3.50e-10!6;CL:0000212!3.50e-10!6;CL:0000584!3.50e-10!6;CL:0000075!9.87e-09!7;CL:0002563!8.58e-07!9;CL:0002251!8.58e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.81e-16,3;CL:0000239,1.85e-15,6;CL:0000677,1.85e-15,6;CL:0000584,1.85e-15,6;CL:0000075,2.76e-13,7;CL:0002563,2.23e-10,9;CL:0002251,2.23e-10,9;CL:0000066,3.66e-10,25;CL:0000473,2.68e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.23e-18!43;UBERON:0000344!8.53e-18!15;UBERON:0001242!1.63e-16!13;UBERON:0000060!1.63e-16!13;UBERON:0001262!1.63e-16!13;UBERON:0004786!1.63e-16!13;UBERON:0005409!2.86e-12!59;UBERON:0004923!1.44e-10!24;UBERON:0000331!2.12e-10!3;UBERON:0002116!2.12e-10!3;UBERON:0001204!2.12e-10!3;UBERON:0001168!2.12e-10!3;UBERON:0003350!8.58e-07!9;UBERON:0004808!8.58e-07!9;UBERON:0001277!8.58e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.20e-20,31;UBERON:0005409,5.75e-13,47;UBERON:0001242,5.61e-11,13;UBERON:0001262,5.61e-11,13;UBERON:0004786,5.61e-11,13;UBERON:0003350,2.23e-10,9;UBERON:0004808,2.23e-10,9;UBERON:0001277,2.23e-10,9;UBERON:0000344,1.70e-09,15;UBERON:0000485,1.60e-08,11 | |||
|phase1_expression=0,3.14077866875425,3.63999391511629,3.0246421130683,2.00358291978539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799962113967033,0,1.14846392823004,1.7230479846363,1.29282739611533,0.760093677825496,0.756090389279792,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,9.6803253707778,0,0,0,0,0,0,0,4.13925393182425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27795687669216,2.64450566663544,0,0,0,0,0,0,1.42358718463353,0.329397909448022,0,0,0.38992817423824,1.79763881730844,1.72910439899755,1.99141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr2:29659170..29659180,+ | |||
}} |
Latest revision as of 23:36, 4 August 2015
Short description: | p@chr2:29659170..29659180, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:29659170..29659180, + |
Coexpression cluster: | MCL_coexpression_mm9:493 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.81e-16 | 3 |
brush border epithelial cell | 1.85e-15 | 6 |
gut absorptive cell | 1.85e-15 | 6 |
enterocyte | 1.85e-15 | 6 |
columnar/cuboidal epithelial cell | 2.76e-13 | 7 |
intestinal epithelial cell | 2.23e-10 | 9 |
epithelial cell of alimentary canal | 2.23e-10 | 9 |
epithelial cell | 3.66e-10 | 25 |
defensive cell | 2.68e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.20e-20 | 31 |
gastrointestinal system | 5.75e-13 | 47 |
intestinal mucosa | 5.61e-11 | 13 |
wall of intestine | 5.61e-11 | 13 |
gastrointestinal system mucosa | 5.61e-11 | 13 |
epithelium of mucosa | 2.23e-10 | 9 |
gastrointestinal system epithelium | 2.23e-10 | 9 |
intestinal epithelium | 2.23e-10 | 9 |
mucosa | 1.70e-09 | 15 |
simple columnar epithelium | 1.60e-08 | 11 |