FFCP PHASE1:Mm9::chr7:29346063..29346073,-: Difference between revisions
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|id=chr7:29346063..29346073,-
|short_description=p@chr7:29346063..29346073,-
|description=CAGE_peak_at_chr7:29346063..29346073,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=293 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:29346063..29346073,- | |||
|description=CAGE_peak_at_chr7:29346063..29346073,- | |||
|id=chr7:29346063..29346073,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002611,8.48e-10,2;CL:0000878,1.03e-09,2;CL:0000129,1.03e-09,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!6.37e-17!86;UBERON:0000153!9.74e-16!94;UBERON:0001017!2.34e-14!73;UBERON:0005743!2.34e-14!73;UBERON:0000073!9.39e-14!75;UBERON:0001016!9.39e-14!75;UBERON:0002021!9.79e-14!10;UBERON:0000411!9.79e-14!10;UBERON:0001950!9.79e-14!10;UBERON:0001049!1.86e-13!52;UBERON:0005068!1.86e-13!52;UBERON:0006241!1.86e-13!52;UBERON:0007135!1.86e-13!52;UBERON:0000955!1.49e-12!50;UBERON:0006238!1.49e-12!50;UBERON:0002616!1.50e-11!49;UBERON:0002020!3.56e-11!34;UBERON:0000033!1.17e-09!63;UBERON:0002346!5.17e-09!71;UBERON:0003075!5.17e-09!71;UBERON:0007284!5.17e-09!71;UBERON:0002619!7.61e-09!17;UBERON:0004121!9.25e-09!102;UBERON:0000924!9.25e-09!102;UBERON:0006601!9.25e-09!102;UBERON:0000064!1.20e-08!99;UBERON:0003076!1.41e-08!12;UBERON:0003057!1.41e-08!12;UBERON:0000956!3.92e-08!21;UBERON:0001869!3.92e-08!21;UBERON:0000203!3.92e-08!21;UBERON:0002370!8.42e-08!23;UBERON:0000974!8.42e-08!23;UBERON:0004807!8.42e-08!23;UBERON:0005058!8.42e-08!23;UBERON:0003351!8.42e-08!23;UBERON:0009113!8.42e-08!23;UBERON:0003295!8.42e-08!23;UBERON:0009722!8.42e-08!23;UBERON:0005562!8.42e-08!23;UBERON:0007690!8.42e-08!23;UBERON:0002240!9.37e-08!6;UBERON:0005174!9.37e-08!6;UBERON:0001137!9.37e-08!6;UBERON:0006562!2.31e-07!24;UBERON:0003408!2.31e-07!24;UBERON:0001557!2.31e-07!24;UBERON:0001042!2.31e-07!24;UBERON:0008814!2.31e-07!24;UBERON:0009145!2.31e-07!24;UBERON:0002791!2.55e-07!29;UBERON:0003528!2.55e-07!29;UBERON:0001893!2.55e-07!29;UBERON:0000063!3.11e-07!35;UBERON:0003080!3.21e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.66e-19,10;UBERON:0000411,1.66e-19,10;UBERON:0001950,1.66e-19,10;UBERON:0001017,1.31e-13,73;UBERON:0001016,3.64e-13,75;UBERON:0000073,1.20e-12,54;UBERON:0001049,2.42e-11,52;UBERON:0005068,2.42e-11,52;UBERON:0006241,2.42e-11,52;UBERON:0007135,2.42e-11,52;UBERON:0002619,3.75e-11,17;UBERON:0002020,9.86e-11,34;UBERON:0002256,8.48e-10,2;UBERON:0004121,9.23e-10,95;UBERON:0000924,9.23e-10,95;UBERON:0006601,9.23e-10,95;UBERON:0000956,7.14e-09,21;UBERON:0001869,7.14e-09,21;UBERON:0000203,7.14e-09,21;UBERON:0002346,8.78e-09,64;UBERON:0003075,8.78e-09,64;UBERON:0007284,8.78e-09,64;UBERON:0000955,8.92e-09,47;UBERON:0006238,8.92e-09,47;UBERON:0003076,1.16e-08,12;UBERON:0003057,1.16e-08,12;UBERON:0001948,2.45e-08,5;UBERON:0002315,2.45e-08,5;UBERON:0010371,2.05e-07,73;UBERON:0002616,2.06e-07,46;UBERON:0002240,5.15e-07,6;UBERON:0005174,5.15e-07,6;UBERON:0001137,5.15e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09720077362883,3.84218305321555,0,0,0,2.85650984403804,3.75476519617743,0,0,0,1.10115880999389,0.893811366596314,0.768032666281217,0,0,0,0.558365998002762,0,0,1.76777151284201,0.996601765593721,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04723353406728,0,0,0,0,0.449371918214468,0,0.376963056338593,0.695297280769106,1.02286182932132,0.20778804455956,2.75810147215188,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,3.04750385139728,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.51968329191118,0.895133478337407,0.993406773906324,0.721172697119813,1.03382669022204,0.605798699688886,1.447929326445,1.20991422164209,0.292373642219257,0.865906574762965,1.28564592399726,0,0,0,0,0,0,0,0,0,1.6942555278512,2.30162618253588,2.86447756719698,1.89038500578056,1.37016503954128,0.755393897389701,1.35004500046361,1.35096360967266,0,0.51776031175182,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0.220591419119515,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09720077362883,3.84218305321555,0,0,0,2.85650984403804,3.75476519617743,0,0,0,1.10115880999389,0.893811366596314,0.768032666281217,0,0,0,0.558365998002762,0,0,1.76777151284201,0.996601765593721,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04723353406728,0,0,0,0,0.449371918214468,0,0.376963056338593,0.695297280769106,1.02286182932132,0.20778804455956,2.75810147215188,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,3.04750385139728,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.51968329191118,0.895133478337407,0.993406773906324,0.721172697119813,1.03382669022204,0.605798699688886,1.447929326445,1.20991422164209,0.292373642219257,0.865906574762965,1.28564592399726,0,0,0,0,0,0,0,0,0,1.6942555278512,2.30162618253588,2.86447756719698,1.89038500578056,1.37016503954128,0.755393897389701,1.35004500046361,1.35096360967266,0,0.51776031175182,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0.220591419119515,0.231867835620421 | ||
|short_description=p@chr7:29346063..29346073,- | |||
}} | }} |
Latest revision as of 23:12, 4 August 2015
Short description: | p@chr7:29346063..29346073, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:29346063..29346073, - |
Coexpression cluster: | MCL_coexpression_mm9:293 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the dorsal spinal cord | 8.48e-10 | 2 |
central nervous system macrophage | 1.03e-09 | 2 |
microglial cell | 1.03e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.66e-19 | 10 |
visual cortex | 1.66e-19 | 10 |
neocortex | 1.66e-19 | 10 |
central nervous system | 1.31e-13 | 73 |
nervous system | 3.64e-13 | 75 |
regional part of nervous system | 1.20e-12 | 54 |
neural tube | 2.42e-11 | 52 |
neural rod | 2.42e-11 | 52 |
future spinal cord | 2.42e-11 | 52 |
neural keel | 2.42e-11 | 52 |
regional part of cerebral cortex | 3.75e-11 | 17 |
gray matter | 9.86e-11 | 34 |
dorsal horn of spinal cord | 8.48e-10 | 2 |
ectoderm-derived structure | 9.23e-10 | 95 |
ectoderm | 9.23e-10 | 95 |
presumptive ectoderm | 9.23e-10 | 95 |
cerebral cortex | 7.14e-09 | 21 |
cerebral hemisphere | 7.14e-09 | 21 |
pallium | 7.14e-09 | 21 |
neurectoderm | 8.78e-09 | 64 |
neural plate | 8.78e-09 | 64 |
presumptive neural plate | 8.78e-09 | 64 |
brain | 8.92e-09 | 47 |
future brain | 8.92e-09 | 47 |
posterior neural tube | 1.16e-08 | 12 |
chordal neural plate | 1.16e-08 | 12 |
regional part of spinal cord | 2.45e-08 | 5 |
gray matter of spinal cord | 2.45e-08 | 5 |
ecto-epithelium | 2.05e-07 | 73 |
regional part of brain | 2.06e-07 | 46 |
spinal cord | 5.15e-07 | 6 |
dorsal region element | 5.15e-07 | 6 |
dorsum | 5.15e-07 | 6 |