FFCP PHASE1:Mm9::chr12:28021784..28021797,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=100 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:28021784..28021797,- | |||
|description=CAGE_peak_at_chr12:28021784..28021797,- | |description=CAGE_peak_at_chr12:28021784..28021797,- | ||
|id=chr12:28021784..28021797,- | |id=chr12:28021784..28021797,- | ||
|ontology_enrichment_celltype=CL:0000117!5.33e-11!23;CL:0000337!5.33e-11!23;CL:0000540!1.58e-10!33;CL:0000047!1.58e-10!33;CL:0000031!1.58e-10!33;CL:0000404!1.58e-10!33;CL:0002609!5.75e-09!6;CL:0000393!6.07e-08!39;CL:0000211!6.07e-08!39;CL:0002319!1.98e-07!43;CL:0000221!4.02e-07!44;CL:0000133!4.02e-07!44 | |ontology_enrichment_celltype=CL:0000117!5.33e-11!23;CL:0000337!5.33e-11!23;CL:0000540!1.58e-10!33;CL:0000047!1.58e-10!33;CL:0000031!1.58e-10!33;CL:0000404!1.58e-10!33;CL:0002609!5.75e-09!6;CL:0000393!6.07e-08!39;CL:0000211!6.07e-08!39;CL:0002319!1.98e-07!43;CL:0000221!4.02e-07!44;CL:0000133!4.02e-07!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0002609,1.02e-32,6;CL:0000117,1.91e-26,23;CL:0000337,1.91e-26,23;CL:0000540,5.42e-18,33;CL:0000047,5.42e-18,33;CL:0000031,5.42e-18,33;CL:0000404,5.42e-18,33;CL:0002608,6.51e-17,3;CL:0000120,7.18e-16,3;CL:0000393,5.40e-15,39;CL:0000211,5.40e-15,39;CL:0002319,1.86e-13,43;CL:0000221,4.07e-13,44;CL:0000133,4.07e-13,44;CL:0002613,1.10e-07,3;CL:0002321,1.17e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!8.75e-09!71;UBERON:0003075!8.75e-09!71;UBERON:0007284!8.75e-09!71;UBERON:0003056!1.46e-08!49;UBERON:0004121!2.88e-07!102;UBERON:0000924!2.88e-07!102;UBERON:0006601!2.88e-07!102;UBERON:0001017!5.42e-07!73;UBERON:0005743!5.42e-07!73;UBERON:0002780!6.86e-07!39;UBERON:0001890!6.86e-07!39;UBERON:0006240!6.86e-07!39;UBERON:0002020!8.64e-07!34 | |ontology_enrichment_uberon=UBERON:0002346!8.75e-09!71;UBERON:0003075!8.75e-09!71;UBERON:0007284!8.75e-09!71;UBERON:0003056!1.46e-08!49;UBERON:0004121!2.88e-07!102;UBERON:0000924!2.88e-07!102;UBERON:0006601!2.88e-07!102;UBERON:0001017!5.42e-07!73;UBERON:0005743!5.42e-07!73;UBERON:0002780!6.86e-07!39;UBERON:0001890!6.86e-07!39;UBERON:0006240!6.86e-07!39;UBERON:0002020!8.64e-07!34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,6.88e-14,29;UBERON:0002791,6.88e-14,29;UBERON:0001893,6.88e-14,29;UBERON:0002020,1.12e-11,34;UBERON:0002780,4.98e-10,39;UBERON:0001890,4.98e-10,39;UBERON:0006240,4.98e-10,39;UBERON:0000369,9.45e-10,5;UBERON:0002435,9.45e-10,5;UBERON:0000204,9.45e-10,5;UBERON:0010082,9.45e-10,5;UBERON:0003080,9.49e-10,40;UBERON:0000956,4.57e-09,21;UBERON:0001869,4.57e-09,21;UBERON:0000203,4.57e-09,21;UBERON:0001017,8.95e-09,73;UBERON:0001016,1.71e-08,75;UBERON:0002616,2.54e-08,46;UBERON:0000955,4.05e-08,47;UBERON:0006238,4.05e-08,47;UBERON:0003056,9.72e-08,49;UBERON:0001954,1.54e-07,7;UBERON:0003022,1.54e-07,7;UBERON:0002421,1.54e-07,7;UBERON:0000349,1.54e-07,7;UBERON:0002600,1.54e-07,7;UBERON:0001049,3.19e-07,52;UBERON:0005068,3.19e-07,52;UBERON:0006241,3.19e-07,52;UBERON:0007135,3.19e-07,52;UBERON:0000073,6.55e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,1.21389876515759,1.05798195854407,2.53532561402472,0,0,0,0,0,0,0,3.52544681848824,3.78016627328734,4.41682418837902,0,0,2.57230678351403,3.35459148563827,1.83843757322004,0,0.127687338085188,0,1.58263545276233,1.00636407962651,0.52091337055676,0,0,0,0.589257170947335,0.142371680799103,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0,0,0.23517741427141,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,1.50785222535437,0,0.255715457330331,0,0,0.101839363850316,0,0,0,0.780722657776222,0,0.180062129805349,0.452114453507145,0.204109497453984,0.12811372028485,0.0937017245597288,0,1.5089759505299,0.189106080167819,0.351902248327898,0.43839146485515,1.39023624612799,0,0.205782136407943,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0.720332286654991,0,0,1.2797295032114,0.928946687441754,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,1.1270773567308,0.407302655690628,0,0.210407459670956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339490171550376,0,0,0,0.195133647857799,0.315270288212382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0.430846795465598,0,0.445597348164788,0,0,0.876767573733936,0,0,0,0.178065603667255,0,0,0,0.485561272309963,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.258717367565509,0,0.354680467284547,0.178368817602071,0.658196082408484,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515559547031063,0,0.755393897389701,0,0,0,0,1.55681021376265,0,0.341467211508268,0.243106717068294,0,0.183843508450014,0.222246727801615,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0.685738504770831,0.532427418478012,0,0,0.0941093804153306,0.338458431566706,0.548783918618318,0,0,0.561142271657738,0.118635018124174,0.394017929502254,0,0.154936841185966,0,0.249810577937946,0.467863216890817,0.644613162144895,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,1.21389876515759,1.05798195854407,2.53532561402472,0,0,0,0,0,0,0,3.52544681848824,3.78016627328734,4.41682418837902,0,0,2.57230678351403,3.35459148563827,1.83843757322004,0,0.127687338085188,0,1.58263545276233,1.00636407962651,0.52091337055676,0,0,0,0.589257170947335,0.142371680799103,0.745597783301202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0,0,0.23517741427141,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,1.50785222535437,0,0.255715457330331,0,0,0.101839363850316,0,0,0,0.780722657776222,0,0.180062129805349,0.452114453507145,0.204109497453984,0.12811372028485,0.0937017245597288,0,1.5089759505299,0.189106080167819,0.351902248327898,0.43839146485515,1.39023624612799,0,0.205782136407943,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0.720332286654991,0,0,1.2797295032114,0.928946687441754,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,1.1270773567308,0.407302655690628,0,0.210407459670956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339490171550376,0,0,0,0.195133647857799,0.315270288212382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0.430846795465598,0,0.445597348164788,0,0,0.876767573733936,0,0,0,0.178065603667255,0,0,0,0.485561272309963,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.258717367565509,0,0.354680467284547,0.178368817602071,0.658196082408484,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515559547031063,0,0.755393897389701,0,0,0,0,1.55681021376265,0,0.341467211508268,0.243106717068294,0,0.183843508450014,0.222246727801615,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0.685738504770831,0.532427418478012,0,0,0.0941093804153306,0.338458431566706,0.548783918618318,0,0,0.561142271657738,0.118635018124174,0.394017929502254,0,0.154936841185966,0,0.249810577937946,0.467863216890817,0.644613162144895,0.191288332068843,0,0 | ||
|short_description=p@chr12:28021784..28021797,- | |short_description=p@chr12:28021784..28021797,- | ||
}} | }} |
Latest revision as of 22:48, 4 August 2015
Short description: | p@chr12:28021784..28021797, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:28021784..28021797, - |
Coexpression cluster: | MCL_coexpression_mm9:100 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 1.02e-32 | 6 |
CNS neuron (sensu Vertebrata) | 1.91e-26 | 23 |
neuroblast (sensu Vertebrata) | 1.91e-26 | 23 |
neuron | 5.42e-18 | 33 |
neuronal stem cell | 5.42e-18 | 33 |
neuroblast | 5.42e-18 | 33 |
electrically signaling cell | 5.42e-18 | 33 |
hippocampal neuron | 6.51e-17 | 3 |
granule cell | 7.18e-16 | 3 |
electrically responsive cell | 5.40e-15 | 39 |
electrically active cell | 5.40e-15 | 39 |
neural cell | 1.86e-13 | 43 |
ectodermal cell | 4.07e-13 | 44 |
neurectodermal cell | 4.07e-13 | 44 |
striatum neuron | 1.10e-07 | 3 |
embryonic cell | 1.17e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 6.88e-14 | 29 |
regional part of telencephalon | 6.88e-14 | 29 |
telencephalon | 6.88e-14 | 29 |
gray matter | 1.12e-11 | 34 |
regional part of forebrain | 4.98e-10 | 39 |
forebrain | 4.98e-10 | 39 |
future forebrain | 4.98e-10 | 39 |
corpus striatum | 9.45e-10 | 5 |
striatum | 9.45e-10 | 5 |
ventral part of telencephalon | 9.45e-10 | 5 |
future corpus striatum | 9.45e-10 | 5 |
anterior neural tube | 9.49e-10 | 40 |
cerebral cortex | 4.57e-09 | 21 |
cerebral hemisphere | 4.57e-09 | 21 |
pallium | 4.57e-09 | 21 |
central nervous system | 8.95e-09 | 73 |
nervous system | 1.71e-08 | 75 |
regional part of brain | 2.54e-08 | 46 |
brain | 4.05e-08 | 47 |
future brain | 4.05e-08 | 47 |
pre-chordal neural plate | 9.72e-08 | 49 |
Ammon's horn | 1.54e-07 | 7 |
lobe parts of cerebral cortex | 1.54e-07 | 7 |
hippocampal formation | 1.54e-07 | 7 |
limbic system | 1.54e-07 | 7 |
limbic lobe | 1.54e-07 | 7 |
neural tube | 3.19e-07 | 52 |
neural rod | 3.19e-07 | 52 |
future spinal cord | 3.19e-07 | 52 |
neural keel | 3.19e-07 | 52 |
regional part of nervous system | 6.55e-07 | 54 |