FFCP PHASE1:Mm9::chr6:115085008..115085011,+: Difference between revisions
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{{FFCP|EntrezGene=20965|HGNC=|MCL_coexpression_id=1|UniProt=Q64332,Q8CE19|association_with_transcript=88bp_to_ENSMUST00000009538,ENSMUST00000169345,NM_001111015,NM_013681,uc009dim.2,uc009din.2_5end|description=CAGE_peak_2_at_Syn2_5end|id=chr6:115085008..115085011,+|ontology_enrichment_celltype=CL:0000117!2.89e-15!23;CL:0000337!2.89e-15!23;CL:0000540!9.88e-12!33;CL:0000047!9.88e-12!33;CL:0000031!9.88e-12!33;CL:0000404!9.88e-12!33;CL:0002319!8.26e-10!43;CL:0000221!2.13e-09!44;CL:0000133!2.13e-09!44;CL:0000393!9.46e-09!39;CL:0000211!9.46e-09!39;CL:0000055!2.60e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.92e-11,23;CL:0000337,3.92e-11,23;CL:0002614,7.80e-09,3;CL:0002610,2.42e-08,3;CL:0000540,4.01e-07,33;CL:0000047,4.01e-07,33;CL:0000031,4.01e-07,33;CL:0000404,4.01e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.56e-28!73;UBERON:0005743!6.56e-28!73;UBERON:0000073!1.16e-26!75;UBERON:0001016!1.16e-26!75;UBERON:0001049!4.47e-23!52;UBERON:0005068!4.47e-23!52;UBERON:0006241!4.47e-23!52;UBERON:0007135!4.47e-23!52;UBERON:0002020!6.05e-23!34;UBERON:0000955!8.70e-22!50;UBERON:0006238!8.70e-22!50;UBERON:0002346!2.91e-21!71;UBERON:0003075!2.91e-21!71;UBERON:0007284!2.91e-21!71;UBERON:0004121!6.31e-21!102;UBERON:0000924!6.31e-21!102;UBERON:0006601!6.31e-21!102;UBERON:0002616!8.40e-21!49;UBERON:0002791!9.41e-19!29;UBERON:0003528!9.41e-19!29;UBERON:0001893!9.41e-19!29;UBERON:0000033!1.87e-16!63;UBERON:0003080!2.99e-16!40;UBERON:0002780!2.02e-15!39;UBERON:0001890!2.02e-15!39;UBERON:0006240!2.02e-15!39;UBERON:0000956!4.30e-14!21;UBERON:0001869!4.30e-14!21;UBERON:0000203!4.30e-14!21;UBERON:0003056!2.76e-13!49;UBERON:0002619!4.56e-13!17;UBERON:0002021!7.35e-12!10;UBERON:0000411!7.35e-12!10;UBERON:0001950!7.35e-12!10;UBERON:0007811!1.05e-09!86;UBERON:0000153!7.87e-08!94;UBERON:0003076!1.52e-07!12;UBERON:0003057!1.52e-07!12;UBERON:0002298!4.11e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.39e-38,54;UBERON:0001017,1.66e-35,73;UBERON:0001016,2.16e-34,75;UBERON:0001049,2.84e-34,52;UBERON:0005068,2.84e-34,52;UBERON:0006241,2.84e-34,52;UBERON:0007135,2.84e-34,52;UBERON:0002020,1.80e-30,34;UBERON:0000955,6.80e-28,47;UBERON:0006238,6.80e-28,47;UBERON:0002346,9.88e-27,64;UBERON:0003075,9.88e-27,64;UBERON:0007284,9.88e-27,64;UBERON:0002021,1.59e-26,10;UBERON:0000411,1.59e-26,10;UBERON:0001950,1.59e-26,10;UBERON:0002616,6.00e-26,46;UBERON:0004121,8.33e-26,95;UBERON:0000924,8.33e-26,95;UBERON:0006601,8.33e-26,95;UBERON:0003528,6.12e-24,29;UBERON:0002791,6.12e-24,29;UBERON:0001893,6.12e-24,29;UBERON:0003080,5.79e-23,40;UBERON:0010371,1.06e-22,73;UBERON:0002780,2.90e-21,39;UBERON:0001890,2.90e-21,39;UBERON:0006240,2.90e-21,39;UBERON:0002619,3.13e-21,17;UBERON:0000956,9.15e-20,21;UBERON:0001869,9.15e-20,21;UBERON:0000203,9.15e-20,21;UBERON:0003056,6.89e-18,49;UBERON:0010314,9.03e-17,92;UBERON:0000025,2.28e-12,114;UBERON:0003076,1.03e-11,12;UBERON:0003057,1.03e-11,12;UBERON:0004111,3.67e-11,122;UBERON:0002950,6.20e-11,4;UBERON:0001891,6.20e-11,4;UBERON:0009616,6.20e-11,4;UBERON:0010286,6.20e-11,4;UBERON:0002240,4.71e-10,6;UBERON:0005174,4.71e-10,6;UBERON:0001137,4.71e-10,6;UBERON:0011216,2.93e-09,194;UBERON:0002038,7.80e-09,3;UBERON:0009663,7.80e-09,3;UBERON:0009661,7.80e-09,3;UBERON:0000125,7.80e-09,3;UBERON:0002308,7.80e-09,3;UBERON:0004684,2.42e-08,3;UBERON:0002275,2.42e-08,3;UBERON:0001948,7.92e-08,5;UBERON:0002315,7.92e-08,5|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0.633831403506179,0,0,0,0,0,0.299600110518405,1.15265491596466,0.311068836925433,0,0.210324961351382,1.42825492201902,1.98781686856452,0.244981598429908,0.383381884072945,0.919218786610021,2.20231761998777,2.29837208553338,1.99688493233117,0.263772575460388,0.365950574409639,0,2.23346399201105,2.8138130501584,3.36156145108982,0.294628585473668,1.85083185038834,1.3047961207771,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0,0,0.753613202763113,0.117588707135705,0.376999773989026,0,0,0,0,0,0,0,0.585561594023094,1.25668024088073,0.255457055208591,0,0,0,1.9472783122627,2.28750301409313,0.251308704225729,3.12883776346098,5.11430914660661,2.70124457927428,1.62241263067758,0,0,0.505445516867349,0,0,0,0,0,0,0.12811372028485,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.88811855979556,1.13195073617213,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0.596869416123452,0.38992817423824,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0.238043640886014,0,0,0,0.159454768657487,0,0,0,0,0,0,0,1.9266070798535,1.52375192569864,0,0,0.315508219416257,0.390438744296638,0,0,0,0.283076530788832,0,0,0,2.89189184779626,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0.288030006257865,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0,0.183151624267265,0,0,5.64751842617067,2.76195141904306,4.01026859407578,4.98374228796694,2.05524755931193,6.7985450765073,4.05013500139084,2.2516060161211,3.62513927187364,2.07104124700728,0,0,0,0,0,0.367687016900028,0,0.206035057238894,0.320919209591815,0.505394423527595,0,0,0.187283014939765,0.192075457214608,0.0574354689556133,0.476293691283074,0.463537303779422,0,0,0.294397840268795,0,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0,0,0.382576664137687,0.220591419119515,0|short_description=p2@Syn2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20965 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q64332,uniprot:Q8CE19 | |||
|association_with_transcript=88bp_to_ENSMUST00000009538,ENSMUST00000169345,NM_001111015,NM_013681,uc009dim.2,uc009din.2_5end | |||
|cluster_id=chr6:115085008..115085011,+ | |||
|description=CAGE_peak_2_at_Syn2_5end | |||
|id=chr6:115085008..115085011,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.89e-15!23;CL:0000337!2.89e-15!23;CL:0000540!9.88e-12!33;CL:0000047!9.88e-12!33;CL:0000031!9.88e-12!33;CL:0000404!9.88e-12!33;CL:0002319!8.26e-10!43;CL:0000221!2.13e-09!44;CL:0000133!2.13e-09!44;CL:0000393!9.46e-09!39;CL:0000211!9.46e-09!39;CL:0000055!2.60e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.92e-11,23;CL:0000337,3.92e-11,23;CL:0002614,7.80e-09,3;CL:0002610,2.42e-08,3;CL:0000540,4.01e-07,33;CL:0000047,4.01e-07,33;CL:0000031,4.01e-07,33;CL:0000404,4.01e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.56e-28!73;UBERON:0005743!6.56e-28!73;UBERON:0000073!1.16e-26!75;UBERON:0001016!1.16e-26!75;UBERON:0001049!4.47e-23!52;UBERON:0005068!4.47e-23!52;UBERON:0006241!4.47e-23!52;UBERON:0007135!4.47e-23!52;UBERON:0002020!6.05e-23!34;UBERON:0000955!8.70e-22!50;UBERON:0006238!8.70e-22!50;UBERON:0002346!2.91e-21!71;UBERON:0003075!2.91e-21!71;UBERON:0007284!2.91e-21!71;UBERON:0004121!6.31e-21!102;UBERON:0000924!6.31e-21!102;UBERON:0006601!6.31e-21!102;UBERON:0002616!8.40e-21!49;UBERON:0002791!9.41e-19!29;UBERON:0003528!9.41e-19!29;UBERON:0001893!9.41e-19!29;UBERON:0000033!1.87e-16!63;UBERON:0003080!2.99e-16!40;UBERON:0002780!2.02e-15!39;UBERON:0001890!2.02e-15!39;UBERON:0006240!2.02e-15!39;UBERON:0000956!4.30e-14!21;UBERON:0001869!4.30e-14!21;UBERON:0000203!4.30e-14!21;UBERON:0003056!2.76e-13!49;UBERON:0002619!4.56e-13!17;UBERON:0002021!7.35e-12!10;UBERON:0000411!7.35e-12!10;UBERON:0001950!7.35e-12!10;UBERON:0007811!1.05e-09!86;UBERON:0000153!7.87e-08!94;UBERON:0003076!1.52e-07!12;UBERON:0003057!1.52e-07!12;UBERON:0002298!4.11e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.39e-38,54;UBERON:0001017,1.66e-35,73;UBERON:0001016,2.16e-34,75;UBERON:0001049,2.84e-34,52;UBERON:0005068,2.84e-34,52;UBERON:0006241,2.84e-34,52;UBERON:0007135,2.84e-34,52;UBERON:0002020,1.80e-30,34;UBERON:0000955,6.80e-28,47;UBERON:0006238,6.80e-28,47;UBERON:0002346,9.88e-27,64;UBERON:0003075,9.88e-27,64;UBERON:0007284,9.88e-27,64;UBERON:0002021,1.59e-26,10;UBERON:0000411,1.59e-26,10;UBERON:0001950,1.59e-26,10;UBERON:0002616,6.00e-26,46;UBERON:0004121,8.33e-26,95;UBERON:0000924,8.33e-26,95;UBERON:0006601,8.33e-26,95;UBERON:0003528,6.12e-24,29;UBERON:0002791,6.12e-24,29;UBERON:0001893,6.12e-24,29;UBERON:0003080,5.79e-23,40;UBERON:0010371,1.06e-22,73;UBERON:0002780,2.90e-21,39;UBERON:0001890,2.90e-21,39;UBERON:0006240,2.90e-21,39;UBERON:0002619,3.13e-21,17;UBERON:0000956,9.15e-20,21;UBERON:0001869,9.15e-20,21;UBERON:0000203,9.15e-20,21;UBERON:0003056,6.89e-18,49;UBERON:0010314,9.03e-17,92;UBERON:0000025,2.28e-12,114;UBERON:0003076,1.03e-11,12;UBERON:0003057,1.03e-11,12;UBERON:0004111,3.67e-11,122;UBERON:0002950,6.20e-11,4;UBERON:0001891,6.20e-11,4;UBERON:0009616,6.20e-11,4;UBERON:0010286,6.20e-11,4;UBERON:0002240,4.71e-10,6;UBERON:0005174,4.71e-10,6;UBERON:0001137,4.71e-10,6;UBERON:0011216,2.93e-09,194;UBERON:0002038,7.80e-09,3;UBERON:0009663,7.80e-09,3;UBERON:0009661,7.80e-09,3;UBERON:0000125,7.80e-09,3;UBERON:0002308,7.80e-09,3;UBERON:0004684,2.42e-08,3;UBERON:0002275,2.42e-08,3;UBERON:0001948,7.92e-08,5;UBERON:0002315,7.92e-08,5 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0.633831403506179,0,0,0,0,0,0.299600110518405,1.15265491596466,0.311068836925433,0,0.210324961351382,1.42825492201902,1.98781686856452,0.244981598429908,0.383381884072945,0.919218786610021,2.20231761998777,2.29837208553338,1.99688493233117,0.263772575460388,0.365950574409639,0,2.23346399201105,2.8138130501584,3.36156145108982,0.294628585473668,1.85083185038834,1.3047961207771,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0,0,0.753613202763113,0.117588707135705,0.376999773989026,0,0,0,0,0,0,0,0.585561594023094,1.25668024088073,0.255457055208591,0,0,0,1.9472783122627,2.28750301409313,0.251308704225729,3.12883776346098,5.11430914660661,2.70124457927428,1.62241263067758,0,0,0.505445516867349,0,0,0,0,0,0,0.12811372028485,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.88811855979556,1.13195073617213,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0.596869416123452,0.38992817423824,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0.238043640886014,0,0,0,0.159454768657487,0,0,0,0,0,0,0,1.9266070798535,1.52375192569864,0,0,0.315508219416257,0.390438744296638,0,0,0,0.283076530788832,0,0,0,2.89189184779626,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,2.59595422814714,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0.288030006257865,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0,0.183151624267265,0,0,5.64751842617067,2.76195141904306,4.01026859407578,4.98374228796694,2.05524755931193,6.7985450765073,4.05013500139084,2.2516060161211,3.62513927187364,2.07104124700728,0,0,0,0,0,0.367687016900028,0,0.206035057238894,0.320919209591815,0.505394423527595,0,0,0.187283014939765,0.192075457214608,0.0574354689556133,0.476293691283074,0.463537303779422,0,0,0.294397840268795,0,0,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0,0,0.382576664137687,0.220591419119515,0 | |||
|short_description=p2@Syn2 | |||
}} |
Revision as of 22:41, 4 August 2015
Short description: | p2@Syn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Syn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 88bp_to_ENSMUST00000009538, ENSMUST00000169345, NM_001111015, NM_013681, uc009dim.2, uc009din.2_5end |
EntrezGene: | 20965 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.92e-11 | 23 |
neuroblast (sensu Vertebrata) | 3.92e-11 | 23 |
neuron of the substantia nigra | 7.80e-09 | 3 |
raphe nuclei neuron | 2.42e-08 | 3 |
neuron | 4.01e-07 | 33 |
neuronal stem cell | 4.01e-07 | 33 |
neuroblast | 4.01e-07 | 33 |
electrically signaling cell | 4.01e-07 | 33 |