FFCP PHASE1:Mm9::chr10:80962341..80962353,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=440 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:80962341..80962353,- | |||
|description=CAGE_peak_at_chr10:80962341..80962353,- | |description=CAGE_peak_at_chr10:80962341..80962353,- | ||
|id=chr10:80962341..80962353,- | |id=chr10:80962341..80962353,- | ||
|ontology_enrichment_celltype=CL:0000988!1.72e-10!32;CL:0002032!1.72e-10!32;CL:0000037!1.72e-10!32;CL:0000566!1.72e-10!32;CL:0000837!1.72e-10!32;CL:0002031!1.72e-07!25;CL:0000838!3.08e-07!12;CL:0000791!6.03e-07!9;CL:0000789!6.03e-07!9;CL:0002420!6.03e-07!9;CL:0002419!6.03e-07!9;CL:0000790!6.03e-07!9 | |ontology_enrichment_celltype=CL:0000988!1.72e-10!32;CL:0002032!1.72e-10!32;CL:0000037!1.72e-10!32;CL:0000566!1.72e-10!32;CL:0000837!1.72e-10!32;CL:0002031!1.72e-07!25;CL:0000838!3.08e-07!12;CL:0000791!6.03e-07!9;CL:0000789!6.03e-07!9;CL:0002420!6.03e-07!9;CL:0002419!6.03e-07!9;CL:0000790!6.03e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.58e-22,32;CL:0002032,3.58e-22,32;CL:0000037,3.58e-22,32;CL:0000837,3.58e-22,32;CL:0002031,3.06e-14,25;CL:0002320,7.01e-14,46;CL:0000134,7.01e-14,46;CL:0000049,2.04e-13,19;CL:0000553,7.74e-13,6;CL:0000556,7.74e-13,6;CL:0000219,4.29e-11,54;CL:0000791,5.02e-11,9;CL:0000789,5.02e-11,9;CL:0002420,5.02e-11,9;CL:0002419,5.02e-11,9;CL:0000790,5.02e-11,9;CL:0000838,1.20e-10,12;CL:0000542,1.03e-09,13;CL:0000051,1.03e-09,13;CL:0000763,1.79e-09,16;CL:0000624,4.42e-09,8;CL:0000034,6.25e-09,97;CL:0000084,8.17e-09,11;CL:0000827,8.17e-09,11;CL:0000050,2.73e-08,9;CL:0000723,4.22e-07,91;CL:0000048,4.22e-07,91;CL:0000738,4.42e-07,17;CL:0002087,4.42e-07,17 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.06e-07,3;DOID:4045,1.06e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!5.28e-11!48;UBERON:0002390!1.56e-10!45;UBERON:0003061!1.56e-10!45;UBERON:0002405!3.94e-09!70;UBERON:0004177!1.15e-08!29;UBERON:0003081!1.48e-08!88;UBERON:0000926!2.61e-07!193;UBERON:0004120!2.61e-07!193;UBERON:0006603!2.61e-07!193 | |ontology_enrichment_uberon=UBERON:0002193!5.28e-11!48;UBERON:0002390!1.56e-10!45;UBERON:0003061!1.56e-10!45;UBERON:0002405!3.94e-09!70;UBERON:0004177!1.15e-08!29;UBERON:0003081!1.48e-08!88;UBERON:0000926!2.61e-07!193;UBERON:0004120!2.61e-07!193;UBERON:0006603!2.61e-07!193 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.01e-14,46;UBERON:0002193,1.48e-12,48;UBERON:0002405,1.48e-12,48;UBERON:0002390,3.05e-12,45;UBERON:0003061,3.05e-12,45;UBERON:0002204,2.82e-10,32;UBERON:0001474,1.30e-09,22;UBERON:0004765,1.30e-09,22;UBERON:0001434,1.30e-09,22;UBERON:0002371,1.79e-09,16;UBERON:0002106,2.67e-08,6;UBERON:0004457,2.67e-08,6;UBERON:0000042,2.67e-08,6;UBERON:0004854,2.67e-08,6;UBERON:0009034,2.67e-08,6;UBERON:0002095,2.67e-08,6;UBERON:0004782,2.67e-08,6;UBERON:0003281,2.67e-08,6;UBERON:0009664,2.67e-08,6;UBERON:0002296,2.67e-08,6;UBERON:0005602,2.67e-08,6;UBERON:0001179,2.67e-08,6;UBERON:0006293,2.67e-08,6;UBERON:0003887,8.77e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,7.48915275961142,1.12630977721333,1.40438715793196,0.171217968225505,0.319088635981346,2.9104124088305,4.28359971853087,1.66554880907831,2.02475267389826,1.39912375625629,14.0380663584416,12.4774134581222,13.580468857537,0.255129870453209,0.595745707205312,0,0,0.45881856213434,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,15.4856703372656,3.906676722619,3.66466620781659,5.88231488031014,11.6117732442936,7.2826552954673,0,0,0,0,0,0,0,0,0,26.8452169692378,6.5282592781021,12.7715643674136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.55362730188303,0.148442139064825,0,0,0,0.150722640552623,0.23517741427141,0.376999773989026,0,0.433798070759735,6.19227386364912,0.323533699894818,1.10420759230197,0.969750506270444,0,0,0.209446706813455,0,1.55759661857696,1.19980546198682,1.52484272487678,0,0,0,0,0.255715457330331,0,0,0.101839363850316,2.36373244159177,0.252722758433675,0,0,0.229902104433473,0,0,0.136072998302656,0,0,0,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0.205782136407943,0,3.51106593656617,1.80143534980301,3.12579849335152,0,0,0,0,0.196764231747404,0,0,0,0,0.16455984991348,0,0.162137619091711,0.146199987425332,0,0.402619256281115,0,0,0.330418782983798,0,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0.0632365371242573,0.295220295959204,0,0.246794327843601,0,0,0,0,0,0.72353147925725,0.25462585178142,2.30156909960649,0.810676133875177,0.549122826376163,0,0.372140947668503,0.312037673114561,0.505157755894224,0.179397413521912,0,1.66277871149944,0.189491411770485,0,0,0,0,0,1.36593553500459,0.630540576424764,0,0.478364305972461,1.14704320301017,1.03610989119537,0.578596234326046,0,0,0.983528546038072,0.275936746304732,0.160550589987792,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0.329940245945071,0,0,0,0,0.295301892880773,0,0.516856586336442,0.363533729477506,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0.304464949114599,0,0.21183207086382,0,0,0.484393280087717,0,0.358117032009409,0.164140899745061,0,0,2.22132145037209,0.412773735926445,1.29636169158798,1.69531611304222,2.59719032669948,3.43167259809784,2.88963330989554,2.93898049879682,3.59319931891502,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0,0,0,0,0,0,0,1.58005560314089,0.608175645870493,0.205421914329655,0.129920822977795,0.179026695667481,0,0.721172697119813,0.147689527174577,0.100966449948148,0.304827226619999,0.302478555410522,0.0974578807397524,0.384847366561318,0.701261413089414,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0.342869252385415,0.177475806159338,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0.644613162144895,0,0.441182838239031,0.695603506861264 | |phase1_expression=0,0,0,0,0,0,0,7.48915275961142,1.12630977721333,1.40438715793196,0.171217968225505,0.319088635981346,2.9104124088305,4.28359971853087,1.66554880907831,2.02475267389826,1.39912375625629,14.0380663584416,12.4774134581222,13.580468857537,0.255129870453209,0.595745707205312,0,0,0.45881856213434,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,15.4856703372656,3.906676722619,3.66466620781659,5.88231488031014,11.6117732442936,7.2826552954673,0,0,0,0,0,0,0,0,0,26.8452169692378,6.5282592781021,12.7715643674136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.55362730188303,0.148442139064825,0,0,0,0.150722640552623,0.23517741427141,0.376999773989026,0,0.433798070759735,6.19227386364912,0.323533699894818,1.10420759230197,0.969750506270444,0,0,0.209446706813455,0,1.55759661857696,1.19980546198682,1.52484272487678,0,0,0,0,0.255715457330331,0,0,0.101839363850316,2.36373244159177,0.252722758433675,0,0,0.229902104433473,0,0,0.136072998302656,0,0,0,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0.205782136407943,0,3.51106593656617,1.80143534980301,3.12579849335152,0,0,0,0,0.196764231747404,0,0,0,0,0.16455984991348,0,0.162137619091711,0.146199987425332,0,0.402619256281115,0,0,0.330418782983798,0,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0.0632365371242573,0.295220295959204,0,0.246794327843601,0,0,0,0,0,0.72353147925725,0.25462585178142,2.30156909960649,0.810676133875177,0.549122826376163,0,0.372140947668503,0.312037673114561,0.505157755894224,0.179397413521912,0,1.66277871149944,0.189491411770485,0,0,0,0,0,1.36593553500459,0.630540576424764,0,0.478364305972461,1.14704320301017,1.03610989119537,0.578596234326046,0,0,0.983528546038072,0.275936746304732,0.160550589987792,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0.329940245945071,0,0,0,0,0.295301892880773,0,0.516856586336442,0.363533729477506,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0.304464949114599,0,0.21183207086382,0,0,0.484393280087717,0,0.358117032009409,0.164140899745061,0,0,2.22132145037209,0.412773735926445,1.29636169158798,1.69531611304222,2.59719032669948,3.43167259809784,2.88963330989554,2.93898049879682,3.59319931891502,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0,0.165306911450672,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0,0,0,0,0,0,0,1.58005560314089,0.608175645870493,0.205421914329655,0.129920822977795,0.179026695667481,0,0.721172697119813,0.147689527174577,0.100966449948148,0.304827226619999,0.302478555410522,0.0974578807397524,0.384847366561318,0.701261413089414,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0,0,0,0.342869252385415,0.177475806159338,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0.644613162144895,0,0.441182838239031,0.695603506861264 | ||
|short_description=p@chr10:80962341..80962353,- | |short_description=p@chr10:80962341..80962353,- | ||
}} | }} |
Latest revision as of 21:30, 4 August 2015
Short description: | p@chr10:80962341..80962353, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:80962341..80962353, - |
Coexpression cluster: | MCL_coexpression_mm9:440 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.58e-22 | 32 |
hematopoietic oligopotent progenitor cell | 3.58e-22 | 32 |
hematopoietic stem cell | 3.58e-22 | 32 |
hematopoietic multipotent progenitor cell | 3.58e-22 | 32 |
hematopoietic lineage restricted progenitor cell | 3.06e-14 | 25 |
connective tissue cell | 7.01e-14 | 46 |
mesenchymal cell | 7.01e-14 | 46 |
common myeloid progenitor | 2.04e-13 | 19 |
megakaryocyte progenitor cell | 7.74e-13 | 6 |
megakaryocyte | 7.74e-13 | 6 |
motile cell | 4.29e-11 | 54 |
mature alpha-beta T cell | 5.02e-11 | 9 |
alpha-beta T cell | 5.02e-11 | 9 |
immature T cell | 5.02e-11 | 9 |
mature T cell | 5.02e-11 | 9 |
immature alpha-beta T cell | 5.02e-11 | 9 |
lymphoid lineage restricted progenitor cell | 1.20e-10 | 12 |
lymphocyte | 1.03e-09 | 13 |
common lymphoid progenitor | 1.03e-09 | 13 |
myeloid cell | 1.79e-09 | 16 |
CD4-positive, alpha-beta T cell | 4.42e-09 | 8 |
stem cell | 6.25e-09 | 97 |
T cell | 8.17e-09 | 11 |
pro-T cell | 8.17e-09 | 11 |
megakaryocyte-erythroid progenitor cell | 2.73e-08 | 9 |
somatic stem cell | 4.22e-07 | 91 |
multi fate stem cell | 4.22e-07 | 91 |
leukocyte | 4.42e-07 | 17 |
nongranular leukocyte | 4.42e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 7.01e-14 | 46 |
hemolymphoid system | 1.48e-12 | 48 |
immune system | 1.48e-12 | 48 |
hematopoietic system | 3.05e-12 | 45 |
blood island | 3.05e-12 | 45 |
musculoskeletal system | 2.82e-10 | 32 |
bone element | 1.30e-09 | 22 |
skeletal element | 1.30e-09 | 22 |
skeletal system | 1.30e-09 | 22 |
bone marrow | 1.79e-09 | 16 |
spleen | 2.67e-08 | 6 |
cavity lining | 2.67e-08 | 6 |
serous membrane | 2.67e-08 | 6 |
gastrointestinal system mesentery | 2.67e-08 | 6 |
stomach region | 2.67e-08 | 6 |
mesentery | 2.67e-08 | 6 |
gastrointestinal system serosa | 2.67e-08 | 6 |
mesentery of stomach | 2.67e-08 | 6 |
gut mesentery | 2.67e-08 | 6 |
dorsal mesentery | 2.67e-08 | 6 |
dorsal mesogastrium | 2.67e-08 | 6 |
peritoneal cavity | 2.67e-08 | 6 |
spleen primordium | 2.67e-08 | 6 |
intraembryonic coelom | 8.77e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.06e-07 | 3 |
muscle cancer | 1.06e-07 | 3 |