FFCP PHASE1:Mm9::chr2:25145419..25145455,+: Difference between revisions
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{{FFCP|EntrezGene=227618|HGNC=|MCL_coexpression_id=1186|UniProt=Q91W20|association_with_transcript=0bp_to_ENSMUST00000028337,NM_146117,uc008irg.2_5end|description=CAGE_peak_1_at_Lrrc26_5end|id=chr2:25145419..25145455,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,4.64e-07,9;CL:0002251,4.64e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!3.22e-14!128;UBERON:0001555!3.22e-14!128;UBERON:0007026!3.22e-14!128;UBERON:0005409!3.80e-14!59;UBERON:0004119!5.62e-14!130;UBERON:0000925!5.62e-14!130;UBERON:0006595!5.62e-14!130;UBERON:0004921!4.81e-13!126;UBERON:0004185!4.81e-13!126;UBERON:0000160!4.88e-13!43;UBERON:0000344!2.56e-10!15;UBERON:0001242!8.77e-09!13;UBERON:0000060!8.77e-09!13;UBERON:0001262!8.77e-09!13;UBERON:0004786!8.77e-09!13|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.36e-18,47;UBERON:0000160,2.01e-17,31;UBERON:0000344,6.76e-13,15;UBERON:0001007,7.39e-13,116;UBERON:0001555,7.39e-13,116;UBERON:0007026,7.39e-13,116;UBERON:0004119,2.52e-12,118;UBERON:0000925,2.52e-12,118;UBERON:0006595,2.52e-12,118;UBERON:0004921,1.45e-11,114;UBERON:0001242,6.52e-11,13;UBERON:0001262,6.52e-11,13;UBERON:0004786,6.52e-11,13;UBERON:0005153,1.10e-07,17;UBERON:0005178,1.12e-07,17;UBERON:0005181,1.12e-07,17;UBERON:0002224,1.12e-07,17;UBERON:0000915,1.12e-07,17;UBERON:0008947,1.12e-07,17;UBERON:0003258,1.12e-07,17;UBERON:0003350,4.64e-07,9;UBERON:0004808,4.64e-07,9;UBERON:0001277,4.64e-07,9;UBERON:0007023,8.15e-07,51|phase1_expression=0.640595388419176,7.32848356042658,12.2849794635175,2.11724947914781,4.50806156951712,31.0576653036996,39.7141489012394,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06155844543851,0,0,32.7984466726484,41.9818984352921,12.6331032105304,27.1380057580217,23.4863643627619,71.0687588766838,41.8370015401485,49.445903876133,0,0,0,2.88851619751275,4.82080471539628,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0,0,0,0,0,17.1342192560737,0,0,0,0.563373679106722,0,0,0,6.92771331235885,5.57391704045217,6.57181778519218,12.1034912502204,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,42.8701050801681,0,0.209446706813455,20.4365644166873,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.497627882440372,1.0108910337347,14.0996043443938,0,0,0.180062129805349,1.35634336052144,0.884474488967262,0.640568601424249,1.49922759295566,8.2785078636485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0.308534225774757,0,0,0.116765342367169,0,0,0,0,0,0,0,0,15.8601015832223,10.3135720998782,0,0,0,0.605050573870028,1.55664630691409,4.56541502670142,22.7773949541366,4.44687177754829,6.53471542880701,7.75930240960488,8.18849165900304,13.4822911298133,22.9106332867176,26.6849306160852,0,0,0,0,0,0.140271639780637,0.569128834118316,0.295220295959204,0.31399745568275,0.246794327843601,0.296452627087149,0,0,0,0,0,0,0.863088412352432,0,0,0,0.372140947668503,0.624075346229121,0.252578877947112,0,0,12.0089573608293,0,0,0.169745085775188,1.64283173801951,5.02518772325447,6.66522194480839,14.2447562936193,5.51723004371669,5.53661724121937,6.218735977642,8.1931657357869,12.9513736399422,12.5844680965915,0,0,7.37646409528554,9.65778612066564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.26462195979018,1.24645922567079,1.79175655288934,12.5377293459127,5.30980553359851,0,0,0.188605079755898,0.295301892880773,0.922305443831782,0.775284879504663,0,1.06949213515416,0.632073515871632,1.05418608574999,1.03135543248187,0.680879211507576,0,0,0,0,0.178368817602071,0,0.608929898229199,0.23467170806371,0,3.30792597082443,0.16488625294148,0,0.0603129249281559,0.119372344003136,0.164140899745061,34.3947387223224,0,0,0,0,0,0.136694227721025,0,0,0,0,61.0989195529673,0,1.01659733563424,3.99619761040665,8.15444354456428,7.64268973111622,12.002926828249,17.4398791580459,31.6724689800676,20.2199358335197,163.412239341861,0,0,0,0,0,0,0,0.13020438484395,0,0,0.576060012515731,0.316011120628178,0,0,0.25984164595559,0.358053391334963,0.993406773906324,0.120195449519969,0.295379054349154,0.100966449948148,0.0762068066549998,0.403304740547362,0.487289403698762,0.192423683280659,0.116876902181569,27.4343764174406,0,0,0,8.50034213741638,2.43987218086537,15.7510396869848,12.4333659865858,203.136702134322,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,0.183843508450014,2.00022055021454,1.64828045791115,0.962757628775446,1.26348605881899,2.02783439912192,0.754505365544305,1.03005658216871,1.79270426733634,1.78049953762401,1.42888107384922,1.50649623728312,2.31491064556446,2.47251540481984,1.61918812147837,1.71434626192708,2.30718548007139,1.1921809497366,2.0348498328526,1.78807822789128,1.86152137361688,2.37806364734604,2.10455769150274,2.71608227691724,0.561142271657738,2.01679530811096,1.87158516513571,0.818462086339379,1.70430525304563,1.54325288784913,5.49583271463481,2.10538447600868,4.29742108096597,1.14772999241306,3.52946270591225,0.231867835620421|short_description=p1@Lrrc26}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:227618 | |||
|HGNC= | |||
|MCL_coexpression_id=1186 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q91W20 | |||
|association_with_transcript=0bp_to_ENSMUST00000028337,NM_146117,uc008irg.2_5end | |||
|cluster_id=chr2:25145419..25145455,+ | |||
|description=CAGE_peak_1_at_Lrrc26_5end | |||
|id=chr2:25145419..25145455,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.64e-07,9;CL:0002251,4.64e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!3.22e-14!128;UBERON:0001555!3.22e-14!128;UBERON:0007026!3.22e-14!128;UBERON:0005409!3.80e-14!59;UBERON:0004119!5.62e-14!130;UBERON:0000925!5.62e-14!130;UBERON:0006595!5.62e-14!130;UBERON:0004921!4.81e-13!126;UBERON:0004185!4.81e-13!126;UBERON:0000160!4.88e-13!43;UBERON:0000344!2.56e-10!15;UBERON:0001242!8.77e-09!13;UBERON:0000060!8.77e-09!13;UBERON:0001262!8.77e-09!13;UBERON:0004786!8.77e-09!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.36e-18,47;UBERON:0000160,2.01e-17,31;UBERON:0000344,6.76e-13,15;UBERON:0001007,7.39e-13,116;UBERON:0001555,7.39e-13,116;UBERON:0007026,7.39e-13,116;UBERON:0004119,2.52e-12,118;UBERON:0000925,2.52e-12,118;UBERON:0006595,2.52e-12,118;UBERON:0004921,1.45e-11,114;UBERON:0001242,6.52e-11,13;UBERON:0001262,6.52e-11,13;UBERON:0004786,6.52e-11,13;UBERON:0005153,1.10e-07,17;UBERON:0005178,1.12e-07,17;UBERON:0005181,1.12e-07,17;UBERON:0002224,1.12e-07,17;UBERON:0000915,1.12e-07,17;UBERON:0008947,1.12e-07,17;UBERON:0003258,1.12e-07,17;UBERON:0003350,4.64e-07,9;UBERON:0004808,4.64e-07,9;UBERON:0001277,4.64e-07,9;UBERON:0007023,8.15e-07,51 | |||
|phase1_expression=0.640595388419176,7.32848356042658,12.2849794635175,2.11724947914781,4.50806156951712,31.0576653036996,39.7141489012394,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06155844543851,0,0,32.7984466726484,41.9818984352921,12.6331032105304,27.1380057580217,23.4863643627619,71.0687588766838,41.8370015401485,49.445903876133,0,0,0,2.88851619751275,4.82080471539628,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0,0,0,0,0,17.1342192560737,0,0,0,0.563373679106722,0,0,0,6.92771331235885,5.57391704045217,6.57181778519218,12.1034912502204,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,42.8701050801681,0,0.209446706813455,20.4365644166873,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.497627882440372,1.0108910337347,14.0996043443938,0,0,0.180062129805349,1.35634336052144,0.884474488967262,0.640568601424249,1.49922759295566,8.2785078636485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0.308534225774757,0,0,0.116765342367169,0,0,0,0,0,0,0,0,15.8601015832223,10.3135720998782,0,0,0,0.605050573870028,1.55664630691409,4.56541502670142,22.7773949541366,4.44687177754829,6.53471542880701,7.75930240960488,8.18849165900304,13.4822911298133,22.9106332867176,26.6849306160852,0,0,0,0,0,0.140271639780637,0.569128834118316,0.295220295959204,0.31399745568275,0.246794327843601,0.296452627087149,0,0,0,0,0,0,0.863088412352432,0,0,0,0.372140947668503,0.624075346229121,0.252578877947112,0,0,12.0089573608293,0,0,0.169745085775188,1.64283173801951,5.02518772325447,6.66522194480839,14.2447562936193,5.51723004371669,5.53661724121937,6.218735977642,8.1931657357869,12.9513736399422,12.5844680965915,0,0,7.37646409528554,9.65778612066564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.26462195979018,1.24645922567079,1.79175655288934,12.5377293459127,5.30980553359851,0,0,0.188605079755898,0.295301892880773,0.922305443831782,0.775284879504663,0,1.06949213515416,0.632073515871632,1.05418608574999,1.03135543248187,0.680879211507576,0,0,0,0,0.178368817602071,0,0.608929898229199,0.23467170806371,0,3.30792597082443,0.16488625294148,0,0.0603129249281559,0.119372344003136,0.164140899745061,34.3947387223224,0,0,0,0,0,0.136694227721025,0,0,0,0,61.0989195529673,0,1.01659733563424,3.99619761040665,8.15444354456428,7.64268973111622,12.002926828249,17.4398791580459,31.6724689800676,20.2199358335197,163.412239341861,0,0,0,0,0,0,0,0.13020438484395,0,0,0.576060012515731,0.316011120628178,0,0,0.25984164595559,0.358053391334963,0.993406773906324,0.120195449519969,0.295379054349154,0.100966449948148,0.0762068066549998,0.403304740547362,0.487289403698762,0.192423683280659,0.116876902181569,27.4343764174406,0,0,0,8.50034213741638,2.43987218086537,15.7510396869848,12.4333659865858,203.136702134322,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,0.183843508450014,2.00022055021454,1.64828045791115,0.962757628775446,1.26348605881899,2.02783439912192,0.754505365544305,1.03005658216871,1.79270426733634,1.78049953762401,1.42888107384922,1.50649623728312,2.31491064556446,2.47251540481984,1.61918812147837,1.71434626192708,2.30718548007139,1.1921809497366,2.0348498328526,1.78807822789128,1.86152137361688,2.37806364734604,2.10455769150274,2.71608227691724,0.561142271657738,2.01679530811096,1.87158516513571,0.818462086339379,1.70430525304563,1.54325288784913,5.49583271463481,2.10538447600868,4.29742108096597,1.14772999241306,3.52946270591225,0.231867835620421 | |||
|short_description=p1@Lrrc26 | |||
}} |
Revision as of 20:33, 4 August 2015
Short description: | p1@Lrrc26 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lrrc26_5end |
Coexpression cluster: | MCL_coexpression_mm9:1186 |
Association with transcript: | 0bp_to_ENSMUST00000028337, NM_146117, uc008irg.2_5end |
EntrezGene: | 227618 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.64e-07 | 9 |
epithelial cell of alimentary canal | 4.64e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.36e-18 | 47 |
intestine | 2.01e-17 | 31 |
mucosa | 6.76e-13 | 15 |
digestive system | 7.39e-13 | 116 |
digestive tract | 7.39e-13 | 116 |
primitive gut | 7.39e-13 | 116 |
endoderm-derived structure | 2.52e-12 | 118 |
endoderm | 2.52e-12 | 118 |
presumptive endoderm | 2.52e-12 | 118 |
subdivision of digestive tract | 1.45e-11 | 114 |
intestinal mucosa | 6.52e-11 | 13 |
wall of intestine | 6.52e-11 | 13 |
gastrointestinal system mucosa | 6.52e-11 | 13 |
epithelial bud | 1.10e-07 | 17 |
thoracic cavity element | 1.12e-07 | 17 |
thoracic segment organ | 1.12e-07 | 17 |
thoracic cavity | 1.12e-07 | 17 |
thoracic segment of trunk | 1.12e-07 | 17 |
respiratory primordium | 1.12e-07 | 17 |
endoderm of foregut | 1.12e-07 | 17 |
epithelium of mucosa | 4.64e-07 | 9 |
gastrointestinal system epithelium | 4.64e-07 | 9 |
intestinal epithelium | 4.64e-07 | 9 |
adult organism | 8.15e-07 | 51 |