FFCP PHASE1:Mm9::chr4:130379228..130379250,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1801 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:130379228..130379250,+ | |||
|description=CAGE_peak_at_chr4:130379228..130379250,+ | |description=CAGE_peak_at_chr4:130379228..130379250,+ | ||
|id=chr4:130379228..130379250,+ | |id=chr4:130379228..130379250,+ | ||
|ontology_enrichment_celltype=CL:0000117!6.34e-11!23;CL:0000337!6.34e-11!23;CL:0000393!8.30e-10!39;CL:0000211!8.30e-10!39;CL:0000540!1.42e-09!33;CL:0000047!1.42e-09!33;CL:0000031!1.42e-09!33;CL:0000404!1.42e-09!33;CL:0002319!4.07e-08!43;CL:0000055!5.60e-08!50;CL:0000221!6.41e-08!44;CL:0000133!6.41e-08!44 | |ontology_enrichment_celltype=CL:0000117!6.34e-11!23;CL:0000337!6.34e-11!23;CL:0000393!8.30e-10!39;CL:0000211!8.30e-10!39;CL:0000540!1.42e-09!33;CL:0000047!1.42e-09!33;CL:0000031!1.42e-09!33;CL:0000404!1.42e-09!33;CL:0002319!4.07e-08!43;CL:0000055!5.60e-08!50;CL:0000221!6.41e-08!44;CL:0000133!6.41e-08!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.06e-16,23;CL:0000337,1.06e-16,23;CL:0000393,3.00e-13,39;CL:0000211,3.00e-13,39;CL:0000540,2.52e-12,33;CL:0000047,2.52e-12,33;CL:0000031,2.52e-12,33;CL:0000404,2.52e-12,33;CL:0002319,1.23e-11,43;CL:0000221,3.26e-11,44;CL:0000133,3.26e-11,44;CL:0000723,1.54e-07,91;CL:0000048,1.54e-07,91;CL:0002321,1.96e-07,70;CL:0002194,4.38e-07,4;CL:0000766,4.38e-07,4;CL:0000234,4.38e-07,4;CL:0000576,4.38e-07,4;CL:0000235,4.38e-07,4;CL:0000864,4.38e-07,4;CL:0002009,4.38e-07,4;CL:0000040,4.38e-07,4;CL:0000559,4.38e-07,4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.22e-10!102;UBERON:0000924!2.22e-10!102;UBERON:0006601!2.22e-10!102;UBERON:0000073!7.09e-10!75;UBERON:0001016!7.09e-10!75;UBERON:0001017!1.31e-09!73;UBERON:0005743!1.31e-09!73;UBERON:0002346!1.45e-08!71;UBERON:0003075!1.45e-08!71;UBERON:0007284!1.45e-08!71;UBERON:0000468!6.73e-08!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.42e-09,73;UBERON:0002369,4.54e-09,7;UBERON:0006858,4.54e-09,7;UBERON:0001016,1.01e-08,75;UBERON:0002240,1.30e-08,6;UBERON:0005174,1.30e-08,6;UBERON:0001137,1.30e-08,6;UBERON:0002020,3.47e-08,34;UBERON:0001948,9.03e-08,5;UBERON:0002315,9.03e-08,5;UBERON:0002420,3.86e-07,8;UBERON:0007245,3.86e-07,8;UBERON:0010009,3.86e-07,8;UBERON:0010011,3.86e-07,8;UBERON:0000454,3.86e-07,8 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.157731082679119,0,0.42438965179803,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506884656097573,0.183546752161682,0,0,0,0,0.139986421625363,1.43752564364972,0,0,0,1.80081605225163,2.0057340795713,1.54701627683233,1.61853168687678,4.23192783417626,2.53532561402472,0,0,5.39939830368839,6.92206453796882,13.4991221839759,4.79360176829448,4.99483796918021,0.414758449233911,3.10513658162888,0.841299845405528,3.14216082844184,3.09215957332259,1.10241719293459,1.43768206527355,0.919218786610021,1.10115880999389,0.255374676170375,1.84327839907492,2.50583946687368,5.39777097254217,1.56274011167028,1.67509799400829,1.12552522006336,1.22238598221448,3.83017161115768,3.70166370077668,2.60959224155421,0.605809546665472,0.604572480854284,0,0,0,0,1.94932925234301,0.448026887097336,0.280888840263504,0,1.03914401841148,0.35333957451034,0.281686839553361,0,0,0,0.216491041011214,0,0.505524445014783,0.34255163915718,1.29468941823586,1.92974780784272,1.04091196059682,4.26251669636998,2.30615497256059,2.71300752994721,3.17489509266403,2.13633205260448,0.494389935468748,0.289198713839823,0.884610551949874,0.485300549842228,1.32504911076236,0.969750506270444,0,0.878342391034642,2.93225389538837,0.255457055208591,0,0,0,0.599162557619291,0.457500602818626,1.88481528169297,0.695297280769106,0.511430914660661,0.41557608911912,0.973447578406546,1.12023300235348,0.995255764880744,0.252722758433675,0.210441855886474,0.650602214813519,0,0.180062129805349,0.30140963567143,0.680364991513279,0.512454881139399,0.562210347358373,0,0.431135985865684,0.189106080167819,1.58356011747554,1.09597866213787,0.556094498451196,0.696504333044333,0.61734640922383,0.59710280045548,0,0,0,0.414251545071004,0.703578179943289,1.08037236876609,0,0,0.154267112887378,0.232533944750408,0.268273401399619,0.467061369468678,0.822799249567402,0.492502392237286,0.405344047729279,0.292399974850665,0.658650345873152,0.805238512562231,0.630869845692382,1.74937841044784,0,0,0,0.232236671860439,0,0.605050573870028,0.444756087689741,0,0.949058123089023,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0.648414149624083,0.199141273254367,0.379335801906163,0.685491075658373,0,0.203651327845314,0,0.49095073923223,0.0632365371242573,0.147610147979602,0.156998727841375,0.370191491765402,0,0.500535317148282,0,0.449724224769707,0.202860121388503,0.241177159752417,0.50925170356284,1.15078454980324,1.78348749452539,1.09824565275233,5.75072826109418,0.744281895337007,1.87222603868736,0,0.358794827043824,0.482443521363367,0.923765950833023,0,0.325929952884052,0.339490171550376,0.234690248288502,0.502518772325447,0.476087281772027,0,0.315270288212382,0.44292937929755,0.797273843287435,0.163863314715738,1.38147985492716,0.867894351489069,9.04747703635634,8.15858525728064,0.983528546038072,0.551873492609465,0.481651769963376,0.468846746368813,0.163934945376675,0.252470927204373,0.315508219416257,0.780877488593277,0.861693590931196,0.238968797952552,0.445597348164788,0.283076530788832,1.21443210502468,1.16902343164525,0,0.963963949265421,0.283880170416537,0.534196811001766,0.81443479676788,0.329940245945071,0,0.485561272309963,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0.540183282093931,0.388076051348264,0.428674070063185,0,0.356737635204141,0.658196082408484,2.43571959291679,0.23467170806371,0.21183207086382,0,0.16488625294148,0.322928853391811,0.180938774784468,0,0,0,1.48340241608408,2.22132145037209,1.03193433981611,1.11116716421827,0.188368457004691,0.546776910884101,2.28778173206523,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,0.756037385752609,0.836353184057875,0.436725127492355,0.539457385539283,0.578574190077352,0,0.129614973291793,0,0,1.04661582230785,0.66183396182839,0.388902376688095,0,0.168956125490778,1.40828686374905,0,0,0.241584120826006,0,0.316011120628178,0.202725215290164,0.410843828659309,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0.292373642219257,0,0,0.453460767230423,0,0,0,0.386379188064381,0.750729901804728,0.36630324853453,0.428736758158132,0,0,0.920650473014354,1.71868654031819,1.3748254587495,0.685082519770642,0,0,0.45032120322422,0.453142408984205,0,0,1.59609949360412,0.512200817262403,0.972426868273176,0.209613162627982,0.183843508450014,1.11123363900808,0.412070114477788,0.64183841918363,0,0.25347929989024,0.754505365544305,0.842773567228942,0.512201219238954,0.516919220600519,0,0.811190281613988,0.578727661391115,0,0.588795680537589,1.02860775715625,1.06485483695602,0.715308569841963,0.436039249896986,0.470546902076653,0.592302255241736,0.73171189149109,0.789209134313529,1.08643291076689,0,0.474540072496697,0.689531376628944,0.409231043169689,0.77468420592983,0.192906610981141,2.24829520144151,1.40358965067245,1.07435527024149,1.14772999241306,0.661774257358546,0.463735671240843 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.157731082679119,0,0.42438965179803,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506884656097573,0.183546752161682,0,0,0,0,0.139986421625363,1.43752564364972,0,0,0,1.80081605225163,2.0057340795713,1.54701627683233,1.61853168687678,4.23192783417626,2.53532561402472,0,0,5.39939830368839,6.92206453796882,13.4991221839759,4.79360176829448,4.99483796918021,0.414758449233911,3.10513658162888,0.841299845405528,3.14216082844184,3.09215957332259,1.10241719293459,1.43768206527355,0.919218786610021,1.10115880999389,0.255374676170375,1.84327839907492,2.50583946687368,5.39777097254217,1.56274011167028,1.67509799400829,1.12552522006336,1.22238598221448,3.83017161115768,3.70166370077668,2.60959224155421,0.605809546665472,0.604572480854284,0,0,0,0,1.94932925234301,0.448026887097336,0.280888840263504,0,1.03914401841148,0.35333957451034,0.281686839553361,0,0,0,0.216491041011214,0,0.505524445014783,0.34255163915718,1.29468941823586,1.92974780784272,1.04091196059682,4.26251669636998,2.30615497256059,2.71300752994721,3.17489509266403,2.13633205260448,0.494389935468748,0.289198713839823,0.884610551949874,0.485300549842228,1.32504911076236,0.969750506270444,0,0.878342391034642,2.93225389538837,0.255457055208591,0,0,0,0.599162557619291,0.457500602818626,1.88481528169297,0.695297280769106,0.511430914660661,0.41557608911912,0.973447578406546,1.12023300235348,0.995255764880744,0.252722758433675,0.210441855886474,0.650602214813519,0,0.180062129805349,0.30140963567143,0.680364991513279,0.512454881139399,0.562210347358373,0,0.431135985865684,0.189106080167819,1.58356011747554,1.09597866213787,0.556094498451196,0.696504333044333,0.61734640922383,0.59710280045548,0,0,0,0.414251545071004,0.703578179943289,1.08037236876609,0,0,0.154267112887378,0.232533944750408,0.268273401399619,0.467061369468678,0.822799249567402,0.492502392237286,0.405344047729279,0.292399974850665,0.658650345873152,0.805238512562231,0.630869845692382,1.74937841044784,0,0,0,0.232236671860439,0,0.605050573870028,0.444756087689741,0,0.949058123089023,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0.648414149624083,0.199141273254367,0.379335801906163,0.685491075658373,0,0.203651327845314,0,0.49095073923223,0.0632365371242573,0.147610147979602,0.156998727841375,0.370191491765402,0,0.500535317148282,0,0.449724224769707,0.202860121388503,0.241177159752417,0.50925170356284,1.15078454980324,1.78348749452539,1.09824565275233,5.75072826109418,0.744281895337007,1.87222603868736,0,0.358794827043824,0.482443521363367,0.923765950833023,0,0.325929952884052,0.339490171550376,0.234690248288502,0.502518772325447,0.476087281772027,0,0.315270288212382,0.44292937929755,0.797273843287435,0.163863314715738,1.38147985492716,0.867894351489069,9.04747703635634,8.15858525728064,0.983528546038072,0.551873492609465,0.481651769963376,0.468846746368813,0.163934945376675,0.252470927204373,0.315508219416257,0.780877488593277,0.861693590931196,0.238968797952552,0.445597348164788,0.283076530788832,1.21443210502468,1.16902343164525,0,0.963963949265421,0.283880170416537,0.534196811001766,0.81443479676788,0.329940245945071,0,0.485561272309963,0.302323556964751,0.188605079755898,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0.540183282093931,0.388076051348264,0.428674070063185,0,0.356737635204141,0.658196082408484,2.43571959291679,0.23467170806371,0.21183207086382,0,0.16488625294148,0.322928853391811,0.180938774784468,0,0,0,1.48340241608408,2.22132145037209,1.03193433981611,1.11116716421827,0.188368457004691,0.546776910884101,2.28778173206523,0,0,0,0.954670618015114,0.158167996790568,0.203319467126849,0.756037385752609,0.836353184057875,0.436725127492355,0.539457385539283,0.578574190077352,0,0.129614973291793,0,0,1.04661582230785,0.66183396182839,0.388902376688095,0,0.168956125490778,1.40828686374905,0,0,0.241584120826006,0,0.316011120628178,0.202725215290164,0.410843828659309,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0.292373642219257,0,0,0.453460767230423,0,0,0,0.386379188064381,0.750729901804728,0.36630324853453,0.428736758158132,0,0,0.920650473014354,1.71868654031819,1.3748254587495,0.685082519770642,0,0,0.45032120322422,0.453142408984205,0,0,1.59609949360412,0.512200817262403,0.972426868273176,0.209613162627982,0.183843508450014,1.11123363900808,0.412070114477788,0.64183841918363,0,0.25347929989024,0.754505365544305,0.842773567228942,0.512201219238954,0.516919220600519,0,0.811190281613988,0.578727661391115,0,0.588795680537589,1.02860775715625,1.06485483695602,0.715308569841963,0.436039249896986,0.470546902076653,0.592302255241736,0.73171189149109,0.789209134313529,1.08643291076689,0,0.474540072496697,0.689531376628944,0.409231043169689,0.77468420592983,0.192906610981141,2.24829520144151,1.40358965067245,1.07435527024149,1.14772999241306,0.661774257358546,0.463735671240843 | ||
|short_description=p@chr4:130379228..130379250,+ | |short_description=p@chr4:130379228..130379250,+ | ||
}} | }} |
Latest revision as of 20:21, 4 August 2015
Short description: | p@chr4:130379228..130379250, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:130379228..130379250, + |
Coexpression cluster: | MCL_coexpression_mm9:1801 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.06e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.06e-16 | 23 |
electrically responsive cell | 3.00e-13 | 39 |
electrically active cell | 3.00e-13 | 39 |
neuron | 2.52e-12 | 33 |
neuronal stem cell | 2.52e-12 | 33 |
neuroblast | 2.52e-12 | 33 |
electrically signaling cell | 2.52e-12 | 33 |
neural cell | 1.23e-11 | 43 |
ectodermal cell | 3.26e-11 | 44 |
neurectodermal cell | 3.26e-11 | 44 |
somatic stem cell | 1.54e-07 | 91 |
multi fate stem cell | 1.54e-07 | 91 |
embryonic cell | 1.96e-07 | 70 |
monopoietic cell | 4.38e-07 | 4 |
myeloid leukocyte | 4.38e-07 | 4 |
phagocyte | 4.38e-07 | 4 |
monocyte | 4.38e-07 | 4 |
macrophage | 4.38e-07 | 4 |
tissue-resident macrophage | 4.38e-07 | 4 |
macrophage dendritic cell progenitor | 4.38e-07 | 4 |
monoblast | 4.38e-07 | 4 |
promonocyte | 4.38e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.42e-09 | 73 |
adrenal gland | 4.54e-09 | 7 |
adrenal/interrenal gland | 4.54e-09 | 7 |
nervous system | 1.01e-08 | 75 |
spinal cord | 1.30e-08 | 6 |
dorsal region element | 1.30e-08 | 6 |
dorsum | 1.30e-08 | 6 |
gray matter | 3.47e-08 | 34 |
regional part of spinal cord | 9.03e-08 | 5 |
gray matter of spinal cord | 9.03e-08 | 5 |
basal ganglion | 3.86e-07 | 8 |
nuclear complex of neuraxis | 3.86e-07 | 8 |
aggregate regional part of brain | 3.86e-07 | 8 |
collection of basal ganglia | 3.86e-07 | 8 |
cerebral subcortex | 3.86e-07 | 8 |